Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC6.13□□□□□ -1.43
Nkx3-1P97436 Gm29571-201ENSMUST00000191547 1909 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Nkx3-1P97436 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Nkx3-1P97436 Aox4-201ENSMUST00000040442 4973 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Nkx3-1P97436 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Nkx3-1P97436 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Nkx3-1P97436 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Nkx3-1P97436 Gm13619-201ENSMUST00000155722 2138 ntTSL 2 BASIC6.13□□□□□ -1.43
Nkx3-1P97436 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Nkx3-1P97436 Lilra6-204ENSMUST00000206077 2281 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Nkx3-1P97436 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Nkx3-1P97436 Ighv14-4-201ENSMUST00000103475 333 ntAPPRIS ALT2 BASIC6.13□□□□□ -1.43
Nkx3-1P97436 Gm14729-201ENSMUST00000118373 689 ntBASIC6.13□□□□□ -1.43
Nkx3-1P97436 Gm5601-201ENSMUST00000118909 972 ntBASIC6.13□□□□□ -1.43
Nkx3-1P97436 Gm12175-201ENSMUST00000122081 345 ntBASIC6.13□□□□□ -1.43
Nkx3-1P97436 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC6.13□□□□□ -1.43
Nkx3-1P97436 Gm15845-201ENSMUST00000130244 996 ntTSL 2 BASIC6.13□□□□□ -1.43
Nkx3-1P97436 Stau2-209ENSMUST00000145092 564 ntTSL 5 BASIC6.13□□□□□ -1.43
Nkx3-1P97436 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC6.13□□□□□ -1.43
Nkx3-1P97436 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC6.13□□□□□ -1.43
Nkx3-1P97436 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Nkx3-1P97436 Gm17059-201ENSMUST00000168284 519 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Nkx3-1P97436 Gm7289-201ENSMUST00000168993 734 ntBASIC6.13□□□□□ -1.43
Nkx3-1P97436 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Nkx3-1P97436 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC6.13□□□□□ -1.43
Nkx3-1P97436 Gm8357-201ENSMUST00000181115 1011 ntBASIC6.13□□□□□ -1.43
Nkx3-1P97436 Mir8097-201ENSMUST00000185150 119 ntBASIC6.13□□□□□ -1.43
Nkx3-1P97436 Gm28991-201ENSMUST00000186584 543 ntTSL 5 BASIC6.13□□□□□ -1.43
Nkx3-1P97436 1700012I11Rik-201ENSMUST00000187233 1039 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Nkx3-1P97436 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Nkx3-1P97436 Gm28801-201ENSMUST00000188761 449 ntBASIC6.13□□□□□ -1.43
Nkx3-1P97436 Gm28428-201ENSMUST00000188886 697 ntBASIC6.13□□□□□ -1.43
Nkx3-1P97436 Gm7867-201ENSMUST00000189856 546 ntBASIC6.13□□□□□ -1.43
Nkx3-1P97436 Gm37295-201ENSMUST00000192186 109 ntBASIC6.13□□□□□ -1.43
Nkx3-1P97436 Gm7019-201ENSMUST00000194122 369 ntBASIC6.13□□□□□ -1.43
Nkx3-1P97436 4930533L02Rik-201ENSMUST00000194425 1160 ntBASIC6.13□□□□□ -1.43
Nkx3-1P97436 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC6.13□□□□□ -1.43
Nkx3-1P97436 Gm35024-201ENSMUST00000213359 972 ntTSL 5 BASIC6.13□□□□□ -1.43
Nkx3-1P97436 AC153847.1-201ENSMUST00000214524 353 ntBASIC6.13□□□□□ -1.43
Nkx3-1P97436 Gm40797-201ENSMUST00000219762 385 ntTSL 2 BASIC6.13□□□□□ -1.43
Nkx3-1P97436 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC6.13□□□□□ -1.43
Nkx3-1P97436 Gm18955-201ENSMUST00000223173 649 ntBASIC6.13□□□□□ -1.43
Nkx3-1P97436 9230112D13Rik-201ENSMUST00000022325 778 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Nkx3-1P97436 AC114008.1-201ENSMUST00000226193 937 ntBASIC6.13□□□□□ -1.43
Nkx3-1P97436 AC154324.1-201ENSMUST00000226711 814 ntBASIC6.13□□□□□ -1.43
Nkx3-1P97436 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Nkx3-1P97436 Olfr1342-201ENSMUST00000060562 1002 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Nkx3-1P97436 Gm5528-201ENSMUST00000076314 480 ntBASIC6.13□□□□□ -1.43
Nkx3-1P97436 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Nkx3-1P97436 Gm29486-201ENSMUST00000088648 372 ntBASIC6.13□□□□□ -1.43
Nkx3-1P97436 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Nkx3-1P97436 Gm28173-201ENSMUST00000191190 1496 ntTSL 5 BASIC6.13□□□□□ -1.43
Nkx3-1P97436 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC6.13□□□□□ -1.43
Nkx3-1P97436 Gm9874-202ENSMUST00000194957 1464 ntBASIC6.13□□□□□ -1.43
Nkx3-1P97436 Gm5454-201ENSMUST00000052030 1453 ntBASIC6.13□□□□□ -1.43
Nkx3-1P97436 Olfr1388-202ENSMUST00000215226 3034 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Nkx3-1P97436 4930516K23Rik-201ENSMUST00000074064 6133 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Nkx3-1P97436 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Nkx3-1P97436 2610203C20Rik-215ENSMUST00000212373 1574 ntTSL 5 BASIC6.13□□□□□ -1.43
Nkx3-1P97436 Gm10862-201ENSMUST00000193956 3350 ntBASIC6.13□□□□□ -1.43
Nkx3-1P97436 Olfr961-202ENSMUST00000219295 3374 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Nkx3-1P97436 Gm45112-201ENSMUST00000208576 5125 ntBASIC6.13□□□□□ -1.43
Nkx3-1P97436 Olfr525-202ENSMUST00000214594 5137 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Nkx3-1P97436 Zfp663-202ENSMUST00000103085 3451 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Nkx3-1P97436 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Nkx3-1P97436 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Nkx3-1P97436 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Nkx3-1P97436 Gm44898-201ENSMUST00000205934 2223 ntBASIC6.13□□□□□ -1.43
Nkx3-1P97436 Olfr212-203ENSMUST00000220134 2349 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Nkx3-1P97436 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Nkx3-1P97436 Klf10-202ENSMUST00000226363 2917 ntBASIC6.12□□□□□ -1.43
Nkx3-1P97436 Gm37043-201ENSMUST00000194609 3105 ntBASIC6.12□□□□□ -1.43
Nkx3-1P97436 Adamts6-203ENSMUST00000224208 6480 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Nkx3-1P97436 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
Nkx3-1P97436 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Nkx3-1P97436 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Nkx3-1P97436 Stk26-202ENSMUST00000114887 3173 ntTSL 5 BASIC6.12□□□□□ -1.43
Nkx3-1P97436 Gm12740-201ENSMUST00000118794 308 ntBASIC6.12□□□□□ -1.43
Nkx3-1P97436 Gm14847-201ENSMUST00000121978 519 ntBASIC6.12□□□□□ -1.43
Nkx3-1P97436 4933421A08Rik-201ENSMUST00000135313 1638 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Nkx3-1P97436 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC6.12□□□□□ -1.43
Nkx3-1P97436 Gm22223-201ENSMUST00000157360 125 ntBASIC6.12□□□□□ -1.43
Nkx3-1P97436 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC6.12□□□□□ -1.43
Nkx3-1P97436 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC6.12□□□□□ -1.43
Nkx3-1P97436 Gm4202-201ENSMUST00000169025 733 ntBASIC6.12□□□□□ -1.43
Nkx3-1P97436 Gm3344-201ENSMUST00000169610 603 ntBASIC6.12□□□□□ -1.43
Nkx3-1P97436 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Nkx3-1P97436 Mir3078-201ENSMUST00000175231 87 ntBASIC6.12□□□□□ -1.43
Nkx3-1P97436 Gm24812-201ENSMUST00000175315 284 ntBASIC6.12□□□□□ -1.43
Nkx3-1P97436 Gm24756-201ENSMUST00000177002 96 ntBASIC6.12□□□□□ -1.43
Nkx3-1P97436 Gm7426-201ENSMUST00000179046 404 ntBASIC6.12□□□□□ -1.43
Nkx3-1P97436 Gm26849-201ENSMUST00000180561 1842 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Nkx3-1P97436 Gm10136-201ENSMUST00000183196 435 ntBASIC6.12□□□□□ -1.43
Nkx3-1P97436 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Nkx3-1P97436 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC6.12□□□□□ -1.43
Nkx3-1P97436 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC6.12□□□□□ -1.43
Nkx3-1P97436 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC6.12□□□□□ -1.43
Nkx3-1P97436 Gm38256-201ENSMUST00000192097 950 ntTSL 5 BASIC6.12□□□□□ -1.43
Nkx3-1P97436 Gm37556-201ENSMUST00000193877 468 ntTSL 5 BASIC6.12□□□□□ -1.43
Nkx3-1P97436 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms