Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm25320-201ENSMUST00000122551 324 ntBASIC8.85□□□□□ -0.99
Rfx1P48377 Gm40614-201ENSMUST00000125161 1254 ntTSL 5 BASIC8.85□□□□□ -0.99
Rfx1P48377 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Rfx1P48377 Rsrc1-209ENSMUST00000162693 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Rfx1P48377 Gm9359-201ENSMUST00000163721 1221 ntBASIC8.85□□□□□ -0.99
Rfx1P48377 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Rfx1P48377 D7Ertd128e-201ENSMUST00000189744 928 ntTSL 2 BASIC8.85□□□□□ -0.99
Rfx1P48377 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC8.85□□□□□ -0.99
Rfx1P48377 Gm6394-201ENSMUST00000197077 477 ntBASIC8.85□□□□□ -0.99
Rfx1P48377 Iglc1-201ENSMUST00000200568 454 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Rfx1P48377 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Rfx1P48377 4930557K07Rik-201ENSMUST00000205110 363 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Rfx1P48377 Olfr696-ps1-201ENSMUST00000207160 948 ntBASIC8.85□□□□□ -0.99
Rfx1P48377 Gm45145-203ENSMUST00000208872 958 ntTSL 5 BASIC8.85□□□□□ -0.99
Rfx1P48377 Rps25-205ENSMUST00000216867 577 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Rfx1P48377 2900045O20Rik-201ENSMUST00000218374 1292 ntTSL 2 BASIC8.85□□□□□ -0.99
Rfx1P48377 Gm36827-201ENSMUST00000220080 1249 ntTSL 5 BASIC8.85□□□□□ -0.99
Rfx1P48377 AC100209.1-201ENSMUST00000225562 409 ntBASIC8.85□□□□□ -0.99
Rfx1P48377 Olfr672-201ENSMUST00000050599 939 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Rfx1P48377 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Rfx1P48377 Plch1-210ENSMUST00000162269 6539 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Rfx1P48377 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Rfx1P48377 Gm18313-201ENSMUST00000221036 1784 ntBASIC8.85□□□□□ -0.99
Rfx1P48377 Lipf-201ENSMUST00000025680 1411 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Rfx1P48377 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Rfx1P48377 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Rfx1P48377 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Rfx1P48377 Myrfl-201ENSMUST00000048229 3164 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Rfx1P48377 AC122408.2-201ENSMUST00000217901 1391 ntBASIC8.85□□□□□ -0.99
Rfx1P48377 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC8.85□□□□□ -0.99
Rfx1P48377 Calcrl-201ENSMUST00000074262 4882 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Rfx1P48377 Gm37163-201ENSMUST00000195439 1690 ntBASIC8.85□□□□□ -0.99
Rfx1P48377 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Rfx1P48377 Gm38380-201ENSMUST00000195718 2248 ntBASIC8.84□□□□□ -0.99
Rfx1P48377 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Rfx1P48377 Gm16409-201ENSMUST00000100510 747 ntBASIC8.84□□□□□ -0.99
Rfx1P48377 Ccdc163-203ENSMUST00000106463 1159 ntAPPRIS P2 TSL 5 BASIC8.84□□□□□ -0.99
Rfx1P48377 Cisd3-202ENSMUST00000107584 546 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Rfx1P48377 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Rfx1P48377 Gm6181-201ENSMUST00000117187 264 ntBASIC8.84□□□□□ -0.99
Rfx1P48377 Gm13731-201ENSMUST00000117332 196 ntBASIC8.84□□□□□ -0.99
Rfx1P48377 Gm15576-201ENSMUST00000117806 583 ntBASIC8.84□□□□□ -0.99
Rfx1P48377 Rps6-ps4-201ENSMUST00000118499 750 ntBASIC8.84□□□□□ -0.99
Rfx1P48377 Gm11907-201ENSMUST00000118918 1007 ntBASIC8.84□□□□□ -0.99
Rfx1P48377 Gm9143-201ENSMUST00000120745 745 ntBASIC8.84□□□□□ -0.99
Rfx1P48377 Gm8172-201ENSMUST00000120762 750 ntBASIC8.84□□□□□ -0.99
Rfx1P48377 Cyp4a30-ps-201ENSMUST00000120813 1020 ntBASIC8.84□□□□□ -0.99
Rfx1P48377 Gm15006-201ENSMUST00000121419 1122 ntBASIC8.84□□□□□ -0.99
Rfx1P48377 n-R5s76-201ENSMUST00000122700 113 ntBASIC8.84□□□□□ -0.99
Rfx1P48377 Gm14764-201ENSMUST00000147130 313 ntTSL 5 BASIC8.84□□□□□ -0.99
Rfx1P48377 Gm24960-201ENSMUST00000157923 90 ntBASIC8.84□□□□□ -0.99
Rfx1P48377 Gm25413-201ENSMUST00000158544 312 ntBASIC8.84□□□□□ -0.99
Rfx1P48377 Gm10804-202ENSMUST00000162565 867 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Rfx1P48377 Gm6611-201ENSMUST00000163830 1272 ntBASIC8.84□□□□□ -0.99
Rfx1P48377 Lgals1-ps2-201ENSMUST00000170221 519 ntBASIC8.84□□□□□ -0.99
Rfx1P48377 Gm8167-201ENSMUST00000183320 958 ntBASIC8.84□□□□□ -0.99
Rfx1P48377 Vis1-201ENSMUST00000183957 201 ntBASIC8.84□□□□□ -0.99
Rfx1P48377 Gm38289-201ENSMUST00000194273 597 ntTSL 5 BASIC8.84□□□□□ -0.99
Rfx1P48377 Gm9256-201ENSMUST00000198106 1420 ntBASIC8.84□□□□□ -0.99
Rfx1P48377 Gm18748-201ENSMUST00000198507 622 ntBASIC8.84□□□□□ -0.99
Rfx1P48377 Gm45382-201ENSMUST00000210607 151 ntBASIC8.84□□□□□ -0.99
Rfx1P48377 Gm45782-201ENSMUST00000212670 366 ntBASIC8.84□□□□□ -0.99
Rfx1P48377 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC8.84□□□□□ -0.99
Rfx1P48377 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Rfx1P48377 AC140409.4-201ENSMUST00000215757 538 ntBASIC8.84□□□□□ -0.99
Rfx1P48377 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC8.84□□□□□ -0.99
Rfx1P48377 AC154760.1-201ENSMUST00000227218 673 ntBASIC8.84□□□□□ -0.99
Rfx1P48377 AC154239.2-201ENSMUST00000227859 233 ntBASIC8.84□□□□□ -0.99
Rfx1P48377 AC154627.1-201ENSMUST00000228799 1286 ntBASIC8.84□□□□□ -0.99
Rfx1P48377 1700024P04Rik-201ENSMUST00000054425 481 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Rfx1P48377 Olfr1323-201ENSMUST00000057071 930 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Rfx1P48377 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Rfx1P48377 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Rfx1P48377 Iba57-202ENSMUST00000069631 864 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Rfx1P48377 Chn1-201ENSMUST00000070579 1023 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Rfx1P48377 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Rfx1P48377 Olfr836-201ENSMUST00000074986 955 ntAPPRIS P2 BASIC8.84□□□□□ -0.99
Rfx1P48377 Rps6-ps2-201ENSMUST00000079841 747 ntBASIC8.84□□□□□ -0.99
Rfx1P48377 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Rfx1P48377 Vmn1r204-201ENSMUST00000091728 909 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Rfx1P48377 Dab2-201ENSMUST00000078019 3793 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Rfx1P48377 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Rfx1P48377 AC171003.1-201ENSMUST00000221667 1665 ntBASIC8.84□□□□□ -0.99
Rfx1P48377 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Rfx1P48377 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC8.83□□□□□ -1
Rfx1P48377 Vmn2r-ps159-202ENSMUST00000096792 2574 ntBASIC8.83□□□□□ -1
Rfx1P48377 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Rfx1P48377 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Rfx1P48377 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC8.83□□□□□ -1
Rfx1P48377 Apobec3-209ENSMUST00000176325 2765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Rfx1P48377 Gm43845-201ENSMUST00000202462 1820 ntBASIC8.83□□□□□ -1
Rfx1P48377 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC8.83□□□□□ -1
Rfx1P48377 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC8.83□□□□□ -1
Rfx1P48377 Lipo4-201ENSMUST00000112511 1188 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Rfx1P48377 Zfx-202ENSMUST00000113925 879 ntTSL 1 (best) BASIC8.83□□□□□ -1
Rfx1P48377 Gm7599-201ENSMUST00000121453 796 ntBASIC8.83□□□□□ -1
Rfx1P48377 Gm12967-201ENSMUST00000122147 289 ntBASIC8.83□□□□□ -1
Rfx1P48377 Gm11188-201ENSMUST00000122382 388 ntBASIC8.83□□□□□ -1
Rfx1P48377 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC8.83□□□□□ -1
Rfx1P48377 Mgst1-207ENSMUST00000140932 742 ntTSL 3 BASIC8.83□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms