Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Col1a1P11087 Slco6b1-202ENSMUST00000178359 1778 ntBASIC8.18□□□□□ -1.1
Col1a1P11087 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC8.18□□□□□ -1.1
Col1a1P11087 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC8.18□□□□□ -1.1
Col1a1P11087 Gm26410-201ENSMUST00000157670 261 ntBASIC8.18□□□□□ -1.1
Col1a1P11087 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Col1a1P11087 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Col1a1P11087 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC8.18□□□□□ -1.1
Col1a1P11087 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Col1a1P11087 Gm26557-201ENSMUST00000180756 493 ntBASIC8.18□□□□□ -1.1
Col1a1P11087 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC8.18□□□□□ -1.1
Col1a1P11087 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC8.18□□□□□ -1.1
Col1a1P11087 AC123656.1-201ENSMUST00000227121 581 ntBASIC8.18□□□□□ -1.1
Col1a1P11087 CT009556.1-201ENSMUST00000227282 449 ntBASIC8.18□□□□□ -1.1
Col1a1P11087 AC137902.1-201ENSMUST00000228184 102 ntBASIC8.18□□□□□ -1.1
Col1a1P11087 Olfr166-201ENSMUST00000074739 1040 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Col1a1P11087 n-R5s97-201ENSMUST00000082585 113 ntBASIC8.18□□□□□ -1.1
Col1a1P11087 Arhgef9-205ENSMUST00000113883 5399 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
Col1a1P11087 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC8.18□□□□□ -1.1
Col1a1P11087 Cdip1-201ENSMUST00000004173 3953 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Col1a1P11087 Csmd2-205ENSMUST00000184063 13555 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Col1a1P11087 Smarcal1-207ENSMUST00000152225 2994 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Col1a1P11087 Calcr-205ENSMUST00000171613 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Col1a1P11087 Gm43254-201ENSMUST00000199187 2491 ntBASIC8.18□□□□□ -1.1
Col1a1P11087 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Col1a1P11087 R3hdm2-203ENSMUST00000105249 3654 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
Col1a1P11087 Zscan18-203ENSMUST00000210650 3668 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Col1a1P11087 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Col1a1P11087 Pcnx4-201ENSMUST00000044352 4300 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col1a1P11087 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC8.17□□□□□ -1.1
Col1a1P11087 Svil-215ENSMUST00000210707 7633 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Col1a1P11087 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col1a1P11087 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col1a1P11087 Ergic2-208ENSMUST00000136008 4174 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col1a1P11087 Zfp939-202ENSMUST00000186855 2480 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col1a1P11087 Amy1-202ENSMUST00000106540 1771 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col1a1P11087 Ankrd49-206ENSMUST00000216372 2679 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col1a1P11087 4921521D15Rik-201ENSMUST00000197578 1927 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col1a1P11087 Retreg1-203ENSMUST00000226438 2783 ntBASIC8.17□□□□□ -1.1
Col1a1P11087 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col1a1P11087 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC8.17□□□□□ -1.1
Col1a1P11087 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC8.17□□□□□ -1.1
Col1a1P11087 Gm14733-201ENSMUST00000117680 133 ntBASIC8.17□□□□□ -1.1
Col1a1P11087 Gm5319-201ENSMUST00000118965 873 ntBASIC8.17□□□□□ -1.1
Col1a1P11087 Gm14580-201ENSMUST00000119122 718 ntBASIC8.17□□□□□ -1.1
Col1a1P11087 Gm14202-201ENSMUST00000120121 311 ntBASIC8.17□□□□□ -1.1
Col1a1P11087 Gm12307-201ENSMUST00000120581 590 ntBASIC8.17□□□□□ -1.1
Col1a1P11087 Gm13462-201ENSMUST00000121472 961 ntBASIC8.17□□□□□ -1.1
Col1a1P11087 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC8.17□□□□□ -1.1
Col1a1P11087 Gm6004-201ENSMUST00000173237 1116 ntBASIC8.17□□□□□ -1.1
Col1a1P11087 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC8.17□□□□□ -1.1
Col1a1P11087 Gm25675-201ENSMUST00000174979 118 ntBASIC8.17□□□□□ -1.1
Col1a1P11087 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Col1a1P11087 Gm35323-201ENSMUST00000191836 499 ntBASIC8.17□□□□□ -1.1
Col1a1P11087 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC8.17□□□□□ -1.1
Col1a1P11087 Gm45899-201ENSMUST00000212196 1276 ntBASIC8.17□□□□□ -1.1
Col1a1P11087 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC8.17□□□□□ -1.1
Col1a1P11087 Gm25587-201ENSMUST00000082498 166 ntBASIC8.17□□□□□ -1.1
Col1a1P11087 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Col1a1P11087 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col1a1P11087 Timd2-202ENSMUST00000109225 2236 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col1a1P11087 Ddx6-201ENSMUST00000170489 6065 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Col1a1P11087 Glmp-209ENSMUST00000177005 4219 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col1a1P11087 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC8.17□□□□□ -1.1
Col1a1P11087 Drp2-203ENSMUST00000113226 3499 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Col1a1P11087 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Col1a1P11087 Dusp18-201ENSMUST00000055931 4632 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col1a1P11087 Kif14-201ENSMUST00000047817 8770 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Col1a1P11087 Myo15-201ENSMUST00000071880 11769 ntAPPRIS P4 TSL 5 BASIC8.16□□□□□ -1.1
Col1a1P11087 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Col1a1P11087 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col1a1P11087 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col1a1P11087 Myo3b-203ENSMUST00000112243 6213 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Col1a1P11087 Mbnl3-202ENSMUST00000114875 4649 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Col1a1P11087 Osbpl9-201ENSMUST00000030288 2871 ntAPPRIS ALT1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col1a1P11087 Gm43123-201ENSMUST00000201893 3471 ntBASIC8.16□□□□□ -1.1
Col1a1P11087 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Col1a1P11087 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col1a1P11087 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Col1a1P11087 Gm13313-201ENSMUST00000118938 1084 ntBASIC8.16□□□□□ -1.1
Col1a1P11087 Gm13578-201ENSMUST00000120849 590 ntBASIC8.16□□□□□ -1.1
Col1a1P11087 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Col1a1P11087 Gm23896-201ENSMUST00000158109 130 ntBASIC8.16□□□□□ -1.1
Col1a1P11087 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC8.16□□□□□ -1.1
Col1a1P11087 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Col1a1P11087 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Col1a1P11087 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col1a1P11087 Gm20620-201ENSMUST00000177528 168 ntBASIC8.16□□□□□ -1.1
Col1a1P11087 Gm27018-201ENSMUST00000181136 225 ntBASIC8.16□□□□□ -1.1
Col1a1P11087 Gm9167-201ENSMUST00000182469 962 ntBASIC8.16□□□□□ -1.1
Col1a1P11087 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC8.16□□□□□ -1.1
Col1a1P11087 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC8.16□□□□□ -1.1
Col1a1P11087 Gm28620-201ENSMUST00000190463 439 ntBASIC8.16□□□□□ -1.1
Col1a1P11087 Gm18009-201ENSMUST00000203239 1016 ntBASIC8.16□□□□□ -1.1
Col1a1P11087 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC8.16□□□□□ -1.1
Col1a1P11087 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC8.16□□□□□ -1.1
Col1a1P11087 Gm4803-201ENSMUST00000218729 1279 ntBASIC8.16□□□□□ -1.1
Col1a1P11087 Vmn1r41-202ENSMUST00000226337 888 ntBASIC8.16□□□□□ -1.1
Col1a1P11087 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC8.16□□□□□ -1.1
Col1a1P11087 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms