Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm6819-201ENSMUST00000185325 1891 ntBASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 Plscr2-201ENSMUST00000034932 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 Gm29670-201ENSMUST00000190228 2491 ntBASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 Usp40-204ENSMUST00000187758 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 Vmn1r58-204ENSMUST00000228728 9991 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 Mphosph9-211ENSMUST00000184951 5008 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 Lrrfip2-206ENSMUST00000197241 1500 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 Gm38288-201ENSMUST00000195330 1320 ntBASIC6.76□□□□□ -1.33
Pcdh1F7BJK1 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Psd4-202ENSMUST00000102942 11265 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Ssr3-201ENSMUST00000029414 2957 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Dip2b-203ENSMUST00000108971 8127 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 AC153729.1-201ENSMUST00000214055 2562 ntBASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Gm16072-201ENSMUST00000119574 2377 ntBASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Gm37984-201ENSMUST00000191641 3733 ntBASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Gm44550-201ENSMUST00000207311 2058 ntBASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Gm37925-201ENSMUST00000195352 4255 ntBASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Pabpc4l-201ENSMUST00000166505 5218 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Gm42455-201ENSMUST00000199761 2736 ntBASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Gm12295-201ENSMUST00000128453 3189 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Ttc17-201ENSMUST00000055081 3163 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 4930449I24Rik-201ENSMUST00000110598 1168 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Gm5915-201ENSMUST00000116136 454 ntBASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Gm11901-201ENSMUST00000120412 437 ntBASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Gm11358-201ENSMUST00000122310 373 ntBASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Apela-202ENSMUST00000142822 975 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Gm14642-201ENSMUST00000147357 470 ntTSL 3 BASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Gm22424-201ENSMUST00000158527 87 ntBASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 n-R5s115-201ENSMUST00000179019 119 ntBASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Rps12-ps22-201ENSMUST00000179382 402 ntBASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Gm27033-201ENSMUST00000183226 544 ntBASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 AV026068-210ENSMUST00000189169 877 ntTSL 5 BASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Gm29439-201ENSMUST00000189996 509 ntTSL 3 BASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Gm42997-201ENSMUST00000196074 918 ntTSL 3 BASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Gm44471-201ENSMUST00000197963 100 ntBASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 1700008B11Rik-201ENSMUST00000198145 634 ntBASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Gm31520-201ENSMUST00000203048 733 ntBASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Gm45475-201ENSMUST00000209381 309 ntBASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Gm45382-201ENSMUST00000210607 151 ntBASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Gm20946-201ENSMUST00000212367 461 ntBASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Olfr1010-201ENSMUST00000216831 1270 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Gm21321-201ENSMUST00000220179 446 ntBASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Gm7986-201ENSMUST00000221336 551 ntBASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 AV026068-219ENSMUST00000224148 933 ntBASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 AV026068-220ENSMUST00000224153 1147 ntBASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 AV026068-224ENSMUST00000224827 928 ntBASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Cypt2-201ENSMUST00000041758 697 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Cst13-201ENSMUST00000046589 783 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 n-R5s193-201ENSMUST00000082864 109 ntBASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Gm10704-201ENSMUST00000098952 730 ntBASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Gm42613-201ENSMUST00000199975 1931 ntBASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Lin54-204ENSMUST00000137750 4056 ntTSL 5 BASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Cabyr-207ENSMUST00000191078 1642 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Olfr605-202ENSMUST00000215417 2921 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Ston2-201ENSMUST00000052969 9896 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Gm14849-201ENSMUST00000122293 2846 ntBASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Gal3st2c-201ENSMUST00000097632 9667 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Gm17300-201ENSMUST00000172202 1527 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Heatr1-201ENSMUST00000059270 6780 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Olfr727-202ENSMUST00000215317 2616 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Gm6866-201ENSMUST00000188559 2549 ntBASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Gm42969-201ENSMUST00000199858 3631 ntBASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Pabpc4l-202ENSMUST00000192793 5252 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Olfr370-202ENSMUST00000209408 4600 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Ttc39d-202ENSMUST00000134652 2438 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
Pcdh1F7BJK1 Kcnj15-205ENSMUST00000113858 5309 ntTSL 5 BASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Tctex1d1-202ENSMUST00000116317 1772 ntAPPRIS P3 TSL 5 BASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Gm45528-201ENSMUST00000209854 3145 ntBASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Ace2-202ENSMUST00000112271 3578 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Vmn2r105-201ENSMUST00000167382 2583 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Rnf24-204ENSMUST00000165420 5833 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
Pcdh1F7BJK1 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 95.7 ms