Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC7.06□□□□□ -1.28
CopeO89079 Gm43961-201ENSMUST00000203289 1872 ntBASIC7.06□□□□□ -1.28
CopeO89079 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC7.06□□□□□ -1.28
CopeO89079 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CopeO89079 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CopeO89079 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CopeO89079 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC7.06□□□□□ -1.28
CopeO89079 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC7.06□□□□□ -1.28
CopeO89079 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC7.06□□□□□ -1.28
CopeO89079 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
CopeO89079 Gm43395-201ENSMUST00000198717 2240 ntBASIC7.05□□□□□ -1.28
CopeO89079 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
CopeO89079 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
CopeO89079 Lrrc46-201ENSMUST00000021251 1336 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CopeO89079 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CopeO89079 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CopeO89079 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
CopeO89079 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CopeO89079 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
CopeO89079 Olfr305-204ENSMUST00000216700 3734 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
CopeO89079 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CopeO89079 Gm7945-201ENSMUST00000164948 1428 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
CopeO89079 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC7.05□□□□□ -1.28
CopeO89079 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CopeO89079 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
CopeO89079 Mir678-201ENSMUST00000102114 84 ntBASIC7.05□□□□□ -1.28
CopeO89079 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CopeO89079 Gm13196-201ENSMUST00000118297 379 ntBASIC7.05□□□□□ -1.28
CopeO89079 Gm11444-201ENSMUST00000146433 575 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
CopeO89079 4930403D09Rik-201ENSMUST00000147359 635 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CopeO89079 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CopeO89079 Gm15787-207ENSMUST00000152014 885 ntTSL 2 BASIC7.05□□□□□ -1.28
CopeO89079 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CopeO89079 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC7.05□□□□□ -1.28
CopeO89079 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CopeO89079 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC7.05□□□□□ -1.28
CopeO89079 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
CopeO89079 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
CopeO89079 Gm26736-201ENSMUST00000180425 1236 ntBASIC7.05□□□□□ -1.28
CopeO89079 Rps19-ps6-201ENSMUST00000181233 438 ntBASIC7.05□□□□□ -1.28
CopeO89079 Gm5181-201ENSMUST00000183140 971 ntBASIC7.05□□□□□ -1.28
CopeO89079 Mir6239-201ENSMUST00000183564 105 ntBASIC7.05□□□□□ -1.28
CopeO89079 Gm37260-201ENSMUST00000193748 1251 ntBASIC7.05□□□□□ -1.28
CopeO89079 Gm37017-201ENSMUST00000195266 747 ntBASIC7.05□□□□□ -1.28
CopeO89079 1700021F02Rik-201ENSMUST00000197576 350 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CopeO89079 Gm17833-201ENSMUST00000197629 1065 ntBASIC7.05□□□□□ -1.28
CopeO89079 Gm42887-201ENSMUST00000202469 1119 ntBASIC7.05□□□□□ -1.28
CopeO89079 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CopeO89079 Gm44565-201ENSMUST00000208194 269 ntBASIC7.05□□□□□ -1.28
CopeO89079 Gm30808-201ENSMUST00000211166 845 ntTSL 5 BASIC7.05□□□□□ -1.28
CopeO89079 Gm19228-201ENSMUST00000214030 717 ntBASIC7.05□□□□□ -1.28
CopeO89079 AC132237.3-201ENSMUST00000220867 549 ntTSL 2 BASIC7.05□□□□□ -1.28
CopeO89079 AC139941.1-201ENSMUST00000221517 478 ntBASIC7.05□□□□□ -1.28
CopeO89079 AC156576.3-201ENSMUST00000221940 452 ntTSL 5 BASIC7.05□□□□□ -1.28
CopeO89079 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
CopeO89079 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
CopeO89079 Spata31d1d-201ENSMUST00000052978 3827 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
CopeO89079 Gm9837-201ENSMUST00000057722 731 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
CopeO89079 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CopeO89079 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CopeO89079 Gm43279-201ENSMUST00000202376 2512 ntBASIC7.05□□□□□ -1.28
CopeO89079 Gm43557-201ENSMUST00000197100 2370 ntBASIC7.05□□□□□ -1.28
CopeO89079 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC7.05□□□□□ -1.28
CopeO89079 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CopeO89079 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
CopeO89079 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
CopeO89079 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CopeO89079 C030015A19Rik-201ENSMUST00000203368 2551 ntBASIC7.05□□□□□ -1.28
CopeO89079 4930548H24Rik-201ENSMUST00000031020 1641 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CopeO89079 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CopeO89079 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CopeO89079 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CopeO89079 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CopeO89079 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC7.04□□□□□ -1.28
CopeO89079 Gm19024-201ENSMUST00000194681 1319 ntBASIC7.04□□□□□ -1.28
CopeO89079 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CopeO89079 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CopeO89079 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
CopeO89079 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
CopeO89079 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
CopeO89079 Sdcbp-202ENSMUST00000103008 2086 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
CopeO89079 Olfr1175-ps-201ENSMUST00000214207 5552 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
CopeO89079 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CopeO89079 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
CopeO89079 Gm25614-201ENSMUST00000104013 133 ntBASIC7.04□□□□□ -1.28
CopeO89079 Gm23484-201ENSMUST00000104178 131 ntBASIC7.04□□□□□ -1.28
CopeO89079 Gm12321-201ENSMUST00000121485 804 ntBASIC7.04□□□□□ -1.28
CopeO89079 Gm26662-201ENSMUST00000181129 548 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CopeO89079 Gm5261-201ENSMUST00000185860 713 ntBASIC7.04□□□□□ -1.28
CopeO89079 Gm28142-201ENSMUST00000186899 698 ntBASIC7.04□□□□□ -1.28
CopeO89079 Gm20917-202ENSMUST00000188706 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CopeO89079 Gm28341-201ENSMUST00000190883 472 ntBASIC7.04□□□□□ -1.28
CopeO89079 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CopeO89079 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CopeO89079 Gm36448-201ENSMUST00000199916 438 ntBASIC7.04□□□□□ -1.28
CopeO89079 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CopeO89079 Gm44705-201ENSMUST00000206719 339 ntBASIC7.04□□□□□ -1.28
CopeO89079 Tmem156-206ENSMUST00000212640 1271 ntTSL 5 BASIC7.04□□□□□ -1.28
CopeO89079 Gm18655-201ENSMUST00000214802 1090 ntBASIC7.04□□□□□ -1.28
CopeO89079 Gm34047-201ENSMUST00000223547 606 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 116.4 ms