Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Olfr342-202ENSMUST00000216275 3818 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
P20040 Gm37914-201ENSMUST00000195317 2679 ntBASIC6.2□□□□□ -1.42
P20040 4931403G20Rik-201ENSMUST00000180861 1699 ntTSL 5 BASIC6.2□□□□□ -1.42
P20040 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
P20040 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
P20040 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
P20040 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
P20040 AC138765.2-202ENSMUST00000228418 3435 ntBASIC6.19□□□□□ -1.42
P20040 Gm38262-201ENSMUST00000194760 1382 ntBASIC6.19□□□□□ -1.42
P20040 Pank1-202ENSMUST00000112460 2759 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
P20040 Olfr432-203ENSMUST00000213381 4533 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
P20040 Olfr101-202ENSMUST00000214376 2989 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
P20040 Dpcr1-201ENSMUST00000095467 2611 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
P20040 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
P20040 AC161595.1-201ENSMUST00000216389 1993 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
P20040 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
P20040 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
P20040 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
P20040 Gm12789-201ENSMUST00000106914 883 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
P20040 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
P20040 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC6.19□□□□□ -1.42
P20040 Smt3h1-ps-201ENSMUST00000117126 280 ntBASIC6.19□□□□□ -1.42
P20040 Gm14745-201ENSMUST00000118480 1096 ntBASIC6.19□□□□□ -1.42
P20040 Gm11987-201ENSMUST00000118524 381 ntBASIC6.19□□□□□ -1.42
P20040 Gm13545-201ENSMUST00000119044 482 ntBASIC6.19□□□□□ -1.42
P20040 Gm4911-201ENSMUST00000119388 945 ntBASIC6.19□□□□□ -1.42
P20040 Gm13282-201ENSMUST00000121577 545 ntBASIC6.19□□□□□ -1.42
P20040 Gm15056-201ENSMUST00000122025 549 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
P20040 Gm22025-201ENSMUST00000122734 302 ntBASIC6.19□□□□□ -1.42
P20040 4931428L18Rik-201ENSMUST00000127775 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
P20040 Gm12590-201ENSMUST00000134226 404 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
P20040 1700011I03Rik-204ENSMUST00000135806 831 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
P20040 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC6.19□□□□□ -1.42
P20040 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC6.19□□□□□ -1.42
P20040 Gm25180-201ENSMUST00000157746 115 ntBASIC6.19□□□□□ -1.42
P20040 Gm6428-201ENSMUST00000161062 345 ntBASIC6.19□□□□□ -1.42
P20040 Polr3g-204ENSMUST00000161920 733 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
P20040 Slc25a5-ps-201ENSMUST00000162199 826 ntBASIC6.19□□□□□ -1.42
P20040 Olfr443-ps1-201ENSMUST00000163240 915 ntBASIC6.19□□□□□ -1.42
P20040 Gm7481-201ENSMUST00000182020 995 ntBASIC6.19□□□□□ -1.42
P20040 Pea15b-201ENSMUST00000182806 387 ntBASIC6.19□□□□□ -1.42
P20040 1700012I11Rik-201ENSMUST00000187233 1039 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
P20040 C430002N11Rik-202ENSMUST00000189067 1029 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
P20040 Gm37425-201ENSMUST00000193184 432 ntTSL 5 BASIC6.19□□□□□ -1.42
P20040 Gm33370-201ENSMUST00000195935 489 ntTSL 2 BASIC6.19□□□□□ -1.42
P20040 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC6.19□□□□□ -1.42
P20040 Olfr440-ps1-201ENSMUST00000204044 917 ntBASIC6.19□□□□□ -1.42
P20040 Gm8921-201ENSMUST00000204306 649 ntBASIC6.19□□□□□ -1.42
P20040 Gm35998-201ENSMUST00000212862 838 ntTSL 5 BASIC6.19□□□□□ -1.42
P20040 AC122428.4-201ENSMUST00000213494 589 ntTSL 3 BASIC6.19□□□□□ -1.42
P20040 Gm6581-201ENSMUST00000214545 260 ntBASIC6.19□□□□□ -1.42
P20040 AC134606.1-201ENSMUST00000216324 721 ntTSL 3 BASIC6.19□□□□□ -1.42
P20040 AC164550.1-201ENSMUST00000217821 1066 ntBASIC6.19□□□□□ -1.42
P20040 AC156576.3-201ENSMUST00000221940 452 ntTSL 5 BASIC6.19□□□□□ -1.42
P20040 AC165260.3-201ENSMUST00000225101 665 ntBASIC6.19□□□□□ -1.42
P20040 Cwc15-201ENSMUST00000004200 1111 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
P20040 Ly6c1-201ENSMUST00000065408 844 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
P20040 Olfr384-201ENSMUST00000072993 939 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
P20040 Olfr961-201ENSMUST00000076548 949 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
P20040 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
P20040 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
P20040 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC6.19□□□□□ -1.42
P20040 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
P20040 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
P20040 Gm26945-201ENSMUST00000183191 2011 ntBASIC6.19□□□□□ -1.42
P20040 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
P20040 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
P20040 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
P20040 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
P20040 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC6.19□□□□□ -1.42
P20040 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
P20040 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
P20040 Gm6558-201ENSMUST00000191934 1973 ntBASIC6.18□□□□□ -1.42
P20040 AC154806.2-201ENSMUST00000227212 2385 ntBASIC6.18□□□□□ -1.42
P20040 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
P20040 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
P20040 Nfib-202ENSMUST00000064770 8429 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
P20040 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
P20040 Olfr740-202ENSMUST00000214792 4103 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
P20040 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
P20040 Gm26016-201ENSMUST00000104403 129 ntBASIC6.18□□□□□ -1.42
P20040 Gm13871-201ENSMUST00000107318 936 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
P20040 Gm11757-201ENSMUST00000107320 936 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
P20040 Gm11758-201ENSMUST00000107326 936 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
P20040 Rhox4g-201ENSMUST00000115166 979 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
P20040 Gm14401-204ENSMUST00000134614 973 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
P20040 Gm13362-201ENSMUST00000137186 839 ntTSL 3 BASIC6.18□□□□□ -1.42
P20040 AC122263.2-201ENSMUST00000145909 586 ntTSL 3 BASIC6.18□□□□□ -1.42
P20040 Gm22000-201ENSMUST00000153087 730 ntTSL 5 BASIC6.18□□□□□ -1.42
P20040 Gm24422-201ENSMUST00000157800 119 ntBASIC6.18□□□□□ -1.42
P20040 Gm7651-201ENSMUST00000173398 901 ntBASIC6.18□□□□□ -1.42
P20040 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
P20040 Gm26179-201ENSMUST00000177723 132 ntBASIC6.18□□□□□ -1.42
P20040 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
P20040 B230104I21Rik-201ENSMUST00000181143 876 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
P20040 Gm27218-201ENSMUST00000183745 392 ntBASIC6.18□□□□□ -1.42
P20040 Gm5147-201ENSMUST00000185999 794 ntBASIC6.18□□□□□ -1.42
P20040 Gm29357-201ENSMUST00000186877 698 ntBASIC6.18□□□□□ -1.42
P20040 Gm29016-201ENSMUST00000187523 1013 ntTSL 3 BASIC6.18□□□□□ -1.42
P20040 Gm6472-202ENSMUST00000187973 582 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms