Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm24286-201ENSMUST00000157632 128 ntBASIC7.53□□□□□ -1.2
Shmt1P50431 Gm22094-201ENSMUST00000158976 117 ntBASIC7.53□□□□□ -1.2
Shmt1P50431 Gm17022-201ENSMUST00000166415 922 ntBASIC7.53□□□□□ -1.2
Shmt1P50431 Svs6-201ENSMUST00000017144 535 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Shmt1P50431 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC7.53□□□□□ -1.2
Shmt1P50431 Ptrhd1-201ENSMUST00000179139 3840 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Shmt1P50431 Gm26671-201ENSMUST00000180423 1157 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Shmt1P50431 Mir8120-201ENSMUST00000185035 139 ntBASIC7.53□□□□□ -1.2
Shmt1P50431 Gm8641-201ENSMUST00000186995 826 ntBASIC7.53□□□□□ -1.2
Shmt1P50431 Gm9127-201ENSMUST00000188041 985 ntBASIC7.53□□□□□ -1.2
Shmt1P50431 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Shmt1P50431 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Shmt1P50431 Gm7412-201ENSMUST00000191692 605 ntBASIC7.53□□□□□ -1.2
Shmt1P50431 Gm37641-201ENSMUST00000193837 239 ntBASIC7.53□□□□□ -1.2
Shmt1P50431 Ighv1-29-201ENSMUST00000194116 342 ntBASIC7.53□□□□□ -1.2
Shmt1P50431 Gm24826-202ENSMUST00000197298 216 ntBASIC7.53□□□□□ -1.2
Shmt1P50431 Gm4525-201ENSMUST00000198831 254 ntBASIC7.53□□□□□ -1.2
Shmt1P50431 Gm43531-201ENSMUST00000200676 1114 ntBASIC7.53□□□□□ -1.2
Shmt1P50431 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC7.53□□□□□ -1.2
Shmt1P50431 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Shmt1P50431 Gm10126-201ENSMUST00000221732 168 ntBASIC7.53□□□□□ -1.2
Shmt1P50431 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC7.53□□□□□ -1.2
Shmt1P50431 AC118006.2-201ENSMUST00000224167 962 ntBASIC7.53□□□□□ -1.2
Shmt1P50431 AC164597.1-201ENSMUST00000226538 514 ntBASIC7.53□□□□□ -1.2
Shmt1P50431 AC115304.1-202ENSMUST00000226850 837 ntBASIC7.53□□□□□ -1.2
Shmt1P50431 AC102676.1-201ENSMUST00000228131 719 ntBASIC7.53□□□□□ -1.2
Shmt1P50431 Serpina3c-201ENSMUST00000085050 2213 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Shmt1P50431 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Shmt1P50431 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Shmt1P50431 Nr1h5-203ENSMUST00000196983 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Shmt1P50431 CT010470.1-201ENSMUST00000225364 1876 ntBASIC7.53□□□□□ -1.2
Shmt1P50431 Stab2-201ENSMUST00000035288 8228 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Shmt1P50431 Gm42577-201ENSMUST00000201367 3211 ntBASIC7.53□□□□□ -1.2
Shmt1P50431 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Shmt1P50431 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Shmt1P50431 Mkl2-204ENSMUST00000149359 8295 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
Shmt1P50431 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Shmt1P50431 AC158986.1-201ENSMUST00000228391 3455 ntBASIC7.53□□□□□ -1.2
Shmt1P50431 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
Shmt1P50431 Gm28965-201ENSMUST00000186015 1500 ntTSL 5 BASIC7.52□□□□□ -1.2
Shmt1P50431 Gm42996-201ENSMUST00000196116 1636 ntBASIC7.52□□□□□ -1.2
Shmt1P50431 AC122769.1-201ENSMUST00000226930 1714 ntBASIC7.52□□□□□ -1.2
Shmt1P50431 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Shmt1P50431 Hps5-203ENSMUST00000107654 4422 ntAPPRIS P3 TSL 5 BASIC7.52□□□□□ -1.21
Shmt1P50431 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Shmt1P50431 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Shmt1P50431 AC156645.1-201ENSMUST00000223066 5194 ntBASIC7.52□□□□□ -1.21
Shmt1P50431 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Shmt1P50431 Casr-203ENSMUST00000172826 3659 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Shmt1P50431 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Shmt1P50431 Gm28333-201ENSMUST00000186034 2168 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Shmt1P50431 Gm28315-201ENSMUST00000189948 2168 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Shmt1P50431 Pik3c2g-212ENSMUST00000190962 1774 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Shmt1P50431 Exoc4-201ENSMUST00000052266 4824 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Shmt1P50431 Gm38325-201ENSMUST00000194507 1377 ntBASIC7.52□□□□□ -1.21
Shmt1P50431 Gm16149-201ENSMUST00000117631 309 ntBASIC7.52□□□□□ -1.21
Shmt1P50431 Gm12740-201ENSMUST00000118794 308 ntBASIC7.52□□□□□ -1.21
Shmt1P50431 Gm15129-201ENSMUST00000119673 279 ntBASIC7.52□□□□□ -1.21
Shmt1P50431 Gm14202-201ENSMUST00000120121 311 ntBASIC7.52□□□□□ -1.21
Shmt1P50431 Gm14531-201ENSMUST00000120845 285 ntBASIC7.52□□□□□ -1.21
Shmt1P50431 Gm22275-201ENSMUST00000122470 310 ntBASIC7.52□□□□□ -1.21
Shmt1P50431 Gm25178-201ENSMUST00000122633 325 ntBASIC7.52□□□□□ -1.21
Shmt1P50431 Gm22552-201ENSMUST00000157796 337 ntBASIC7.52□□□□□ -1.21
Shmt1P50431 Gm26025-201ENSMUST00000158655 271 ntBASIC7.52□□□□□ -1.21
Shmt1P50431 Gm26528-201ENSMUST00000181965 283 ntBASIC7.52□□□□□ -1.21
Shmt1P50431 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Shmt1P50431 Gm21301-201ENSMUST00000189476 699 ntBASIC7.52□□□□□ -1.21
Shmt1P50431 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Shmt1P50431 Gm8924-201ENSMUST00000197405 1132 ntBASIC7.52□□□□□ -1.21
Shmt1P50431 Gm2860-201ENSMUST00000199226 707 ntBASIC7.52□□□□□ -1.21
Shmt1P50431 Gm21040-201ENSMUST00000199493 1132 ntBASIC7.52□□□□□ -1.21
Shmt1P50431 Gm43725-201ENSMUST00000200122 369 ntBASIC7.52□□□□□ -1.21
Shmt1P50431 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Shmt1P50431 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC7.52□□□□□ -1.21
Shmt1P50431 AC131660.1-201ENSMUST00000215630 1062 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Shmt1P50431 Gm18329-201ENSMUST00000215832 589 ntBASIC7.52□□□□□ -1.21
Shmt1P50431 Gm21089-201ENSMUST00000215843 325 ntBASIC7.52□□□□□ -1.21
Shmt1P50431 Gm9110-201ENSMUST00000219035 617 ntBASIC7.52□□□□□ -1.21
Shmt1P50431 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Shmt1P50431 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC7.52□□□□□ -1.21
Shmt1P50431 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Shmt1P50431 CT009728.1-201ENSMUST00000225228 1050 ntBASIC7.52□□□□□ -1.21
Shmt1P50431 AC154380.1-201ENSMUST00000226804 720 ntBASIC7.52□□□□□ -1.21
Shmt1P50431 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Shmt1P50431 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Shmt1P50431 Sspo-206ENSMUST00000212740 15408 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
Shmt1P50431 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Shmt1P50431 AC129308.1-201ENSMUST00000223800 2309 ntBASIC7.52□□□□□ -1.21
Shmt1P50431 Gmeb1-203ENSMUST00000105965 4632 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Shmt1P50431 Alcam-207ENSMUST00000170035 1917 ntTSL 5 BASIC7.52□□□□□ -1.21
Shmt1P50431 Olfr449-204ENSMUST00000214687 1921 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
Shmt1P50431 Txlnb-201ENSMUST00000037964 4422 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Shmt1P50431 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Shmt1P50431 Olfr1555-ps1-201ENSMUST00000207679 2791 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Shmt1P50431 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Shmt1P50431 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Shmt1P50431 Vmn2r52-201ENSMUST00000164918 2559 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Shmt1P50431 Vmn2r-ps159-202ENSMUST00000096792 2574 ntBASIC7.52□□□□□ -1.21
Shmt1P50431 Gm38009-201ENSMUST00000194884 3341 ntBASIC7.52□□□□□ -1.21
Shmt1P50431 AI314278-202ENSMUST00000209026 2373 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms