Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Tdrkh-204ENSMUST00000196606 2586 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Cdx1P18111 Gm37033-201ENSMUST00000193199 7350 ntBASIC5.75□□□□□ -1.49
Cdx1P18111 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Cdx1P18111 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cdx1P18111 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cdx1P18111 Gm44116-201ENSMUST00000204269 1525 ntBASIC5.75□□□□□ -1.49
Cdx1P18111 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC5.75□□□□□ -1.49
Cdx1P18111 Gm45290-201ENSMUST00000211177 3890 ntBASIC5.75□□□□□ -1.49
Cdx1P18111 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cdx1P18111 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC5.75□□□□□ -1.49
Cdx1P18111 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC5.75□□□□□ -1.49
Cdx1P18111 Gm46430-207ENSMUST00000222254 1703 ntTSL 5 BASIC5.75□□□□□ -1.49
Cdx1P18111 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cdx1P18111 Gm25083-201ENSMUST00000102319 92 ntBASIC5.75□□□□□ -1.49
Cdx1P18111 Igkv12-46-201ENSMUST00000103365 377 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Cdx1P18111 Gm9493-201ENSMUST00000104916 579 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Cdx1P18111 Gm7129-201ENSMUST00000117402 997 ntBASIC5.75□□□□□ -1.49
Cdx1P18111 Gm12098-201ENSMUST00000118277 508 ntBASIC5.75□□□□□ -1.49
Cdx1P18111 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC5.75□□□□□ -1.49
Cdx1P18111 Gm13163-201ENSMUST00000119875 336 ntBASIC5.75□□□□□ -1.49
Cdx1P18111 H2-Ea-ps-201ENSMUST00000134042 686 ntBASIC5.75□□□□□ -1.49
Cdx1P18111 Gm15792-201ENSMUST00000137099 769 ntTSL 3 BASIC5.75□□□□□ -1.49
Cdx1P18111 Gm14024-201ENSMUST00000141964 560 ntTSL 2 BASIC5.75□□□□□ -1.49
Cdx1P18111 Gm14319-201ENSMUST00000142937 703 ntTSL 2 BASIC5.75□□□□□ -1.49
Cdx1P18111 Gm11632-201ENSMUST00000145489 674 ntTSL 3 BASIC5.75□□□□□ -1.49
Cdx1P18111 Gm22000-201ENSMUST00000153087 730 ntTSL 5 BASIC5.75□□□□□ -1.49
Cdx1P18111 Gm23392-201ENSMUST00000157580 113 ntBASIC5.75□□□□□ -1.49
Cdx1P18111 Scarna17-201ENSMUST00000158064 79 ntBASIC5.75□□□□□ -1.49
Cdx1P18111 Gm22948-201ENSMUST00000158561 243 ntBASIC5.75□□□□□ -1.49
Cdx1P18111 Gm8624-202ENSMUST00000165677 669 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Cdx1P18111 Gm4781-201ENSMUST00000167995 781 ntBASIC5.75□□□□□ -1.49
Cdx1P18111 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC5.75□□□□□ -1.49
Cdx1P18111 Gm6176-201ENSMUST00000178209 906 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Cdx1P18111 Gm4567-201ENSMUST00000178591 906 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Cdx1P18111 Gm10668-201ENSMUST00000179491 906 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Cdx1P18111 Gm27595-201ENSMUST00000184579 112 ntBASIC5.75□□□□□ -1.49
Cdx1P18111 4930533D04Rik-201ENSMUST00000185478 788 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Cdx1P18111 Gm6799-201ENSMUST00000186919 573 ntBASIC5.75□□□□□ -1.49
Cdx1P18111 Gm4545-201ENSMUST00000190797 603 ntBASIC5.75□□□□□ -1.49
Cdx1P18111 Gm37349-201ENSMUST00000194205 624 ntBASIC5.75□□□□□ -1.49
Cdx1P18111 Gm37729-201ENSMUST00000194761 1172 ntBASIC5.75□□□□□ -1.49
Cdx1P18111 Gm42808-201ENSMUST00000198212 285 ntTSL 5 BASIC5.75□□□□□ -1.49
Cdx1P18111 Gm44982-201ENSMUST00000208795 471 ntBASIC5.75□□□□□ -1.49
Cdx1P18111 4930483O08Rik-201ENSMUST00000209850 1030 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Cdx1P18111 Gm7789-201ENSMUST00000210473 701 ntTSL 3 BASIC5.75□□□□□ -1.49
Cdx1P18111 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC5.75□□□□□ -1.49
Cdx1P18111 1700047G07Rik-202ENSMUST00000212351 842 ntTSL 5 BASIC5.75□□□□□ -1.49
Cdx1P18111 Gm36435-201ENSMUST00000213341 1178 ntTSL 5 BASIC5.75□□□□□ -1.49
Cdx1P18111 Gm18972-201ENSMUST00000218873 630 ntBASIC5.75□□□□□ -1.49
Cdx1P18111 Gm5080-201ENSMUST00000220341 743 ntBASIC5.75□□□□□ -1.49
Cdx1P18111 AC132590.1-201ENSMUST00000224374 1164 ntBASIC5.75□□□□□ -1.49
Cdx1P18111 AC126805.1-201ENSMUST00000225142 262 ntBASIC5.75□□□□□ -1.49
Cdx1P18111 Zfp874a-208ENSMUST00000225479 1092 ntBASIC5.75□□□□□ -1.49
Cdx1P18111 AC154283.1-201ENSMUST00000228417 389 ntBASIC5.75□□□□□ -1.49
Cdx1P18111 Defb3-201ENSMUST00000033852 275 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cdx1P18111 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cdx1P18111 Olfr1032-201ENSMUST00000062166 933 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Cdx1P18111 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Cdx1P18111 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Cdx1P18111 Mir146b-201ENSMUST00000093619 109 ntBASIC5.75□□□□□ -1.49
Cdx1P18111 Klrk1-202ENSMUST00000095412 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cdx1P18111 Anapc15-ps-201ENSMUST00000099328 426 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Cdx1P18111 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Cdx1P18111 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
Cdx1P18111 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC5.75□□□□□ -1.49
Cdx1P18111 Gm6729-201ENSMUST00000165173 1452 ntBASIC5.75□□□□□ -1.49
Cdx1P18111 Rnase4-202ENSMUST00000169895 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cdx1P18111 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Cdx1P18111 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC5.75□□□□□ -1.49
Cdx1P18111 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
Cdx1P18111 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cdx1P18111 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cdx1P18111 Olfr596-202ENSMUST00000214577 3392 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Cdx1P18111 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cdx1P18111 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Cdx1P18111 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
Cdx1P18111 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Cdx1P18111 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Cdx1P18111 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC5.74□□□□□ -1.49
Cdx1P18111 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx1P18111 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
Cdx1P18111 Gm43557-201ENSMUST00000197100 2370 ntBASIC5.74□□□□□ -1.49
Cdx1P18111 Gm39526-201ENSMUST00000208925 1413 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx1P18111 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx1P18111 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx1P18111 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Cdx1P18111 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx1P18111 Gm43360-201ENSMUST00000197656 2887 ntBASIC5.74□□□□□ -1.49
Cdx1P18111 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx1P18111 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx1P18111 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx1P18111 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx1P18111 Olfr212-203ENSMUST00000220134 2349 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Cdx1P18111 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Cdx1P18111 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Cdx1P18111 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC5.74□□□□□ -1.49
Cdx1P18111 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx1P18111 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx1P18111 Nppb-201ENSMUST00000103231 781 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Cdx1P18111 Gm23527-201ENSMUST00000104570 130 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms