Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC7.64□□□□□ -1.19
CiitaP79621 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC7.64□□□□□ -1.19
CiitaP79621 Gm11697-201ENSMUST00000149226 525 ntTSL 2 BASIC7.64□□□□□ -1.19
CiitaP79621 Gm15819-201ENSMUST00000153089 481 ntTSL 2 BASIC7.64□□□□□ -1.19
CiitaP79621 Gm25617-201ENSMUST00000179548 133 ntBASIC7.64□□□□□ -1.19
CiitaP79621 Mir7033-201ENSMUST00000184259 81 ntBASIC7.64□□□□□ -1.19
CiitaP79621 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC7.64□□□□□ -1.19
CiitaP79621 Gm29016-201ENSMUST00000187523 1013 ntTSL 3 BASIC7.64□□□□□ -1.19
CiitaP79621 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC7.64□□□□□ -1.19
CiitaP79621 Gm25617-202ENSMUST00000198387 132 ntBASIC7.64□□□□□ -1.19
CiitaP79621 Gm42963-201ENSMUST00000202943 1217 ntBASIC7.64□□□□□ -1.19
CiitaP79621 Gm8479-201ENSMUST00000203825 718 ntBASIC7.64□□□□□ -1.19
CiitaP79621 Gm45279-201ENSMUST00000210315 391 ntBASIC7.64□□□□□ -1.19
CiitaP79621 AC153847.1-201ENSMUST00000214524 353 ntBASIC7.64□□□□□ -1.19
CiitaP79621 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CiitaP79621 AC154640.3-201ENSMUST00000227492 846 ntBASIC7.64□□□□□ -1.19
CiitaP79621 Olfr303-201ENSMUST00000053958 1040 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
CiitaP79621 Olfr299-201ENSMUST00000057734 993 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
CiitaP79621 Olfr399-201ENSMUST00000059440 1003 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
CiitaP79621 Olfr239-203ENSMUST00000214406 3773 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
CiitaP79621 Usp40-201ENSMUST00000040783 5049 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
CiitaP79621 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CiitaP79621 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC7.64□□□□□ -1.19
CiitaP79621 Olfr417-202ENSMUST00000217962 5662 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
CiitaP79621 Pmfbp1-201ENSMUST00000034162 3396 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CiitaP79621 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CiitaP79621 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CiitaP79621 Ect2-207ENSMUST00000176242 3985 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
CiitaP79621 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC7.64□□□□□ -1.19
CiitaP79621 Gm18248-201ENSMUST00000191164 1846 ntBASIC7.64□□□□□ -1.19
CiitaP79621 Zbtb6-201ENSMUST00000053098 4535 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CiitaP79621 Gm45902-201ENSMUST00000124331 4314 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CiitaP79621 Kel-201ENSMUST00000031899 2530 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CiitaP79621 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
CiitaP79621 Gm29670-201ENSMUST00000190228 2491 ntBASIC7.63□□□□□ -1.19
CiitaP79621 B830042I05Rik-201ENSMUST00000208333 1620 ntTSL 5 BASIC7.63□□□□□ -1.19
CiitaP79621 Olfr1364-203ENSMUST00000213912 3119 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
CiitaP79621 Phactr4-202ENSMUST00000084249 2349 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
CiitaP79621 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CiitaP79621 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC7.63□□□□□ -1.19
CiitaP79621 CT010514.1-201ENSMUST00000214088 2969 ntBASIC7.63□□□□□ -1.19
CiitaP79621 Eps15-201ENSMUST00000030281 2980 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CiitaP79621 Itih3-201ENSMUST00000006697 2992 ntAPPRIS P2 TSL 5 BASIC7.63□□□□□ -1.19
CiitaP79621 Gm37364-201ENSMUST00000192533 3920 ntBASIC7.63□□□□□ -1.19
CiitaP79621 Gm13141-201ENSMUST00000117417 456 ntBASIC7.63□□□□□ -1.19
CiitaP79621 Gm13732-201ENSMUST00000117753 535 ntBASIC7.63□□□□□ -1.19
CiitaP79621 Gm14893-201ENSMUST00000117904 282 ntBASIC7.63□□□□□ -1.19
CiitaP79621 Gm12583-201ENSMUST00000120677 853 ntBASIC7.63□□□□□ -1.19
CiitaP79621 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC7.63□□□□□ -1.19
CiitaP79621 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
CiitaP79621 Gm10130-201ENSMUST00000133235 303 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
CiitaP79621 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CiitaP79621 Gm23617-201ENSMUST00000175410 95 ntBASIC7.63□□□□□ -1.19
CiitaP79621 Gm20637-201ENSMUST00000175715 462 ntBASIC7.63□□□□□ -1.19
CiitaP79621 Gm4956-202ENSMUST00000178869 672 ntBASIC7.63□□□□□ -1.19
CiitaP79621 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC7.63□□□□□ -1.19
CiitaP79621 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC7.63□□□□□ -1.19
CiitaP79621 Gm29099-201ENSMUST00000187370 760 ntTSL 5 BASIC7.63□□□□□ -1.19
CiitaP79621 Gm4856-201ENSMUST00000192696 1091 ntBASIC7.63□□□□□ -1.19
CiitaP79621 Gm43786-202ENSMUST00000202157 616 ntTSL 3 BASIC7.63□□□□□ -1.19
CiitaP79621 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC7.63□□□□□ -1.19
CiitaP79621 Mrpl42-202ENSMUST00000217777 455 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CiitaP79621 Gm9231-201ENSMUST00000220817 1009 ntBASIC7.63□□□□□ -1.19
CiitaP79621 AC138765.3-201ENSMUST00000227981 423 ntBASIC7.63□□□□□ -1.19
CiitaP79621 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
CiitaP79621 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
CiitaP79621 Olfr1306-201ENSMUST00000099607 939 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
CiitaP79621 Nol8-205ENSMUST00000222197 4368 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
CiitaP79621 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC7.63□□□□□ -1.19
CiitaP79621 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
CiitaP79621 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
CiitaP79621 Gm9030-201ENSMUST00000218405 2410 ntBASIC7.63□□□□□ -1.19
CiitaP79621 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
CiitaP79621 Gm9029-201ENSMUST00000219232 2410 ntBASIC7.63□□□□□ -1.19
CiitaP79621 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
CiitaP79621 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
CiitaP79621 Olfr295-202ENSMUST00000215365 6013 ntAPPRIS P1 TSL 3 BASIC7.63□□□□□ -1.19
CiitaP79621 Kcnj15-205ENSMUST00000113858 5309 ntTSL 5 BASIC7.63□□□□□ -1.19
CiitaP79621 Usp8-201ENSMUST00000028841 4145 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
CiitaP79621 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CiitaP79621 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
CiitaP79621 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
CiitaP79621 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CiitaP79621 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CiitaP79621 Olfr60-203ENSMUST00000211031 2650 ntAPPRIS P1 TSL 3 BASIC7.63□□□□□ -1.19
CiitaP79621 Olfr60-204ENSMUST00000215023 2692 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
CiitaP79621 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
CiitaP79621 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
CiitaP79621 Arhgef12-201ENSMUST00000072767 10059 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
CiitaP79621 Gm37138-201ENSMUST00000194564 2089 ntBASIC7.63□□□□□ -1.19
CiitaP79621 Olfr266-203ENSMUST00000216610 1520 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
CiitaP79621 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC7.62□□□□□ -1.19
CiitaP79621 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
CiitaP79621 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
CiitaP79621 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC7.62□□□□□ -1.19
CiitaP79621 AC158537.1-201ENSMUST00000224637 1711 ntBASIC7.62□□□□□ -1.19
CiitaP79621 Gm9311-201ENSMUST00000118042 1269 ntBASIC7.62□□□□□ -1.19
CiitaP79621 Gm11622-201ENSMUST00000120525 691 ntBASIC7.62□□□□□ -1.19
CiitaP79621 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC7.62□□□□□ -1.19
CiitaP79621 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC7.62□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 118.6 ms