Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm15455-201ENSMUST00000117459 2557 ntBASIC6.65□□□□□ -1.34
Hoxd3P09027 Hypk-202ENSMUST00000110612 4170 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Hoxd3P09027 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Hoxd3P09027 Slc26a8-201ENSMUST00000114764 3670 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Hoxd3P09027 Gm45512-201ENSMUST00000210432 1553 ntBASIC6.65□□□□□ -1.34
Hoxd3P09027 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC6.65□□□□□ -1.34
Hoxd3P09027 Zfp473-201ENSMUST00000060270 3800 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
Hoxd3P09027 Nron-203ENSMUST00000156297 3340 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Hoxd3P09027 Tacc2-202ENSMUST00000059145 3906 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
Hoxd3P09027 Bcas1-201ENSMUST00000013667 2916 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
Hoxd3P09027 Fut10-203ENSMUST00000161502 3527 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
Hoxd3P09027 Fam90a1b-203ENSMUST00000113903 1760 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Hoxd3P09027 Fgr-204ENSMUST00000171223 2398 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Hoxd3P09027 Kif3c-204ENSMUST00000219895 2962 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Hoxd3P09027 Gm38012-201ENSMUST00000193022 3029 ntBASIC6.65□□□□□ -1.34
Hoxd3P09027 AC114002.1-201ENSMUST00000218097 2409 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Hoxd3P09027 Akap2-205ENSMUST00000102903 6650 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Hoxd3P09027 D3Ertd254e-202ENSMUST00000197653 6689 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Hoxd3P09027 Tmem175-203ENSMUST00000120327 1811 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Hoxd3P09027 Gcm2-201ENSMUST00000021791 3073 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Hoxd3P09027 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Hoxd3P09027 Def8-204ENSMUST00000108830 3191 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
Hoxd3P09027 Olfr1110-202ENSMUST00000152758 3159 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
Hoxd3P09027 Gm25111-201ENSMUST00000116686 147 ntBASIC6.65□□□□□ -1.34
Hoxd3P09027 Mir467f-201ENSMUST00000116923 120 ntBASIC6.65□□□□□ -1.34
Hoxd3P09027 Amd-ps4-201ENSMUST00000118392 1003 ntBASIC6.65□□□□□ -1.34
Hoxd3P09027 Gm5388-201ENSMUST00000120059 1117 ntBASIC6.65□□□□□ -1.34
Hoxd3P09027 Gm14600-201ENSMUST00000121032 630 ntBASIC6.65□□□□□ -1.34
Hoxd3P09027 Gm14515-201ENSMUST00000121327 216 ntBASIC6.65□□□□□ -1.34
Hoxd3P09027 Gm4908-201ENSMUST00000121923 1005 ntBASIC6.65□□□□□ -1.34
Hoxd3P09027 Gm11953-201ENSMUST00000122352 1003 ntBASIC6.65□□□□□ -1.34
Hoxd3P09027 Gm11537-201ENSMUST00000124865 791 ntTSL 3 BASIC6.65□□□□□ -1.34
Hoxd3P09027 Cul1-203ENSMUST00000143941 530 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Hoxd3P09027 Gm8093-203ENSMUST00000144982 1020 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Hoxd3P09027 9630013K17Rik-201ENSMUST00000146915 1072 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Hoxd3P09027 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC6.65□□□□□ -1.34
Hoxd3P09027 Gm11468-201ENSMUST00000152987 383 ntTSL 2 BASIC6.65□□□□□ -1.34
Hoxd3P09027 Gm25559-201ENSMUST00000157182 74 ntBASIC6.65□□□□□ -1.34
Hoxd3P09027 Gm25667-201ENSMUST00000157701 275 ntBASIC6.65□□□□□ -1.34
Hoxd3P09027 Gm8256-201ENSMUST00000169178 453 ntBASIC6.65□□□□□ -1.34
Hoxd3P09027 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC6.65□□□□□ -1.34
Hoxd3P09027 Gm4287-201ENSMUST00000174329 585 ntBASIC6.65□□□□□ -1.34
Hoxd3P09027 Vmn2r-ps52-201ENSMUST00000176211 612 ntBASIC6.65□□□□□ -1.34
Hoxd3P09027 Gm10591-201ENSMUST00000178168 402 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Hoxd3P09027 Ccl21b-202ENSMUST00000178864 402 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Hoxd3P09027 Gm12117-201ENSMUST00000183831 456 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Hoxd3P09027 Gm18821-201ENSMUST00000184135 709 ntBASIC6.65□□□□□ -1.34
Hoxd3P09027 Gm28609-201ENSMUST00000186515 463 ntTSL 3 BASIC6.65□□□□□ -1.34
Hoxd3P09027 Gm28677-202ENSMUST00000186904 615 ntBASIC6.65□□□□□ -1.34
Hoxd3P09027 2210420H20Rik-201ENSMUST00000188435 629 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Hoxd3P09027 Gm28404-201ENSMUST00000190242 453 ntBASIC6.65□□□□□ -1.34
Hoxd3P09027 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Hoxd3P09027 Gm36398-201ENSMUST00000192255 696 ntBASIC6.65□□□□□ -1.34
Hoxd3P09027 Gm18952-201ENSMUST00000194471 846 ntBASIC6.65□□□□□ -1.34
Hoxd3P09027 Gm30312-201ENSMUST00000194516 696 ntBASIC6.65□□□□□ -1.34
Hoxd3P09027 Gm43012-201ENSMUST00000198569 937 ntBASIC6.65□□□□□ -1.34
Hoxd3P09027 Igkv12-42-201ENSMUST00000198769 327 ntBASIC6.65□□□□□ -1.34
Hoxd3P09027 Gm44306-201ENSMUST00000203058 203 ntBASIC6.65□□□□□ -1.34
Hoxd3P09027 Gm45226-201ENSMUST00000206602 288 ntBASIC6.65□□□□□ -1.34
Hoxd3P09027 Gm34853-201ENSMUST00000211662 509 ntTSL 5 BASIC6.65□□□□□ -1.34
Hoxd3P09027 1700030E10Rik-201ENSMUST00000218164 721 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Hoxd3P09027 AC158803.2-201ENSMUST00000219452 679 ntBASIC6.65□□□□□ -1.34
Hoxd3P09027 Zfp429-203ENSMUST00000224684 524 ntBASIC6.65□□□□□ -1.34
Hoxd3P09027 AC158983.1-201ENSMUST00000225691 221 ntBASIC6.65□□□□□ -1.34
Hoxd3P09027 AC142114.1-201ENSMUST00000227724 328 ntBASIC6.65□□□□□ -1.34
Hoxd3P09027 1700009N14Rik-201ENSMUST00000029955 1258 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Hoxd3P09027 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Hoxd3P09027 Asb12-201ENSMUST00000033549 1258 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Hoxd3P09027 Gm10260-201ENSMUST00000074072 561 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Hoxd3P09027 Rps7-201ENSMUST00000074267 954 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Hoxd3P09027 Gm4825-201ENSMUST00000079690 408 ntBASIC6.65□□□□□ -1.34
Hoxd3P09027 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Hoxd3P09027 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC6.65□□□□□ -1.34
Hoxd3P09027 Snhg7os-202ENSMUST00000131841 3947 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Hoxd3P09027 Olfr954-202ENSMUST00000214818 3299 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
Hoxd3P09027 4430402I18Rik-208ENSMUST00000179171 2638 ntTSL 5 BASIC6.65□□□□□ -1.34
Hoxd3P09027 Nod2-202ENSMUST00000109634 4666 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
Hoxd3P09027 Sub1-201ENSMUST00000022816 3372 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Hoxd3P09027 Skp2-202ENSMUST00000110585 6185 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Hoxd3P09027 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Hoxd3P09027 Gm20531-201ENSMUST00000174861 1373 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Hoxd3P09027 Gm44289-201ENSMUST00000204144 1390 ntBASIC6.65□□□□□ -1.35
Hoxd3P09027 Gm15728-201ENSMUST00000140833 3492 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Hoxd3P09027 A230059L01Rik-201ENSMUST00000126596 2813 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Hoxd3P09027 AC122397.1-201ENSMUST00000228650 2819 ntBASIC6.65□□□□□ -1.35
Hoxd3P09027 Gm8232-201ENSMUST00000164277 1402 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Hoxd3P09027 Gm7954-201ENSMUST00000164967 1403 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Hoxd3P09027 Gm8082-201ENSMUST00000165349 1403 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Hoxd3P09027 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Hoxd3P09027 Gm7980-201ENSMUST00000168107 1403 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Hoxd3P09027 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Hoxd3P09027 Gm17027-201ENSMUST00000171202 1403 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Hoxd3P09027 0610031O16Rik-203ENSMUST00000185046 1429 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Hoxd3P09027 Kcnj15-201ENSMUST00000037154 5089 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Hoxd3P09027 Ptafr-201ENSMUST00000070690 3637 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Hoxd3P09027 Chrdl2-202ENSMUST00000107084 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
Hoxd3P09027 Gm3854-201ENSMUST00000207173 2950 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Hoxd3P09027 Nemp1-201ENSMUST00000048099 6002 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.35
Hoxd3P09027 Gm37266-201ENSMUST00000193802 2287 ntBASIC6.65□□□□□ -1.35
Hoxd3P09027 Gm15328-204ENSMUST00000210330 1518 ntTSL 5 BASIC6.65□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms