Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Clrn2B2RVW2 Acss2os-201ENSMUST00000148685 629 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Clrn2B2RVW2 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Clrn2B2RVW2 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC8.12□□□□□ -1.11
Clrn2B2RVW2 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC8.12□□□□□ -1.11
Clrn2B2RVW2 Gm23968-201ENSMUST00000175047 125 ntBASIC8.12□□□□□ -1.11
Clrn2B2RVW2 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Clrn2B2RVW2 Gm28846-201ENSMUST00000189161 368 ntBASIC8.12□□□□□ -1.11
Clrn2B2RVW2 Gm37322-201ENSMUST00000193409 337 ntBASIC8.12□□□□□ -1.11
Clrn2B2RVW2 Gm37285-201ENSMUST00000194465 1139 ntBASIC8.12□□□□□ -1.11
Clrn2B2RVW2 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC8.12□□□□□ -1.11
Clrn2B2RVW2 AC138329.1-201ENSMUST00000225040 471 ntBASIC8.12□□□□□ -1.11
Clrn2B2RVW2 AC164436.1-201ENSMUST00000227074 772 ntBASIC8.12□□□□□ -1.11
Clrn2B2RVW2 AC105324.1-201ENSMUST00000227844 386 ntBASIC8.12□□□□□ -1.11
Clrn2B2RVW2 AC154806.5-204ENSMUST00000228900 867 ntBASIC8.12□□□□□ -1.11
Clrn2B2RVW2 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC8.12□□□□□ -1.11
Clrn2B2RVW2 Cyp2c44-202ENSMUST00000211830 1557 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Clrn2B2RVW2 Gm43519-201ENSMUST00000197239 1872 ntBASIC8.12□□□□□ -1.11
Clrn2B2RVW2 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Clrn2B2RVW2 Arl15-201ENSMUST00000091201 3364 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Clrn2B2RVW2 Olfr316-202ENSMUST00000215071 2719 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Clrn2B2RVW2 Parp8-203ENSMUST00000223949 2965 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Clrn2B2RVW2 Rapgef5-205ENSMUST00000222105 2677 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Clrn2B2RVW2 C79798-201ENSMUST00000131588 1793 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Clrn2B2RVW2 Gm8844-201ENSMUST00000119460 2614 ntBASIC8.12□□□□□ -1.11
Clrn2B2RVW2 Vmn1r52-203ENSMUST00000227100 2307 ntBASIC8.12□□□□□ -1.11
Clrn2B2RVW2 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Clrn2B2RVW2 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Clrn2B2RVW2 Spag9-204ENSMUST00000092777 6913 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Clrn2B2RVW2 Krba1-204ENSMUST00000114572 4323 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Clrn2B2RVW2 4930528G23Rik-201ENSMUST00000124575 1723 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Clrn2B2RVW2 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Clrn2B2RVW2 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Clrn2B2RVW2 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC8.12□□□□□ -1.11
Clrn2B2RVW2 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC8.11□□□□□ -1.11
Clrn2B2RVW2 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Clrn2B2RVW2 Vmn2r-ps96-201ENSMUST00000221218 2545 ntBASIC8.11□□□□□ -1.11
Clrn2B2RVW2 Grhl1-201ENSMUST00000020985 3070 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Clrn2B2RVW2 Dgkh-206ENSMUST00000228362 3308 ntBASIC8.11□□□□□ -1.11
Clrn2B2RVW2 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Clrn2B2RVW2 Gm37755-201ENSMUST00000195880 2179 ntBASIC8.11□□□□□ -1.11
Clrn2B2RVW2 Olfr96-203ENSMUST00000214482 2161 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Clrn2B2RVW2 Vmn2r-ps26-201ENSMUST00000202039 2111 ntBASIC8.11□□□□□ -1.11
Clrn2B2RVW2 Gm19024-201ENSMUST00000194681 1319 ntBASIC8.11□□□□□ -1.11
Clrn2B2RVW2 Gm4927-201ENSMUST00000219548 1318 ntBASIC8.11□□□□□ -1.11
Clrn2B2RVW2 Gm43534-201ENSMUST00000197685 2853 ntBASIC8.11□□□□□ -1.11
Clrn2B2RVW2 Map1b-201ENSMUST00000064762 11808 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Clrn2B2RVW2 Gm22953-201ENSMUST00000116724 101 ntBASIC8.11□□□□□ -1.11
Clrn2B2RVW2 Gm4992-201ENSMUST00000120256 768 ntBASIC8.11□□□□□ -1.11
Clrn2B2RVW2 Gm12920-201ENSMUST00000121818 1186 ntBASIC8.11□□□□□ -1.11
Clrn2B2RVW2 Gm11581-201ENSMUST00000122024 763 ntBASIC8.11□□□□□ -1.11
Clrn2B2RVW2 Gm23430-201ENSMUST00000122490 314 ntBASIC8.11□□□□□ -1.11
Clrn2B2RVW2 Gm24383-201ENSMUST00000122691 333 ntBASIC8.11□□□□□ -1.11
Clrn2B2RVW2 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Clrn2B2RVW2 Gm16006-201ENSMUST00000160938 566 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Clrn2B2RVW2 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Clrn2B2RVW2 Gm27018-201ENSMUST00000181136 225 ntBASIC8.11□□□□□ -1.11
Clrn2B2RVW2 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC8.11□□□□□ -1.11
Clrn2B2RVW2 Gm21301-201ENSMUST00000189476 699 ntBASIC8.11□□□□□ -1.11
Clrn2B2RVW2 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC8.11□□□□□ -1.11
Clrn2B2RVW2 Gm43867-201ENSMUST00000203860 525 ntBASIC8.11□□□□□ -1.11
Clrn2B2RVW2 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC8.11□□□□□ -1.11
Clrn2B2RVW2 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Clrn2B2RVW2 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC8.11□□□□□ -1.11
Clrn2B2RVW2 Gm9800-201ENSMUST00000052615 336 ntBASIC8.11□□□□□ -1.11
Clrn2B2RVW2 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Clrn2B2RVW2 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Clrn2B2RVW2 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Clrn2B2RVW2 Itga2-201ENSMUST00000056117 7108 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Clrn2B2RVW2 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC8.11□□□□□ -1.11
Clrn2B2RVW2 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Clrn2B2RVW2 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Clrn2B2RVW2 Fam216b-201ENSMUST00000066437 2241 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Clrn2B2RVW2 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Clrn2B2RVW2 Cdh23-201ENSMUST00000073242 10688 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Clrn2B2RVW2 Olfr285-202ENSMUST00000216901 5330 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Clrn2B2RVW2 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Clrn2B2RVW2 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Clrn2B2RVW2 Olfr517-202ENSMUST00000216500 2139 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Clrn2B2RVW2 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Clrn2B2RVW2 Clcn7-204ENSMUST00000160961 3983 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Clrn2B2RVW2 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Clrn2B2RVW2 Nin-202ENSMUST00000085314 9675 ntAPPRIS P4 TSL 1 (best) BASIC8.1□□□□□ -1.11
Clrn2B2RVW2 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Clrn2B2RVW2 Gm43679-201ENSMUST00000197051 3677 ntBASIC8.1□□□□□ -1.11
Clrn2B2RVW2 Ctsc-203ENSMUST00000131108 3220 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Clrn2B2RVW2 Zfp661-201ENSMUST00000077422 2765 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Clrn2B2RVW2 Gm25724-201ENSMUST00000104531 117 ntBASIC8.1□□□□□ -1.11
Clrn2B2RVW2 Gm11271-201ENSMUST00000116054 440 ntBASIC8.1□□□□□ -1.11
Clrn2B2RVW2 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC8.1□□□□□ -1.11
Clrn2B2RVW2 Cfhr3-201ENSMUST00000170441 1022 ntBASIC8.1□□□□□ -1.11
Clrn2B2RVW2 Gm29784-201ENSMUST00000196217 406 ntBASIC8.1□□□□□ -1.11
Clrn2B2RVW2 Gm8190-201ENSMUST00000199603 586 ntBASIC8.1□□□□□ -1.11
Clrn2B2RVW2 Gm43762-201ENSMUST00000201521 295 ntBASIC8.1□□□□□ -1.11
Clrn2B2RVW2 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC8.1□□□□□ -1.11
Clrn2B2RVW2 Gm45782-201ENSMUST00000212670 366 ntBASIC8.1□□□□□ -1.11
Clrn2B2RVW2 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
Clrn2B2RVW2 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC8.1□□□□□ -1.11
Clrn2B2RVW2 AW822073-201ENSMUST00000075305 555 ntBASIC8.1□□□□□ -1.11
Clrn2B2RVW2 Gm22351-201ENSMUST00000083925 107 ntBASIC8.1□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms