Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm2871-201ENSMUST00000179984 1204 ntBASIC7.64□□□□□ -1.19
Ddx56Q9D0R4 Gm5272-201ENSMUST00000182730 982 ntBASIC7.64□□□□□ -1.19
Ddx56Q9D0R4 9530018H14Rik-201ENSMUST00000192253 1243 ntBASIC7.64□□□□□ -1.19
Ddx56Q9D0R4 Gm42650-201ENSMUST00000197038 575 ntTSL 2 BASIC7.64□□□□□ -1.19
Ddx56Q9D0R4 Gm18747-201ENSMUST00000198129 648 ntBASIC7.64□□□□□ -1.19
Ddx56Q9D0R4 Gm43212-201ENSMUST00000198208 394 ntBASIC7.64□□□□□ -1.19
Ddx56Q9D0R4 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Ddx56Q9D0R4 Gm5154-201ENSMUST00000203971 399 ntBASIC7.64□□□□□ -1.19
Ddx56Q9D0R4 1700040L08Rik-201ENSMUST00000205011 541 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Ddx56Q9D0R4 Gm44044-201ENSMUST00000205178 1089 ntBASIC7.64□□□□□ -1.19
Ddx56Q9D0R4 Olfr1245-201ENSMUST00000214870 1062 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Ddx56Q9D0R4 AC120002.1-201ENSMUST00000218456 331 ntBASIC7.64□□□□□ -1.19
Ddx56Q9D0R4 Gm8616-201ENSMUST00000222175 1037 ntBASIC7.64□□□□□ -1.19
Ddx56Q9D0R4 Gm19154-201ENSMUST00000223330 940 ntBASIC7.64□□□□□ -1.19
Ddx56Q9D0R4 AC131117.2-203ENSMUST00000225886 950 ntBASIC7.64□□□□□ -1.19
Ddx56Q9D0R4 AC154806.1-203ENSMUST00000227370 1032 ntBASIC7.64□□□□□ -1.19
Ddx56Q9D0R4 AC139209.2-201ENSMUST00000227680 1208 ntBASIC7.64□□□□□ -1.19
Ddx56Q9D0R4 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Ddx56Q9D0R4 B230118H07Rik-201ENSMUST00000090513 969 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ddx56Q9D0R4 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Ddx56Q9D0R4 Vmn1r188-201ENSMUST00000091739 927 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Ddx56Q9D0R4 Timp1-201ENSMUST00000009530 833 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ddx56Q9D0R4 Trpm8-204ENSMUST00000171176 3723 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ddx56Q9D0R4 Stab2-201ENSMUST00000035288 8228 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ddx56Q9D0R4 Unc13b-215ENSMUST00000207569 14754 ntTSL 5 BASIC7.64□□□□□ -1.19
Ddx56Q9D0R4 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
Ddx56Q9D0R4 Gm2108-201ENSMUST00000165058 2177 ntBASIC7.64□□□□□ -1.19
Ddx56Q9D0R4 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ddx56Q9D0R4 Tlr1-202ENSMUST00000197315 3025 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ddx56Q9D0R4 Calcrl-201ENSMUST00000074262 4882 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ddx56Q9D0R4 Glb1l2-201ENSMUST00000040398 3701 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
Ddx56Q9D0R4 Gm28651-202ENSMUST00000227968 2693 ntBASIC7.64□□□□□ -1.19
Ddx56Q9D0R4 Vmn2r-ps159-202ENSMUST00000096792 2574 ntBASIC7.64□□□□□ -1.19
Ddx56Q9D0R4 4931403G20Rik-201ENSMUST00000180861 1699 ntTSL 5 BASIC7.63□□□□□ -1.19
Ddx56Q9D0R4 Gm29670-201ENSMUST00000190228 2491 ntBASIC7.63□□□□□ -1.19
Ddx56Q9D0R4 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
Ddx56Q9D0R4 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ddx56Q9D0R4 Gm37460-201ENSMUST00000191796 2249 ntBASIC7.63□□□□□ -1.19
Ddx56Q9D0R4 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Ddx56Q9D0R4 Vmn1r12-202ENSMUST00000226866 6639 ntAPPRIS P2 BASIC7.63□□□□□ -1.19
Ddx56Q9D0R4 Gm8212-201ENSMUST00000166350 1404 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Ddx56Q9D0R4 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ddx56Q9D0R4 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ddx56Q9D0R4 Peak1-204ENSMUST00000188142 7524 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ddx56Q9D0R4 Myo6-205ENSMUST00000127779 4067 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Ddx56Q9D0R4 Zim3-202ENSMUST00000203365 3226 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Ddx56Q9D0R4 Mrgprx2-202ENSMUST00000186394 1930 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Ddx56Q9D0R4 Cpa6-201ENSMUST00000035577 1932 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ddx56Q9D0R4 Gm13525-201ENSMUST00000120607 478 ntBASIC7.63□□□□□ -1.19
Ddx56Q9D0R4 Gm22024-201ENSMUST00000122733 287 ntBASIC7.63□□□□□ -1.19
Ddx56Q9D0R4 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC7.63□□□□□ -1.19
Ddx56Q9D0R4 Gm5970-201ENSMUST00000131638 1216 ntBASIC7.63□□□□□ -1.19
Ddx56Q9D0R4 Gm15534-201ENSMUST00000137642 562 ntBASIC7.63□□□□□ -1.19
Ddx56Q9D0R4 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Ddx56Q9D0R4 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Ddx56Q9D0R4 Gm24647-201ENSMUST00000157112 113 ntBASIC7.63□□□□□ -1.19
Ddx56Q9D0R4 Clec2i-204ENSMUST00000160867 933 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ddx56Q9D0R4 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC7.63□□□□□ -1.19
Ddx56Q9D0R4 Clec2i-205ENSMUST00000162666 1091 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ddx56Q9D0R4 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
Ddx56Q9D0R4 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC7.63□□□□□ -1.19
Ddx56Q9D0R4 C430002N11Rik-202ENSMUST00000189067 1029 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Ddx56Q9D0R4 Gm37977-201ENSMUST00000193096 721 ntBASIC7.63□□□□□ -1.19
Ddx56Q9D0R4 Gm42932-201ENSMUST00000197280 744 ntBASIC7.63□□□□□ -1.19
Ddx56Q9D0R4 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC7.63□□□□□ -1.19
Ddx56Q9D0R4 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
Ddx56Q9D0R4 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Ddx56Q9D0R4 AC118006.3-201ENSMUST00000223948 1176 ntBASIC7.63□□□□□ -1.19
Ddx56Q9D0R4 AC154487.1-201ENSMUST00000224649 226 ntBASIC7.63□□□□□ -1.19
Ddx56Q9D0R4 AC154838.3-201ENSMUST00000228876 965 ntBASIC7.63□□□□□ -1.19
Ddx56Q9D0R4 Clec2i-201ENSMUST00000032519 1014 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ddx56Q9D0R4 Olfr1322-201ENSMUST00000070304 933 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Ddx56Q9D0R4 Olfr384-201ENSMUST00000072993 939 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Ddx56Q9D0R4 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Ddx56Q9D0R4 Gm13769-201ENSMUST00000077123 930 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Ddx56Q9D0R4 Olfr1242-201ENSMUST00000099777 1053 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Ddx56Q9D0R4 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC7.63□□□□□ -1.19
Ddx56Q9D0R4 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Ddx56Q9D0R4 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ddx56Q9D0R4 Vmn1r90-203ENSMUST00000226510 6674 ntAPPRIS ALT2 BASIC7.63□□□□□ -1.19
Ddx56Q9D0R4 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC7.63□□□□□ -1.19
Ddx56Q9D0R4 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Ddx56Q9D0R4 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
Ddx56Q9D0R4 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
Ddx56Q9D0R4 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
Ddx56Q9D0R4 AC159264.1-201ENSMUST00000224844 4257 ntBASIC7.63□□□□□ -1.19
Ddx56Q9D0R4 Gm45512-201ENSMUST00000210432 1553 ntBASIC7.63□□□□□ -1.19
Ddx56Q9D0R4 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ddx56Q9D0R4 Gm44130-201ENSMUST00000205157 3004 ntBASIC7.62□□□□□ -1.19
Ddx56Q9D0R4 Gm44021-201ENSMUST00000203055 3516 ntBASIC7.62□□□□□ -1.19
Ddx56Q9D0R4 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Ddx56Q9D0R4 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Ddx56Q9D0R4 Gm9030-201ENSMUST00000218405 2410 ntBASIC7.62□□□□□ -1.19
Ddx56Q9D0R4 Gm9029-201ENSMUST00000219232 2410 ntBASIC7.62□□□□□ -1.19
Ddx56Q9D0R4 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Ddx56Q9D0R4 Gm37161-201ENSMUST00000191994 2697 ntBASIC7.62□□□□□ -1.19
Ddx56Q9D0R4 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Ddx56Q9D0R4 Gm44898-201ENSMUST00000205934 2223 ntBASIC7.62□□□□□ -1.19
Ddx56Q9D0R4 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ddx56Q9D0R4 Gm21152-201ENSMUST00000190271 3483 ntBASIC7.62□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms