Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm13835-201ENSMUST00000118459 685 ntBASIC7.28□□□□□ -1.24
Cxcl12P40224 Gm8812-201ENSMUST00000118496 412 ntBASIC7.28□□□□□ -1.24
Cxcl12P40224 Gm11198-201ENSMUST00000119771 974 ntBASIC7.28□□□□□ -1.24
Cxcl12P40224 Gm7113-201ENSMUST00000120477 958 ntBASIC7.28□□□□□ -1.24
Cxcl12P40224 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC7.28□□□□□ -1.24
Cxcl12P40224 Gm15300-201ENSMUST00000122324 279 ntBASIC7.28□□□□□ -1.24
Cxcl12P40224 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC7.28□□□□□ -1.24
Cxcl12P40224 Gm16557-201ENSMUST00000159182 191 ntBASIC7.28□□□□□ -1.24
Cxcl12P40224 Gm7152-201ENSMUST00000163570 605 ntBASIC7.28□□□□□ -1.24
Cxcl12P40224 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC7.28□□□□□ -1.24
Cxcl12P40224 n-R5s109-201ENSMUST00000179195 119 ntBASIC7.28□□□□□ -1.24
Cxcl12P40224 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Cxcl12P40224 Ank3-208ENSMUST00000182029 3825 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Cxcl12P40224 Gm21542-201ENSMUST00000182307 993 ntBASIC7.28□□□□□ -1.24
Cxcl12P40224 Gm27507-201ENSMUST00000184199 93 ntBASIC7.28□□□□□ -1.24
Cxcl12P40224 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC7.28□□□□□ -1.24
Cxcl12P40224 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Cxcl12P40224 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC7.28□□□□□ -1.24
Cxcl12P40224 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC7.28□□□□□ -1.24
Cxcl12P40224 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC7.28□□□□□ -1.24
Cxcl12P40224 Gm5154-201ENSMUST00000203971 399 ntBASIC7.28□□□□□ -1.24
Cxcl12P40224 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC7.28□□□□□ -1.24
Cxcl12P40224 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC7.28□□□□□ -1.24
Cxcl12P40224 AC132260.1-201ENSMUST00000225499 734 ntBASIC7.28□□□□□ -1.24
Cxcl12P40224 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Cxcl12P40224 Gm2840-201ENSMUST00000048361 411 ntBASIC7.28□□□□□ -1.24
Cxcl12P40224 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Cxcl12P40224 Gm16020-201ENSMUST00000084281 210 ntBASIC7.28□□□□□ -1.24
Cxcl12P40224 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Cxcl12P40224 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Cxcl12P40224 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
Cxcl12P40224 Itpr2-201ENSMUST00000053273 8331 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Cxcl12P40224 Lgals8-207ENSMUST00000143693 2457 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Cxcl12P40224 Gm26813-201ENSMUST00000180778 3587 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Cxcl12P40224 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
Cxcl12P40224 Ttc41-203ENSMUST00000217747 1949 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Cxcl12P40224 Gm8107-201ENSMUST00000117477 2009 ntBASIC7.28□□□□□ -1.24
Cxcl12P40224 Ehbp1-207ENSMUST00000180360 4971 ntAPPRIS P3 TSL 5 BASIC7.28□□□□□ -1.24
Cxcl12P40224 Cfap58-201ENSMUST00000066308 3345 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Cxcl12P40224 Zp2-205ENSMUST00000208874 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Cxcl12P40224 Olfr1395-202ENSMUST00000203377 2883 ntAPPRIS P1 TSL 3 BASIC7.28□□□□□ -1.24
Cxcl12P40224 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC7.28□□□□□ -1.24
Cxcl12P40224 Slc3a1-201ENSMUST00000024944 2307 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Cxcl12P40224 Gm38315-201ENSMUST00000194286 2437 ntBASIC7.28□□□□□ -1.24
Cxcl12P40224 Ccr6-201ENSMUST00000097418 1755 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Cxcl12P40224 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC7.28□□□□□ -1.24
Cxcl12P40224 Pgbd1-205ENSMUST00000151743 2642 ntAPPRIS P4 TSL 1 (best) BASIC7.28□□□□□ -1.24
Cxcl12P40224 Gm10862-201ENSMUST00000193956 3350 ntBASIC7.28□□□□□ -1.24
Cxcl12P40224 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Cxcl12P40224 Impg2-202ENSMUST00000069936 6890 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Cxcl12P40224 Apobec1-203ENSMUST00000112587 2072 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Cxcl12P40224 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Cxcl12P40224 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
Cxcl12P40224 Slc5a6-205ENSMUST00000202520 3248 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
Cxcl12P40224 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Cxcl12P40224 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC7.27□□□□□ -1.25
Cxcl12P40224 Wdr76-201ENSMUST00000028676 2789 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Cxcl12P40224 Fbxw11-201ENSMUST00000076383 4019 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Cxcl12P40224 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Cxcl12P40224 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
Cxcl12P40224 AC155234.1-201ENSMUST00000225610 2823 ntBASIC7.27□□□□□ -1.25
Cxcl12P40224 Il31ra-206ENSMUST00000224510 2946 ntAPPRIS ALT2 BASIC7.27□□□□□ -1.25
Cxcl12P40224 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC7.27□□□□□ -1.25
Cxcl12P40224 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Cxcl12P40224 Zfp128-202ENSMUST00000144578 3834 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Cxcl12P40224 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC7.27□□□□□ -1.25
Cxcl12P40224 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC7.27□□□□□ -1.25
Cxcl12P40224 Gm24395-201ENSMUST00000158139 125 ntBASIC7.27□□□□□ -1.25
Cxcl12P40224 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC7.27□□□□□ -1.25
Cxcl12P40224 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC7.27□□□□□ -1.25
Cxcl12P40224 Gm17096-201ENSMUST00000172037 733 ntTSL 5 BASIC7.27□□□□□ -1.25
Cxcl12P40224 Gm6726-201ENSMUST00000172786 681 ntBASIC7.27□□□□□ -1.25
Cxcl12P40224 Gm23810-201ENSMUST00000175150 74 ntBASIC7.27□□□□□ -1.25
Cxcl12P40224 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Cxcl12P40224 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC7.27□□□□□ -1.25
Cxcl12P40224 Mir7674-201ENSMUST00000184964 63 ntBASIC7.27□□□□□ -1.25
Cxcl12P40224 1700012I11Rik-201ENSMUST00000187233 1039 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Cxcl12P40224 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC7.27□□□□□ -1.25
Cxcl12P40224 CT025685.1-201ENSMUST00000213716 150 ntBASIC7.27□□□□□ -1.25
Cxcl12P40224 Gm40552-201ENSMUST00000218233 1258 ntTSL 5 BASIC7.27□□□□□ -1.25
Cxcl12P40224 CT009515.3-201ENSMUST00000226509 671 ntBASIC7.27□□□□□ -1.25
Cxcl12P40224 AC164436.1-201ENSMUST00000227074 772 ntBASIC7.27□□□□□ -1.25
Cxcl12P40224 AC157572.4-201ENSMUST00000228203 549 ntBASIC7.27□□□□□ -1.25
Cxcl12P40224 AC166574.7-201ENSMUST00000228502 704 ntBASIC7.27□□□□□ -1.25
Cxcl12P40224 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Cxcl12P40224 Snora21-201ENSMUST00000082967 137 ntBASIC7.27□□□□□ -1.25
Cxcl12P40224 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Cxcl12P40224 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Cxcl12P40224 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
Cxcl12P40224 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Cxcl12P40224 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Cxcl12P40224 Thrb-201ENSMUST00000022303 4532 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Cxcl12P40224 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Cxcl12P40224 Dus4l-201ENSMUST00000020977 1773 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Cxcl12P40224 Gm42820-201ENSMUST00000200084 3063 ntBASIC7.27□□□□□ -1.25
Cxcl12P40224 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC7.27□□□□□ -1.25
Cxcl12P40224 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Cxcl12P40224 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
Cxcl12P40224 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Cxcl12P40224 Smarcal1-201ENSMUST00000047615 3059 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms