Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm5645-201ENSMUST00000179597 714 ntBASIC6.69□□□□□ -1.34
Col6a3E9PWQ3 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC6.69□□□□□ -1.34
Col6a3E9PWQ3 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC6.69□□□□□ -1.34
Col6a3E9PWQ3 Btbd10-202ENSMUST00000117577 2384 ntAPPRIS ALT1 TSL 5 BASIC6.69□□□□□ -1.34
Col6a3E9PWQ3 AC115746.1-201ENSMUST00000228949 3617 ntBASIC6.69□□□□□ -1.34
Col6a3E9PWQ3 Dbhos-201ENSMUST00000150024 4020 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Col6a3E9PWQ3 Ganc-205ENSMUST00000135074 4780 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
Col6a3E9PWQ3 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Col6a3E9PWQ3 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col6a3E9PWQ3 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col6a3E9PWQ3 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC6.69□□□□□ -1.34
Col6a3E9PWQ3 Rbbp4-201ENSMUST00000102598 4407 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col6a3E9PWQ3 Olfr523-206ENSMUST00000216023 3940 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Col6a3E9PWQ3 Heatr6-201ENSMUST00000001002 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col6a3E9PWQ3 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC6.69□□□□□ -1.34
Col6a3E9PWQ3 Cd300a-202ENSMUST00000106582 4645 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col6a3E9PWQ3 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Col6a3E9PWQ3 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col6a3E9PWQ3 Kcnab1-201ENSMUST00000049230 3245 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col6a3E9PWQ3 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col6a3E9PWQ3 Gm26078-201ENSMUST00000104067 128 ntBASIC6.69□□□□□ -1.34
Col6a3E9PWQ3 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC6.69□□□□□ -1.34
Col6a3E9PWQ3 Gm25374-201ENSMUST00000158158 101 ntBASIC6.69□□□□□ -1.34
Col6a3E9PWQ3 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC6.69□□□□□ -1.34
Col6a3E9PWQ3 Gm22548-201ENSMUST00000174899 78 ntBASIC6.69□□□□□ -1.34
Col6a3E9PWQ3 Gm24824-201ENSMUST00000175097 78 ntBASIC6.69□□□□□ -1.34
Col6a3E9PWQ3 Gm28620-201ENSMUST00000190463 439 ntBASIC6.69□□□□□ -1.34
Col6a3E9PWQ3 Igkv4-75-201ENSMUST00000197204 359 ntBASIC6.69□□□□□ -1.34
Col6a3E9PWQ3 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC6.69□□□□□ -1.34
Col6a3E9PWQ3 Vmn2r-ps61-201ENSMUST00000207286 889 ntBASIC6.69□□□□□ -1.34
Col6a3E9PWQ3 AC102287.1-201ENSMUST00000211412 454 ntBASIC6.69□□□□□ -1.34
Col6a3E9PWQ3 AC154861.1-201ENSMUST00000223767 800 ntBASIC6.69□□□□□ -1.34
Col6a3E9PWQ3 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col6a3E9PWQ3 Mir135a-1-201ENSMUST00000083473 90 ntBASIC6.69□□□□□ -1.34
Col6a3E9PWQ3 Meis2-205ENSMUST00000110907 3718 ntAPPRIS ALT1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col6a3E9PWQ3 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col6a3E9PWQ3 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Col6a3E9PWQ3 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col6a3E9PWQ3 Olfr1006-201ENSMUST00000099917 1529 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
Col6a3E9PWQ3 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Col6a3E9PWQ3 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col6a3E9PWQ3 Gm14175-201ENSMUST00000119835 241 ntBASIC6.68□□□□□ -1.34
Col6a3E9PWQ3 Gm6062-201ENSMUST00000120462 631 ntBASIC6.68□□□□□ -1.34
Col6a3E9PWQ3 Gm20615-201ENSMUST00000177503 705 ntBASIC6.68□□□□□ -1.34
Col6a3E9PWQ3 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col6a3E9PWQ3 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC6.68□□□□□ -1.34
Col6a3E9PWQ3 Gm37436-201ENSMUST00000193842 1085 ntBASIC6.68□□□□□ -1.34
Col6a3E9PWQ3 Gm42720-201ENSMUST00000196813 300 ntBASIC6.68□□□□□ -1.34
Col6a3E9PWQ3 AC134254.2-201ENSMUST00000221262 170 ntBASIC6.68□□□□□ -1.34
Col6a3E9PWQ3 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Col6a3E9PWQ3 Mstn-201ENSMUST00000027269 2705 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col6a3E9PWQ3 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Col6a3E9PWQ3 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col6a3E9PWQ3 Ift81-201ENSMUST00000031426 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col6a3E9PWQ3 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col6a3E9PWQ3 Nsd2-204ENSMUST00000114397 5738 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Col6a3E9PWQ3 Gm37457-201ENSMUST00000193639 2433 ntBASIC6.68□□□□□ -1.34
Col6a3E9PWQ3 Ppih-204ENSMUST00000106319 622 ntTSL 3 BASIC6.68□□□□□ -1.34
Col6a3E9PWQ3 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC6.68□□□□□ -1.34
Col6a3E9PWQ3 1700052I22Rik-201ENSMUST00000190431 379 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Col6a3E9PWQ3 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC6.68□□□□□ -1.34
Col6a3E9PWQ3 Gm43467-201ENSMUST00000197441 437 ntBASIC6.68□□□□□ -1.34
Col6a3E9PWQ3 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC6.68□□□□□ -1.34
Col6a3E9PWQ3 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Col6a3E9PWQ3 4930480K23Rik-201ENSMUST00000180465 3326 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Col6a3E9PWQ3 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col6a3E9PWQ3 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC6.68□□□□□ -1.34
Col6a3E9PWQ3 AC140280.1-201ENSMUST00000227826 1847 ntBASIC6.68□□□□□ -1.34
Col6a3E9PWQ3 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Col6a3E9PWQ3 Ncoa7-209ENSMUST00000216172 2026 ntAPPRIS ALT1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col6a3E9PWQ3 Drosha-201ENSMUST00000090292 4519 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col6a3E9PWQ3 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Col6a3E9PWQ3 3110099E03Rik-202ENSMUST00000134580 2644 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Col6a3E9PWQ3 Gm26744-201ENSMUST00000181834 1731 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Col6a3E9PWQ3 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Col6a3E9PWQ3 Gm6614-201ENSMUST00000111832 1953 ntAPPRIS P2 TSL 5 BASIC6.68□□□□□ -1.34
Col6a3E9PWQ3 Gm12936-201ENSMUST00000121439 301 ntBASIC6.68□□□□□ -1.34
Col6a3E9PWQ3 Gm28952-201ENSMUST00000189285 681 ntBASIC6.68□□□□□ -1.34
Col6a3E9PWQ3 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC6.68□□□□□ -1.34
Col6a3E9PWQ3 Gm44259-201ENSMUST00000204996 298 ntBASIC6.68□□□□□ -1.34
Col6a3E9PWQ3 Gm9292-201ENSMUST00000222008 710 ntBASIC6.68□□□□□ -1.34
Col6a3E9PWQ3 Zfp663-202ENSMUST00000103085 3451 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col6a3E9PWQ3 Gm42519-201ENSMUST00000199282 3656 ntBASIC6.68□□□□□ -1.34
Col6a3E9PWQ3 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Col6a3E9PWQ3 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Col6a3E9PWQ3 Gm36933-201ENSMUST00000194945 3071 ntBASIC6.67□□□□□ -1.34
Col6a3E9PWQ3 Pum1-204ENSMUST00000105991 4614 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Col6a3E9PWQ3 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Col6a3E9PWQ3 Rab7b-202ENSMUST00000064679 4498 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Col6a3E9PWQ3 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Col6a3E9PWQ3 Smarcal1-207ENSMUST00000152225 2994 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Col6a3E9PWQ3 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Col6a3E9PWQ3 Olfr1394-202ENSMUST00000216273 3024 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Col6a3E9PWQ3 Abr-201ENSMUST00000065028 4444 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Col6a3E9PWQ3 Gpbp1l1-202ENSMUST00000106475 2642 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Col6a3E9PWQ3 Mapk10-202ENSMUST00000112846 2617 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Col6a3E9PWQ3 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC6.67□□□□□ -1.34
Col6a3E9PWQ3 Gm12482-201ENSMUST00000120435 630 ntBASIC6.67□□□□□ -1.34
Col6a3E9PWQ3 Gm24295-201ENSMUST00000158298 131 ntBASIC6.67□□□□□ -1.34
Col6a3E9PWQ3 Olfr1215-201ENSMUST00000188399 943 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 100.7 ms