Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Traf1P39428 Gm42568-201ENSMUST00000195639 1841 ntBASIC8.23□□□□□ -1.09
Traf1P39428 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC8.23□□□□□ -1.09
Traf1P39428 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Traf1P39428 Abraxas1-203ENSMUST00000117364 1657 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Traf1P39428 Pcyt1b-202ENSMUST00000113933 4867 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Traf1P39428 Kbtbd8-201ENSMUST00000032107 4869 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Traf1P39428 Gm28856-201ENSMUST00000189150 2828 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Traf1P39428 9330199G10Rik-201ENSMUST00000221601 2072 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Traf1P39428 AC159195.2-201ENSMUST00000223670 3757 ntBASIC8.23□□□□□ -1.09
Traf1P39428 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Traf1P39428 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Traf1P39428 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Traf1P39428 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC8.23□□□□□ -1.09
Traf1P39428 Med12-201ENSMUST00000087948 6809 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Traf1P39428 Atp2b4-207ENSMUST00000165602 8101 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
Traf1P39428 Plch1-203ENSMUST00000084105 6245 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
Traf1P39428 Gm44101-201ENSMUST00000203951 2221 ntBASIC8.22□□□□□ -1.09
Traf1P39428 Gm12346-201ENSMUST00000121455 2255 ntBASIC8.22□□□□□ -1.09
Traf1P39428 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Traf1P39428 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Traf1P39428 Gm43211-201ENSMUST00000196901 1899 ntBASIC8.22□□□□□ -1.09
Traf1P39428 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC8.22□□□□□ -1.09
Traf1P39428 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Traf1P39428 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Traf1P39428 Gm13878-201ENSMUST00000117986 577 ntBASIC8.22□□□□□ -1.09
Traf1P39428 Gm6987-201ENSMUST00000119319 428 ntBASIC8.22□□□□□ -1.09
Traf1P39428 Gm12375-201ENSMUST00000119331 921 ntBASIC8.22□□□□□ -1.09
Traf1P39428 Gm15129-201ENSMUST00000119673 279 ntBASIC8.22□□□□□ -1.09
Traf1P39428 Gm12804-201ENSMUST00000121030 999 ntBASIC8.22□□□□□ -1.09
Traf1P39428 Gm14251-201ENSMUST00000122133 279 ntBASIC8.22□□□□□ -1.09
Traf1P39428 Gm14380-201ENSMUST00000122298 431 ntBASIC8.22□□□□□ -1.09
Traf1P39428 Gm12863-201ENSMUST00000155069 536 ntTSL 2 BASIC8.22□□□□□ -1.09
Traf1P39428 Gm4613-201ENSMUST00000165488 276 ntBASIC8.22□□□□□ -1.09
Traf1P39428 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC8.22□□□□□ -1.09
Traf1P39428 Gm24157-201ENSMUST00000175265 111 ntBASIC8.22□□□□□ -1.09
Traf1P39428 Gm22642-201ENSMUST00000175352 252 ntBASIC8.22□□□□□ -1.09
Traf1P39428 1700012I11Rik-201ENSMUST00000187233 1039 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Traf1P39428 Gm29099-201ENSMUST00000187370 760 ntTSL 5 BASIC8.22□□□□□ -1.09
Traf1P39428 Gm43555-201ENSMUST00000196588 310 ntBASIC8.22□□□□□ -1.09
Traf1P39428 Gm42782-201ENSMUST00000197286 522 ntBASIC8.22□□□□□ -1.09
Traf1P39428 1700094M23Rik-202ENSMUST00000198047 675 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Traf1P39428 Gm42963-201ENSMUST00000202943 1217 ntBASIC8.22□□□□□ -1.09
Traf1P39428 Gm18907-201ENSMUST00000209719 932 ntBASIC8.22□□□□□ -1.09
Traf1P39428 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC8.22□□□□□ -1.09
Traf1P39428 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC8.22□□□□□ -1.09
Traf1P39428 Gm31711-201ENSMUST00000220687 196 ntBASIC8.22□□□□□ -1.09
Traf1P39428 AC161275.1-201ENSMUST00000224668 208 ntBASIC8.22□□□□□ -1.09
Traf1P39428 Fam47e-201ENSMUST00000082382 750 ntTSL 5 BASIC8.22□□□□□ -1.09
Traf1P39428 Gm5446-201ENSMUST00000091762 784 ntBASIC8.22□□□□□ -1.09
Traf1P39428 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Traf1P39428 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Traf1P39428 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Traf1P39428 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Traf1P39428 Zeb2-213ENSMUST00000176732 1762 ntTSL 5 BASIC8.22□□□□□ -1.09
Traf1P39428 Zmat3-201ENSMUST00000029199 7797 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Traf1P39428 AC135119.1-202ENSMUST00000228435 2203 ntBASIC8.22□□□□□ -1.09
Traf1P39428 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Traf1P39428 Gm37043-201ENSMUST00000194609 3105 ntBASIC8.22□□□□□ -1.09
Traf1P39428 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Traf1P39428 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Traf1P39428 Adad1-201ENSMUST00000029274 1838 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Traf1P39428 Nol8-203ENSMUST00000221142 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Traf1P39428 Gm45061-201ENSMUST00000204395 2095 ntBASIC8.22□□□□□ -1.09
Traf1P39428 AC139350.2-201ENSMUST00000226508 2331 ntBASIC8.21□□□□□ -1.09
Traf1P39428 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC8.21□□□□□ -1.09
Traf1P39428 Mageb18-202ENSMUST00000113955 2163 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
Traf1P39428 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Traf1P39428 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Traf1P39428 Nr1h5-203ENSMUST00000196983 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
Traf1P39428 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Traf1P39428 Olfr615-203ENSMUST00000215673 3469 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
Traf1P39428 Pcsk2os1-201ENSMUST00000126735 4233 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Traf1P39428 Nr5a2-201ENSMUST00000027649 4733 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Traf1P39428 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
Traf1P39428 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC8.21□□□□□ -1.1
Traf1P39428 Gm26416-201ENSMUST00000104280 134 ntBASIC8.21□□□□□ -1.1
Traf1P39428 n-R5s172-201ENSMUST00000104508 114 ntBASIC8.21□□□□□ -1.1
Traf1P39428 n-R5s72-201ENSMUST00000104518 119 ntBASIC8.21□□□□□ -1.1
Traf1P39428 Gm7821-201ENSMUST00000117111 788 ntBASIC8.21□□□□□ -1.1
Traf1P39428 Gm15186-201ENSMUST00000119345 563 ntBASIC8.21□□□□□ -1.1
Traf1P39428 Gm12174-201ENSMUST00000119853 813 ntBASIC8.21□□□□□ -1.1
Traf1P39428 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC8.21□□□□□ -1.1
Traf1P39428 Gm11697-201ENSMUST00000149226 525 ntTSL 2 BASIC8.21□□□□□ -1.1
Traf1P39428 Gm25969-201ENSMUST00000157166 132 ntBASIC8.21□□□□□ -1.1
Traf1P39428 Gm42421-201ENSMUST00000172367 719 ntAPPRIS P1 TSL 3 BASIC8.21□□□□□ -1.1
Traf1P39428 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Traf1P39428 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Traf1P39428 Gm8357-201ENSMUST00000181115 1011 ntBASIC8.21□□□□□ -1.1
Traf1P39428 Gm8245-201ENSMUST00000182434 987 ntBASIC8.21□□□□□ -1.1
Traf1P39428 Gm37548-201ENSMUST00000194519 3814 ntBASIC8.21□□□□□ -1.1
Traf1P39428 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC8.21□□□□□ -1.1
Traf1P39428 Gm8058-201ENSMUST00000217247 587 ntBASIC8.21□□□□□ -1.1
Traf1P39428 AC124184.1-201ENSMUST00000218167 283 ntBASIC8.21□□□□□ -1.1
Traf1P39428 Zp4-ps-202ENSMUST00000222293 922 ntTSL 3 BASIC8.21□□□□□ -1.1
Traf1P39428 Gm46379-201ENSMUST00000222551 265 ntBASIC8.21□□□□□ -1.1
Traf1P39428 Gm5374-202ENSMUST00000222910 314 ntBASIC8.21□□□□□ -1.1
Traf1P39428 AC154515.3-201ENSMUST00000225081 1159 ntBASIC8.21□□□□□ -1.1
Traf1P39428 AC156574.1-201ENSMUST00000227084 452 ntBASIC8.21□□□□□ -1.1
Traf1P39428 AC121997.2-202ENSMUST00000227158 939 ntBASIC8.21□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 139.8 ms