Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC9.02□□□□□ -0.97
Hoxc9P09633 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Hoxc9P09633 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Hoxc9P09633 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Hoxc9P09633 Zhx3-202ENSMUST00000103112 9109 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Hoxc9P09633 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Hoxc9P09633 Wdfy3-201ENSMUST00000053177 14274 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Hoxc9P09633 Alkbh8-206ENSMUST00000212294 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Hoxc9P09633 Cts7-201ENSMUST00000021892 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Hoxc9P09633 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC9.02□□□□□ -0.97
Hoxc9P09633 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Hoxc9P09633 Nav1-202ENSMUST00000067414 13117 ntAPPRIS P2 TSL 5 BASIC9.02□□□□□ -0.97
Hoxc9P09633 Slc7a2-204ENSMUST00000118432 3681 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Hoxc9P09633 Gfpt1-204ENSMUST00000113658 6238 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Hoxc9P09633 Gmeb1-203ENSMUST00000105965 4632 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Hoxc9P09633 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC9.02□□□□□ -0.97
Hoxc9P09633 Gm12242-201ENSMUST00000118824 738 ntBASIC9.02□□□□□ -0.97
Hoxc9P09633 Gm7658-201ENSMUST00000119064 1124 ntBASIC9.02□□□□□ -0.97
Hoxc9P09633 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Hoxc9P09633 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC9.02□□□□□ -0.97
Hoxc9P09633 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC9.02□□□□□ -0.97
Hoxc9P09633 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Hoxc9P09633 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC9.02□□□□□ -0.97
Hoxc9P09633 Gm4904-201ENSMUST00000178243 1195 ntBASIC9.02□□□□□ -0.97
Hoxc9P09633 Gm26570-201ENSMUST00000180672 342 ntBASIC9.02□□□□□ -0.97
Hoxc9P09633 Gm28023-201ENSMUST00000184556 60 ntBASIC9.02□□□□□ -0.97
Hoxc9P09633 Gm27825-201ENSMUST00000184586 60 ntBASIC9.02□□□□□ -0.97
Hoxc9P09633 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Hoxc9P09633 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC9.02□□□□□ -0.97
Hoxc9P09633 Gm2229-201ENSMUST00000193328 710 ntBASIC9.02□□□□□ -0.97
Hoxc9P09633 Gm42443-201ENSMUST00000198084 1155 ntBASIC9.02□□□□□ -0.97
Hoxc9P09633 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC9.02□□□□□ -0.97
Hoxc9P09633 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC9.02□□□□□ -0.97
Hoxc9P09633 Gm8637-201ENSMUST00000212919 1085 ntBASIC9.02□□□□□ -0.97
Hoxc9P09633 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Hoxc9P09633 Gm4556-201ENSMUST00000217808 355 ntBASIC9.02□□□□□ -0.97
Hoxc9P09633 Olfr809-203ENSMUST00000218237 1100 ntBASIC9.02□□□□□ -0.97
Hoxc9P09633 AC132260.1-201ENSMUST00000225499 734 ntBASIC9.02□□□□□ -0.97
Hoxc9P09633 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Hoxc9P09633 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Hoxc9P09633 Mir196a-1-201ENSMUST00000083612 102 ntBASIC9.02□□□□□ -0.97
Hoxc9P09633 Exoc2-202ENSMUST00000102946 4375 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Hoxc9P09633 AC153143.2-201ENSMUST00000220999 1804 ntBASIC9.02□□□□□ -0.97
Hoxc9P09633 Dach2-203ENSMUST00000113379 2512 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Hoxc9P09633 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC9.02□□□□□ -0.97
Hoxc9P09633 Zfp661-203ENSMUST00000110368 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Hoxc9P09633 Gm21671-201ENSMUST00000162387 2421 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Hoxc9P09633 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Hoxc9P09633 Arfgef1-203ENSMUST00000131556 3424 ntTSL 5 BASIC9.02□□□□□ -0.97
Hoxc9P09633 Acad11-201ENSMUST00000047799 3444 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Hoxc9P09633 Ppargc1a-205ENSMUST00000196968 2754 ntTSL 5 BASIC9.01□□□□□ -0.97
Hoxc9P09633 Tssc1-206ENSMUST00000221877 4091 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Hoxc9P09633 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Hoxc9P09633 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Hoxc9P09633 Atp10d-201ENSMUST00000094710 2365 ntTSL 5 BASIC9.01□□□□□ -0.97
Hoxc9P09633 Slc17a6-201ENSMUST00000032710 4137 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Hoxc9P09633 Olfr97-206ENSMUST00000216225 1847 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Hoxc9P09633 Ergic2-208ENSMUST00000136008 4174 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Hoxc9P09633 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC9.01□□□□□ -0.97
Hoxc9P09633 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC9.01□□□□□ -0.97
Hoxc9P09633 Gm24473-201ENSMUST00000104483 131 ntBASIC9.01□□□□□ -0.97
Hoxc9P09633 Gm12135-201ENSMUST00000119170 466 ntBASIC9.01□□□□□ -0.97
Hoxc9P09633 Gm14375-201ENSMUST00000119490 855 ntBASIC9.01□□□□□ -0.97
Hoxc9P09633 Gm23430-201ENSMUST00000122490 314 ntBASIC9.01□□□□□ -0.97
Hoxc9P09633 Gm24383-201ENSMUST00000122691 333 ntBASIC9.01□□□□□ -0.97
Hoxc9P09633 Gm16248-201ENSMUST00000124238 243 ntBASIC9.01□□□□□ -0.97
Hoxc9P09633 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC9.01□□□□□ -0.97
Hoxc9P09633 Gm5970-201ENSMUST00000131638 1216 ntBASIC9.01□□□□□ -0.97
Hoxc9P09633 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Hoxc9P09633 Gm23903-201ENSMUST00000157566 131 ntBASIC9.01□□□□□ -0.97
Hoxc9P09633 Gm20432-201ENSMUST00000173716 250 ntBASIC9.01□□□□□ -0.97
Hoxc9P09633 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Hoxc9P09633 n-R5s109-201ENSMUST00000179195 119 ntBASIC9.01□□□□□ -0.97
Hoxc9P09633 Gm10410-201ENSMUST00000180138 384 ntBASIC9.01□□□□□ -0.97
Hoxc9P09633 Gm26898-201ENSMUST00000181678 384 ntBASIC9.01□□□□□ -0.97
Hoxc9P09633 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC9.01□□□□□ -0.97
Hoxc9P09633 Gm43689-201ENSMUST00000195951 427 ntBASIC9.01□□□□□ -0.97
Hoxc9P09633 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Hoxc9P09633 Gm44121-201ENSMUST00000205169 2006 ntBASIC9.01□□□□□ -0.97
Hoxc9P09633 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC9.01□□□□□ -0.97
Hoxc9P09633 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Hoxc9P09633 Gm2139-201ENSMUST00000222569 1075 ntBASIC9.01□□□□□ -0.97
Hoxc9P09633 CT009713.1-201ENSMUST00000224828 853 ntBASIC9.01□□□□□ -0.97
Hoxc9P09633 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Hoxc9P09633 Gm25587-201ENSMUST00000082498 166 ntBASIC9.01□□□□□ -0.97
Hoxc9P09633 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Hoxc9P09633 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Hoxc9P09633 Prdm16-206ENSMUST00000105638 8601 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Hoxc9P09633 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Hoxc9P09633 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC9.01□□□□□ -0.97
Hoxc9P09633 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Hoxc9P09633 Slfn4-202ENSMUST00000167596 3703 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Hoxc9P09633 D330045A20Rik-201ENSMUST00000046763 3737 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Hoxc9P09633 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Hoxc9P09633 Olfr259-203ENSMUST00000215828 4095 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Hoxc9P09633 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC9□□□□□ -0.97
Hoxc9P09633 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC9□□□□□ -0.97
Hoxc9P09633 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Hoxc9P09633 Exoc4-201ENSMUST00000052266 4824 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Hoxc9P09633 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms