Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 1700092K14Rik-201ENSMUST00000106604 395 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Usp4P35123 Gmfg-202ENSMUST00000108289 477 ntTSL 3 BASIC7.61□□□□□ -1.19
Usp4P35123 Borcs8-202ENSMUST00000110139 679 ntAPPRIS ALT2 TSL 3 BASIC7.61□□□□□ -1.19
Usp4P35123 Gm5752-201ENSMUST00000117771 594 ntBASIC7.61□□□□□ -1.19
Usp4P35123 Gm12710-201ENSMUST00000119011 216 ntBASIC7.61□□□□□ -1.19
Usp4P35123 Gm4918-201ENSMUST00000119420 1084 ntBASIC7.61□□□□□ -1.19
Usp4P35123 Gm13924-201ENSMUST00000119899 486 ntBASIC7.61□□□□□ -1.19
Usp4P35123 Gm12967-201ENSMUST00000122147 289 ntBASIC7.61□□□□□ -1.19
Usp4P35123 Gm25178-201ENSMUST00000122633 325 ntBASIC7.61□□□□□ -1.19
Usp4P35123 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Usp4P35123 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Usp4P35123 1700001G01Rik-204ENSMUST00000153022 928 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Usp4P35123 2610001J05Rik-202ENSMUST00000155856 1077 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Usp4P35123 Gm25971-201ENSMUST00000158953 286 ntBASIC7.61□□□□□ -1.19
Usp4P35123 AI480526-201ENSMUST00000159072 957 ntTSL 2 BASIC7.61□□□□□ -1.19
Usp4P35123 Slc29a1-208ENSMUST00000164769 1226 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Usp4P35123 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC7.61□□□□□ -1.19
Usp4P35123 Gm28894-201ENSMUST00000185214 615 ntBASIC7.61□□□□□ -1.19
Usp4P35123 1700012I11Rik-201ENSMUST00000187233 1039 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Usp4P35123 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Usp4P35123 Gm4785-201ENSMUST00000191025 751 ntBASIC7.61□□□□□ -1.19
Usp4P35123 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC7.61□□□□□ -1.19
Usp4P35123 Gm37295-201ENSMUST00000192186 109 ntBASIC7.61□□□□□ -1.19
Usp4P35123 Gm37369-201ENSMUST00000194179 615 ntBASIC7.61□□□□□ -1.19
Usp4P35123 Gm32884-201ENSMUST00000205528 732 ntTSL 5 BASIC7.61□□□□□ -1.19
Usp4P35123 Olfr48-202ENSMUST00000214428 3848 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Usp4P35123 Gm18226-201ENSMUST00000215261 521 ntBASIC7.61□□□□□ -1.19
Usp4P35123 Gm3213-201ENSMUST00000219296 441 ntBASIC7.61□□□□□ -1.19
Usp4P35123 Gm45925-202ENSMUST00000219904 1136 ntBASIC7.61□□□□□ -1.19
Usp4P35123 AC055772.1-201ENSMUST00000222646 395 ntTSL 3 BASIC7.61□□□□□ -1.19
Usp4P35123 AC172989.1-201ENSMUST00000226387 513 ntBASIC7.61□□□□□ -1.19
Usp4P35123 Cthrc1-204ENSMUST00000226433 596 ntBASIC7.61□□□□□ -1.19
Usp4P35123 AC122937.2-201ENSMUST00000228258 1051 ntBASIC7.61□□□□□ -1.19
Usp4P35123 Ly6g-201ENSMUST00000023246 336 ntTSL 5 BASIC7.61□□□□□ -1.19
Usp4P35123 Ifitm5-201ENSMUST00000026562 765 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Usp4P35123 Gm1604a-201ENSMUST00000097422 781 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Usp4P35123 Zfp846-202ENSMUST00000115557 12974 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Usp4P35123 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Usp4P35123 Adh7-201ENSMUST00000090171 3432 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Usp4P35123 Gm11934-201ENSMUST00000132553 1536 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Usp4P35123 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Usp4P35123 Gm42577-201ENSMUST00000201367 3211 ntBASIC7.61□□□□□ -1.19
Usp4P35123 Ston2-201ENSMUST00000052969 9896 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Usp4P35123 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
Usp4P35123 Gm28379-202ENSMUST00000187676 2896 ntBASIC7.61□□□□□ -1.19
Usp4P35123 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC7.61□□□□□ -1.19
Usp4P35123 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC7.6□□□□□ -1.19
Usp4P35123 CT010453.1-201ENSMUST00000226795 2201 ntBASIC7.6□□□□□ -1.19
Usp4P35123 1700012E03Rik-201ENSMUST00000186237 1377 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Usp4P35123 Mbd5-201ENSMUST00000047413 8543 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
Usp4P35123 Arhgap32-201ENSMUST00000168954 8703 ntTSL 5 BASIC7.6□□□□□ -1.19
Usp4P35123 Pcyt1b-202ENSMUST00000113933 4867 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Usp4P35123 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Usp4P35123 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Usp4P35123 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Usp4P35123 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC7.6□□□□□ -1.19
Usp4P35123 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC7.6□□□□□ -1.19
Usp4P35123 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC7.6□□□□□ -1.19
Usp4P35123 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Usp4P35123 Gm14864-201ENSMUST00000116164 1087 ntBASIC7.6□□□□□ -1.19
Usp4P35123 Gm13702-201ENSMUST00000118542 825 ntBASIC7.6□□□□□ -1.19
Usp4P35123 Gm14739-201ENSMUST00000120424 802 ntBASIC7.6□□□□□ -1.19
Usp4P35123 Gm11945-201ENSMUST00000120551 476 ntBASIC7.6□□□□□ -1.19
Usp4P35123 Olfr1069-ps1-201ENSMUST00000120755 965 ntBASIC7.6□□□□□ -1.19
Usp4P35123 Gm11383-201ENSMUST00000121346 807 ntBASIC7.6□□□□□ -1.19
Usp4P35123 4930415H17Rik-201ENSMUST00000122396 123 ntBASIC7.6□□□□□ -1.19
Usp4P35123 Gm12410-201ENSMUST00000124989 405 ntTSL 3 BASIC7.6□□□□□ -1.19
Usp4P35123 Gm11309-201ENSMUST00000127108 613 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Usp4P35123 Mgst1-207ENSMUST00000140932 742 ntTSL 3 BASIC7.6□□□□□ -1.19
Usp4P35123 Tvp23bos-201ENSMUST00000148598 1011 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Usp4P35123 Gm16015-201ENSMUST00000154897 390 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Usp4P35123 Mir1968-201ENSMUST00000157429 68 ntBASIC7.6□□□□□ -1.19
Usp4P35123 Clec2i-204ENSMUST00000160867 933 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Usp4P35123 Clec2i-205ENSMUST00000162666 1091 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Usp4P35123 Gm5861-201ENSMUST00000168407 1016 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
Usp4P35123 Gm7289-201ENSMUST00000168993 734 ntBASIC7.6□□□□□ -1.19
Usp4P35123 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Usp4P35123 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
Usp4P35123 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
Usp4P35123 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC7.6□□□□□ -1.19
Usp4P35123 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC7.6□□□□□ -1.19
Usp4P35123 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC7.6□□□□□ -1.19
Usp4P35123 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
Usp4P35123 Gm26269-201ENSMUST00000180144 126 ntBASIC7.6□□□□□ -1.19
Usp4P35123 Gm27018-201ENSMUST00000181136 225 ntBASIC7.6□□□□□ -1.19
Usp4P35123 Gm9556-201ENSMUST00000182938 940 ntBASIC7.6□□□□□ -1.19
Usp4P35123 Gm15013-202ENSMUST00000183728 801 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Usp4P35123 Gm27177-204ENSMUST00000184491 602 ntTSL 3 BASIC7.6□□□□□ -1.19
Usp4P35123 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC7.6□□□□□ -1.19
Usp4P35123 Gm29129-201ENSMUST00000191121 659 ntTSL 3 BASIC7.6□□□□□ -1.19
Usp4P35123 Gm38283-201ENSMUST00000193041 695 ntBASIC7.6□□□□□ -1.19
Usp4P35123 Gm6119-201ENSMUST00000193443 1206 ntBASIC7.6□□□□□ -1.19
Usp4P35123 Gm17965-201ENSMUST00000193904 517 ntBASIC7.6□□□□□ -1.19
Usp4P35123 Gm43774-201ENSMUST00000196327 878 ntBASIC7.6□□□□□ -1.19
Usp4P35123 Gm38840-201ENSMUST00000204716 843 ntBASIC7.6□□□□□ -1.19
Usp4P35123 Gm34474-201ENSMUST00000209645 356 ntTSL 5 BASIC7.6□□□□□ -1.19
Usp4P35123 Ctxn3-203ENSMUST00000209786 1283 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Usp4P35123 Gm35521-201ENSMUST00000211285 440 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Usp4P35123 Gm32515-201ENSMUST00000219396 350 ntTSL 2 BASIC7.6□□□□□ -1.19
Usp4P35123 4930520K02Rik-201ENSMUST00000219522 388 ntTSL 3 BASIC7.6□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 95.8 ms