Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Rhox4b-201ENSMUST00000096458 887 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Gm12887B1AVM1 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Gm12887B1AVM1 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Gm12887B1AVM1 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Gm12887B1AVM1 1700012E03Rik-201ENSMUST00000186237 1377 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Gm12887B1AVM1 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Gm12887B1AVM1 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Gm12887B1AVM1 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Gm12887B1AVM1 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Gm12887B1AVM1 Gm43515-201ENSMUST00000197930 2141 ntBASIC5.5□□□□□ -1.53
Gm12887B1AVM1 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Gm12887B1AVM1 Gm44039-201ENSMUST00000204192 2246 ntBASIC5.5□□□□□ -1.53
Gm12887B1AVM1 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Gm12887B1AVM1 Gm45358-201ENSMUST00000209492 2305 ntBASIC5.49□□□□□ -1.53
Gm12887B1AVM1 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Gm12887B1AVM1 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Gm12887B1AVM1 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Gm12887B1AVM1 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Gm12887B1AVM1 Gm7945-201ENSMUST00000164948 1428 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Gm12887B1AVM1 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Gm12887B1AVM1 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
Gm12887B1AVM1 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Gm12887B1AVM1 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Gm12887B1AVM1 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
Gm12887B1AVM1 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Gm12887B1AVM1 BC053393-201ENSMUST00000050937 2020 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Gm12887B1AVM1 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
Gm12887B1AVM1 Mir697-201ENSMUST00000102316 109 ntBASIC5.49□□□□□ -1.53
Gm12887B1AVM1 Mir760-201ENSMUST00000103257 119 ntBASIC5.49□□□□□ -1.53
Gm12887B1AVM1 1700060C20Rik-201ENSMUST00000109506 605 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Gm12887B1AVM1 Gm14631-201ENSMUST00000119067 594 ntBASIC5.49□□□□□ -1.53
Gm12887B1AVM1 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC5.49□□□□□ -1.53
Gm12887B1AVM1 Gm1947-201ENSMUST00000122451 910 ntBASIC5.49□□□□□ -1.53
Gm12887B1AVM1 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC5.49□□□□□ -1.53
Gm12887B1AVM1 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Gm12887B1AVM1 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Gm12887B1AVM1 Arpp19-207ENSMUST00000169188 216 ntTSL 5 BASIC5.49□□□□□ -1.53
Gm12887B1AVM1 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC5.49□□□□□ -1.53
Gm12887B1AVM1 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC5.49□□□□□ -1.53
Gm12887B1AVM1 Trav9n-3-201ENSMUST00000177705 575 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Gm12887B1AVM1 Trav9d-3-201ENSMUST00000178252 575 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Gm12887B1AVM1 Gm20111-201ENSMUST00000184830 319 ntBASIC5.49□□□□□ -1.53
Gm12887B1AVM1 Gm28065-201ENSMUST00000185290 833 ntTSL 3 BASIC5.49□□□□□ -1.53
Gm12887B1AVM1 Gm17847-201ENSMUST00000188261 1127 ntBASIC5.49□□□□□ -1.53
Gm12887B1AVM1 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Gm12887B1AVM1 Gm36719-201ENSMUST00000219518 927 ntTSL 5 BASIC5.49□□□□□ -1.53
Gm12887B1AVM1 RMST_1.1-213ENSMUST00000220288 792 ntTSL 5 BASIC5.49□□□□□ -1.53
Gm12887B1AVM1 Gm5668-201ENSMUST00000220897 436 ntBASIC5.49□□□□□ -1.53
Gm12887B1AVM1 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Gm12887B1AVM1 AC131029.2-203ENSMUST00000228116 1244 ntBASIC5.49□□□□□ -1.53
Gm12887B1AVM1 4930415O20Rik-201ENSMUST00000023728 558 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Gm12887B1AVM1 Oosp1-201ENSMUST00000048214 972 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Gm12887B1AVM1 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Gm12887B1AVM1 Cldn34b2-201ENSMUST00000076671 1077 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Gm12887B1AVM1 Gm4825-201ENSMUST00000079690 408 ntBASIC5.49□□□□□ -1.53
Gm12887B1AVM1 Gm24613-201ENSMUST00000083266 130 ntBASIC5.49□□□□□ -1.53
Gm12887B1AVM1 n-R5s60-201ENSMUST00000083299 119 ntBASIC5.49□□□□□ -1.53
Gm12887B1AVM1 4933405D12Rik-201ENSMUST00000180557 1383 ntTSL 2 BASIC5.49□□□□□ -1.53
Gm12887B1AVM1 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Gm12887B1AVM1 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Gm12887B1AVM1 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Gm12887B1AVM1 Gm10650-202ENSMUST00000196581 1969 ntBASIC5.49□□□□□ -1.53
Gm12887B1AVM1 Lsmem1-202ENSMUST00000220951 2152 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Gm12887B1AVM1 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Gm12887B1AVM1 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Gm12887B1AVM1 AC116950.1-201ENSMUST00000226322 3250 ntBASIC5.49□□□□□ -1.53
Gm12887B1AVM1 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Gm12887B1AVM1 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC5.49□□□□□ -1.53
Gm12887B1AVM1 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Gm12887B1AVM1 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Gm12887B1AVM1 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC5.48□□□□□ -1.53
Gm12887B1AVM1 Rnase4-201ENSMUST00000022428 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Gm12887B1AVM1 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Gm12887B1AVM1 Dram2-203ENSMUST00000121034 2035 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Gm12887B1AVM1 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Gm12887B1AVM1 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Gm12887B1AVM1 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Gm12887B1AVM1 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Gm12887B1AVM1 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Gm12887B1AVM1 Gm23701-201ENSMUST00000103893 110 ntBASIC5.48□□□□□ -1.53
Gm12887B1AVM1 Olfr1396-202ENSMUST00000109201 1170 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
Gm12887B1AVM1 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Gm12887B1AVM1 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Gm12887B1AVM1 Gm12740-201ENSMUST00000118794 308 ntBASIC5.48□□□□□ -1.53
Gm12887B1AVM1 Gm11498-201ENSMUST00000120660 949 ntBASIC5.48□□□□□ -1.53
Gm12887B1AVM1 Rpl36-ps2-201ENSMUST00000136893 311 ntBASIC5.48□□□□□ -1.53
Gm12887B1AVM1 Dtx3-205ENSMUST00000137151 346 ntTSL 3 BASIC5.48□□□□□ -1.53
Gm12887B1AVM1 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC5.48□□□□□ -1.53
Gm12887B1AVM1 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Gm12887B1AVM1 Olfr443-ps1-201ENSMUST00000163240 915 ntBASIC5.48□□□□□ -1.53
Gm12887B1AVM1 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Gm12887B1AVM1 Pid1-203ENSMUST00000175996 892 ntTSL 3 BASIC5.48□□□□□ -1.53
Gm12887B1AVM1 9330179D12Rik-202ENSMUST00000180811 1001 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Gm12887B1AVM1 Gm28645-201ENSMUST00000185859 564 ntBASIC5.48□□□□□ -1.53
Gm12887B1AVM1 Gm43558-201ENSMUST00000200155 210 ntBASIC5.48□□□□□ -1.53
Gm12887B1AVM1 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC5.48□□□□□ -1.53
Gm12887B1AVM1 Olfr440-ps1-201ENSMUST00000204044 917 ntBASIC5.48□□□□□ -1.53
Gm12887B1AVM1 Mypopos-203ENSMUST00000206304 441 ntTSL 3 BASIC5.48□□□□□ -1.53
Gm12887B1AVM1 Gm44705-201ENSMUST00000206719 339 ntBASIC5.48□□□□□ -1.53
Gm12887B1AVM1 A26c2-201ENSMUST00000207359 997 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms