Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Ambn-201ENSMUST00000031226 1854 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
Col8a1Q00780 Gm3476-202ENSMUST00000167913 1759 ntAPPRIS P5 TSL 5 BASIC6.5□□□□□ -1.37
Col8a1Q00780 Gm46199-201ENSMUST00000220373 1693 ntBASIC6.5□□□□□ -1.37
Col8a1Q00780 Ighv14-1-201ENSMUST00000103463 351 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Col8a1Q00780 Gm23437-201ENSMUST00000104036 127 ntBASIC6.5□□□□□ -1.37
Col8a1Q00780 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Col8a1Q00780 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Col8a1Q00780 Gm5754-201ENSMUST00000118774 892 ntBASIC6.5□□□□□ -1.37
Col8a1Q00780 Gm11922-201ENSMUST00000118967 475 ntBASIC6.5□□□□□ -1.37
Col8a1Q00780 Gm14300-201ENSMUST00000120800 946 ntBASIC6.5□□□□□ -1.37
Col8a1Q00780 Gm15316-201ENSMUST00000121082 421 ntBASIC6.5□□□□□ -1.37
Col8a1Q00780 Gm8722-201ENSMUST00000121466 769 ntBASIC6.5□□□□□ -1.37
Col8a1Q00780 Gm15696-201ENSMUST00000121730 445 ntBASIC6.5□□□□□ -1.37
Col8a1Q00780 Gm5834-201ENSMUST00000126680 1026 ntBASIC6.5□□□□□ -1.37
Col8a1Q00780 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC6.5□□□□□ -1.37
Col8a1Q00780 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC6.5□□□□□ -1.37
Col8a1Q00780 4930439A04Rik-201ENSMUST00000137241 739 ntTSL 3 BASIC6.5□□□□□ -1.37
Col8a1Q00780 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC6.5□□□□□ -1.37
Col8a1Q00780 Gm371-201ENSMUST00000142240 1245 ntBASIC6.5□□□□□ -1.37
Col8a1Q00780 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Col8a1Q00780 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Col8a1Q00780 Gm25342-201ENSMUST00000157459 122 ntBASIC6.5□□□□□ -1.37
Col8a1Q00780 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC6.5□□□□□ -1.37
Col8a1Q00780 Gm9027-201ENSMUST00000165914 661 ntBASIC6.5□□□□□ -1.37
Col8a1Q00780 Gm22408-201ENSMUST00000174925 65 ntBASIC6.5□□□□□ -1.37
Col8a1Q00780 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Col8a1Q00780 Gm6113-201ENSMUST00000180319 639 ntBASIC6.5□□□□□ -1.37
Col8a1Q00780 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Col8a1Q00780 Gm29016-201ENSMUST00000187523 1013 ntTSL 3 BASIC6.5□□□□□ -1.37
Col8a1Q00780 Gm28117-201ENSMUST00000188472 371 ntBASIC6.5□□□□□ -1.37
Col8a1Q00780 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC6.5□□□□□ -1.37
Col8a1Q00780 Gm37383-201ENSMUST00000191750 745 ntBASIC6.5□□□□□ -1.37
Col8a1Q00780 2010103J01Rik-201ENSMUST00000192375 388 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Col8a1Q00780 Ighv6-2-201ENSMUST00000192430 295 ntBASIC6.5□□□□□ -1.37
Col8a1Q00780 Gm37328-201ENSMUST00000193191 640 ntBASIC6.5□□□□□ -1.37
Col8a1Q00780 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Col8a1Q00780 Gm43711-201ENSMUST00000195994 373 ntBASIC6.5□□□□□ -1.37
Col8a1Q00780 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Col8a1Q00780 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC6.5□□□□□ -1.37
Col8a1Q00780 Vmn2r-ps61-201ENSMUST00000207286 889 ntBASIC6.5□□□□□ -1.37
Col8a1Q00780 Gm35520-201ENSMUST00000209235 784 ntTSL 5 BASIC6.5□□□□□ -1.37
Col8a1Q00780 Gm45666-201ENSMUST00000211474 277 ntTSL 5 BASIC6.5□□□□□ -1.37
Col8a1Q00780 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC6.5□□□□□ -1.37
Col8a1Q00780 Gm19233-201ENSMUST00000219772 936 ntBASIC6.5□□□□□ -1.37
Col8a1Q00780 Platr25-208ENSMUST00000222602 939 ntBASIC6.5□□□□□ -1.37
Col8a1Q00780 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Col8a1Q00780 Gm21731-202ENSMUST00000223770 886 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Col8a1Q00780 AC099612.2-201ENSMUST00000226824 721 ntBASIC6.5□□□□□ -1.37
Col8a1Q00780 AC130673.2-201ENSMUST00000228091 797 ntBASIC6.5□□□□□ -1.37
Col8a1Q00780 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Col8a1Q00780 Olfr1361-201ENSMUST00000055615 954 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Col8a1Q00780 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Col8a1Q00780 Aoah-201ENSMUST00000021757 2921 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Col8a1Q00780 C9-201ENSMUST00000022749 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Col8a1Q00780 Gpm6b-203ENSMUST00000112224 4644 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Col8a1Q00780 Gm29761-201ENSMUST00000215964 1939 ntBASIC6.5□□□□□ -1.37
Col8a1Q00780 St6galnac3-204ENSMUST00000200397 8169 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Col8a1Q00780 Gm44249-201ENSMUST00000204538 1805 ntBASIC6.5□□□□□ -1.37
Col8a1Q00780 Atf2-201ENSMUST00000055833 4210 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Col8a1Q00780 Cdc42bpa-204ENSMUST00000111117 9161 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Col8a1Q00780 Synpo2-201ENSMUST00000051443 3719 ntBASIC6.5□□□□□ -1.37
Col8a1Q00780 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Col8a1Q00780 Gm20609-201ENSMUST00000177104 1527 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Col8a1Q00780 Gm40893-201ENSMUST00000220507 1508 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Col8a1Q00780 Csnk1d-202ENSMUST00000070575 3500 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Col8a1Q00780 Rgs19-206ENSMUST00000108778 1427 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Col8a1Q00780 Ncoa6-202ENSMUST00000109669 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Col8a1Q00780 Gm17076-201ENSMUST00000165185 1401 ntBASIC6.5□□□□□ -1.37
Col8a1Q00780 Rgs19-212ENSMUST00000165416 1427 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Col8a1Q00780 Med12-201ENSMUST00000087948 6809 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Col8a1Q00780 Odf2-202ENSMUST00000046571 3959 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
Col8a1Q00780 Garnl3-202ENSMUST00000102810 3578 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col8a1Q00780 Ptbp3-210ENSMUST00000173699 2721 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Col8a1Q00780 Eif4g2-213ENSMUST00000162415 7995 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Col8a1Q00780 Zmynd11-205ENSMUST00000110636 4117 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col8a1Q00780 Gm43080-201ENSMUST00000199006 2643 ntBASIC6.49□□□□□ -1.37
Col8a1Q00780 Olfr43-204ENSMUST00000215550 1854 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
Col8a1Q00780 AC154461.6-201ENSMUST00000224815 2630 ntBASIC6.49□□□□□ -1.37
Col8a1Q00780 Asxl2-201ENSMUST00000092003 11934 ntTSL 5 BASIC6.49□□□□□ -1.37
Col8a1Q00780 Dclre1b-204ENSMUST00000106834 3705 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Col8a1Q00780 Olfr860-201ENSMUST00000086482 1686 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
Col8a1Q00780 A530017D24Rik-201ENSMUST00000101077 2315 ntTSL 5 BASIC6.49□□□□□ -1.37
Col8a1Q00780 Hrh1-205ENSMUST00000161650 2978 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col8a1Q00780 Gm4961-201ENSMUST00000197982 2249 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Col8a1Q00780 Cebpz-201ENSMUST00000024885 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col8a1Q00780 AC187103.1-201ENSMUST00000224641 1475 ntBASIC6.49□□□□□ -1.37
Col8a1Q00780 Gm44228-201ENSMUST00000204888 2026 ntBASIC6.49□□□□□ -1.37
Col8a1Q00780 Olfr744-202ENSMUST00000213668 2583 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Col8a1Q00780 AW822252-205ENSMUST00000192662 1352 ntBASIC6.49□□□□□ -1.37
Col8a1Q00780 AC154747.4-203ENSMUST00000225893 1384 ntBASIC6.49□□□□□ -1.37
Col8a1Q00780 Gm9597-202ENSMUST00000227632 1387 ntBASIC6.49□□□□□ -1.37
Col8a1Q00780 Fam126b-202ENSMUST00000097724 4581 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Col8a1Q00780 Olfr97-206ENSMUST00000216225 1847 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Col8a1Q00780 Nyap2-205ENSMUST00000137862 3393 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Col8a1Q00780 Dkc1-201ENSMUST00000033776 2804 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col8a1Q00780 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col8a1Q00780 Ighv14-4-201ENSMUST00000103475 333 ntAPPRIS ALT2 BASIC6.49□□□□□ -1.37
Col8a1Q00780 Gm25877-201ENSMUST00000104326 129 ntBASIC6.49□□□□□ -1.37
Col8a1Q00780 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Col8a1Q00780 Hspe1-ps4-201ENSMUST00000119538 286 ntBASIC6.49□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms