Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 5830408C22Rik-203ENSMUST00000210596 326 ntTSL 3 BASIC9.19□□□□□ -0.94
Col18a1P39061 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Col18a1P39061 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC9.19□□□□□ -0.94
Col18a1P39061 Zmym2-202ENSMUST00000223669 1281 ntBASIC9.19□□□□□ -0.94
Col18a1P39061 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Col18a1P39061 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Col18a1P39061 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Col18a1P39061 1700026J12Rik-201ENSMUST00000098226 1127 ntTSL 5 BASIC9.19□□□□□ -0.94
Col18a1P39061 Il1rap-201ENSMUST00000023156 4520 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Col18a1P39061 Pcyt1a-203ENSMUST00000115137 4244 ntTSL 5 BASIC9.19□□□□□ -0.94
Col18a1P39061 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Col18a1P39061 Rimbp2-201ENSMUST00000111346 4264 ntAPPRIS P3 TSL 5 BASIC9.19□□□□□ -0.94
Col18a1P39061 Gm26656-201ENSMUST00000181825 2972 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Col18a1P39061 Tlr1-202ENSMUST00000197315 3025 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Col18a1P39061 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Col18a1P39061 Gm11853-201ENSMUST00000119687 1384 ntBASIC9.19□□□□□ -0.94
Col18a1P39061 Setbp1-201ENSMUST00000025430 9953 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Col18a1P39061 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC9.18□□□□□ -0.94
Col18a1P39061 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC9.18□□□□□ -0.94
Col18a1P39061 Gm4767-202ENSMUST00000188096 4725 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col18a1P39061 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC9.18□□□□□ -0.94
Col18a1P39061 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col18a1P39061 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Col18a1P39061 Bach2-207ENSMUST00000171600 8493 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col18a1P39061 4930562C15Rik-201ENSMUST00000100211 3829 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Col18a1P39061 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC9.18□□□□□ -0.94
Col18a1P39061 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC9.18□□□□□ -0.94
Col18a1P39061 Gm43316-201ENSMUST00000197252 1295 ntBASIC9.18□□□□□ -0.94
Col18a1P39061 Gm43846-201ENSMUST00000200502 932 ntBASIC9.18□□□□□ -0.94
Col18a1P39061 Gm44251-201ENSMUST00000204963 442 ntBASIC9.18□□□□□ -0.94
Col18a1P39061 Gm18805-201ENSMUST00000206872 655 ntBASIC9.18□□□□□ -0.94
Col18a1P39061 Gm18914-201ENSMUST00000214625 616 ntBASIC9.18□□□□□ -0.94
Col18a1P39061 Gm8058-201ENSMUST00000217247 587 ntBASIC9.18□□□□□ -0.94
Col18a1P39061 AC172027.1-201ENSMUST00000217659 337 ntBASIC9.18□□□□□ -0.94
Col18a1P39061 Gm46364-201ENSMUST00000218548 319 ntBASIC9.18□□□□□ -0.94
Col18a1P39061 Vmn1r41-202ENSMUST00000226337 888 ntBASIC9.18□□□□□ -0.94
Col18a1P39061 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC9.18□□□□□ -0.94
Col18a1P39061 AC156790.1-201ENSMUST00000226572 559 ntBASIC9.18□□□□□ -0.94
Col18a1P39061 Olfr734-201ENSMUST00000050928 1033 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Col18a1P39061 Olfr399-201ENSMUST00000059440 1003 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Col18a1P39061 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col18a1P39061 5330413P13Rik-203ENSMUST00000150466 2173 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Col18a1P39061 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col18a1P39061 AC159308.1-201ENSMUST00000216615 1351 ntBASIC9.18□□□□□ -0.94
Col18a1P39061 Grik2-205ENSMUST00000218598 3245 ntTSL 5 BASIC9.18□□□□□ -0.94
Col18a1P39061 Slc8a1-202ENSMUST00000163123 2877 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Col18a1P39061 Mccc1os-201ENSMUST00000124469 3353 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Col18a1P39061 Gm28370-201ENSMUST00000185303 3375 ntTSL 5 BASIC9.18□□□□□ -0.94
Col18a1P39061 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Col18a1P39061 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Col18a1P39061 Kcnj15-206ENSMUST00000113859 5046 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Col18a1P39061 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col18a1P39061 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Col18a1P39061 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col18a1P39061 Olfr622-204ENSMUST00000216570 2149 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Col18a1P39061 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col18a1P39061 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC9.18□□□□□ -0.94
Col18a1P39061 A630001O12Rik-201ENSMUST00000212914 2182 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Col18a1P39061 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Col18a1P39061 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Col18a1P39061 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Col18a1P39061 Gm13455-201ENSMUST00000118767 517 ntBASIC9.17□□□□□ -0.94
Col18a1P39061 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC9.17□□□□□ -0.94
Col18a1P39061 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC9.17□□□□□ -0.94
Col18a1P39061 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Col18a1P39061 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Col18a1P39061 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Col18a1P39061 Gm38131-201ENSMUST00000192449 430 ntBASIC9.17□□□□□ -0.94
Col18a1P39061 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Col18a1P39061 Gm37215-201ENSMUST00000194927 1259 ntBASIC9.17□□□□□ -0.94
Col18a1P39061 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Col18a1P39061 Gm42814-201ENSMUST00000199370 460 ntBASIC9.17□□□□□ -0.94
Col18a1P39061 Gm44607-201ENSMUST00000205611 1090 ntBASIC9.17□□□□□ -0.94
Col18a1P39061 Gm44683-201ENSMUST00000209088 484 ntBASIC9.17□□□□□ -0.94
Col18a1P39061 AC116589.4-201ENSMUST00000222390 216 ntBASIC9.17□□□□□ -0.94
Col18a1P39061 Hivep2-201ENSMUST00000015645 9763 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Col18a1P39061 Gm28441-201ENSMUST00000190927 1343 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Col18a1P39061 Eif4e2-202ENSMUST00000076362 3394 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Col18a1P39061 Caps2-201ENSMUST00000092176 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Col18a1P39061 AC136019.1-201ENSMUST00000226503 1412 ntBASIC9.17□□□□□ -0.94
Col18a1P39061 Fam129a-205ENSMUST00000148810 6531 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Col18a1P39061 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Col18a1P39061 Morc2b-201ENSMUST00000053896 3712 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Col18a1P39061 Chil4-201ENSMUST00000082219 1539 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Col18a1P39061 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Col18a1P39061 Unc13d-203ENSMUST00000106451 3973 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Col18a1P39061 Rdh16-201ENSMUST00000071646 3207 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Col18a1P39061 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Col18a1P39061 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
Col18a1P39061 Vtcn1-201ENSMUST00000054791 2622 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Col18a1P39061 Gm45767-201ENSMUST00000212778 4561 ntBASIC9.17□□□□□ -0.94
Col18a1P39061 Luzp1-203ENSMUST00000105849 7438 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Col18a1P39061 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Col18a1P39061 Gm26541-201ENSMUST00000181866 3973 ntTSL 5 BASIC9.17□□□□□ -0.94
Col18a1P39061 Phf6-201ENSMUST00000078944 4350 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Col18a1P39061 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Col18a1P39061 Olfr1426-206ENSMUST00000219996 2436 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Col18a1P39061 Aph1b-201ENSMUST00000034934 4910 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Col18a1P39061 Gm13428-201ENSMUST00000117540 365 ntBASIC9.17□□□□□ -0.94
Col18a1P39061 Gm13114-201ENSMUST00000117605 106 ntBASIC9.17□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 97.9 ms