Protein–RNA interactions for Protein: Q9D024

Ccdc47, Coiled-coil domain-containing protein 47, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47Q9D024 Gm8168-201ENSMUST00000209631 948 ntBASIC8.23□□□□□ -1.09
Ccdc47Q9D024 AC122428.4-201ENSMUST00000213494 589 ntTSL 3 BASIC8.23□□□□□ -1.09
Ccdc47Q9D024 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC8.23□□□□□ -1.09
Ccdc47Q9D024 Olfr602-ps1-202ENSMUST00000218213 1169 ntTSL 5 BASIC8.23□□□□□ -1.09
Ccdc47Q9D024 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc47Q9D024 Gm30239-201ENSMUST00000220776 780 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc47Q9D024 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc47Q9D024 Smim15-203ENSMUST00000224361 830 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Ccdc47Q9D024 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc47Q9D024 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc47Q9D024 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Ccdc47Q9D024 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Ccdc47Q9D024 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc47Q9D024 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
Ccdc47Q9D024 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc47Q9D024 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc47Q9D024 Slfn10-ps-202ENSMUST00000152760 2673 ntBASIC8.23□□□□□ -1.09
Ccdc47Q9D024 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc47Q9D024 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc47Q9D024 Olfr691-202ENSMUST00000213290 2327 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Ccdc47Q9D024 Slc7a11-201ENSMUST00000029297 9223 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc47Q9D024 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc47Q9D024 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc47Q9D024 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc47Q9D024 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Ccdc47Q9D024 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc47Q9D024 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc47Q9D024 Gm37138-201ENSMUST00000194564 2089 ntBASIC8.22□□□□□ -1.09
Ccdc47Q9D024 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC8.22□□□□□ -1.09
Ccdc47Q9D024 Nr1h5-203ENSMUST00000196983 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc47Q9D024 CT009757.6-201ENSMUST00000220661 2312 ntBASIC8.22□□□□□ -1.09
Ccdc47Q9D024 Il12a-202ENSMUST00000107816 1268 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc47Q9D024 Ggact-202ENSMUST00000110679 686 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc47Q9D024 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc47Q9D024 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc47Q9D024 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC8.22□□□□□ -1.09
Ccdc47Q9D024 Gm18848-201ENSMUST00000182069 792 ntBASIC8.22□□□□□ -1.09
Ccdc47Q9D024 0610031O16Rik-204ENSMUST00000185122 825 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc47Q9D024 Gm28195-201ENSMUST00000186992 372 ntBASIC8.22□□□□□ -1.09
Ccdc47Q9D024 Gm28087-201ENSMUST00000189195 767 ntTSL 5 BASIC8.22□□□□□ -1.09
Ccdc47Q9D024 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC8.22□□□□□ -1.09
Ccdc47Q9D024 Gm42804-201ENSMUST00000199701 178 ntBASIC8.22□□□□□ -1.09
Ccdc47Q9D024 0610006L08Rik-202ENSMUST00000206672 803 ntTSL 3 BASIC8.22□□□□□ -1.09
Ccdc47Q9D024 Gm45045-201ENSMUST00000207368 218 ntTSL 5 BASIC8.22□□□□□ -1.09
Ccdc47Q9D024 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC8.22□□□□□ -1.09
Ccdc47Q9D024 Gm46424-201ENSMUST00000221567 168 ntBASIC8.22□□□□□ -1.09
Ccdc47Q9D024 Gm10126-201ENSMUST00000221732 168 ntBASIC8.22□□□□□ -1.09
Ccdc47Q9D024 AC163660.1-201ENSMUST00000223696 818 ntBASIC8.22□□□□□ -1.09
Ccdc47Q9D024 Tmem267-201ENSMUST00000099147 910 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Ccdc47Q9D024 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC8.22□□□□□ -1.09
Ccdc47Q9D024 Lin54-204ENSMUST00000137750 4056 ntTSL 5 BASIC8.22□□□□□ -1.09
Ccdc47Q9D024 AC122769.1-201ENSMUST00000226930 1714 ntBASIC8.22□□□□□ -1.09
Ccdc47Q9D024 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc47Q9D024 Olfr615-203ENSMUST00000215673 3469 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Ccdc47Q9D024 AC163660.4-201ENSMUST00000224983 2171 ntBASIC8.22□□□□□ -1.09
Ccdc47Q9D024 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc47Q9D024 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc47Q9D024 Chil4-201ENSMUST00000082219 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc47Q9D024 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc47Q9D024 Zfp976-201ENSMUST00000098503 1976 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
Ccdc47Q9D024 Gm43395-201ENSMUST00000198717 2240 ntBASIC8.22□□□□□ -1.09
Ccdc47Q9D024 Gm10693-201ENSMUST00000144146 2037 ntBASIC8.22□□□□□ -1.09
Ccdc47Q9D024 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc47Q9D024 Gm10388-201ENSMUST00000205001 2936 ntBASIC8.22□□□□□ -1.09
Ccdc47Q9D024 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc47Q9D024 Anks1b-201ENSMUST00000099364 1383 ntTSL 5 BASIC8.22□□□□□ -1.09
Ccdc47Q9D024 Tor1aip2-202ENSMUST00000065648 2529 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc47Q9D024 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc47Q9D024 Gm45073-201ENSMUST00000207688 4247 ntBASIC8.21□□□□□ -1.09
Ccdc47Q9D024 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
Ccdc47Q9D024 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC8.21□□□□□ -1.09
Ccdc47Q9D024 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Ccdc47Q9D024 Luzp1-201ENSMUST00000001116 7246 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Ccdc47Q9D024 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
Ccdc47Q9D024 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC8.21□□□□□ -1.09
Ccdc47Q9D024 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
Ccdc47Q9D024 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC8.21□□□□□ -1.09
Ccdc47Q9D024 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Ccdc47Q9D024 Gm14762-201ENSMUST00000105109 1771 ntBASIC8.21□□□□□ -1.1
Ccdc47Q9D024 Trdv2-2-201ENSMUST00000103678 397 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Ccdc47Q9D024 Gm25311-201ENSMUST00000104136 132 ntBASIC8.21□□□□□ -1.1
Ccdc47Q9D024 Gm25631-201ENSMUST00000104390 130 ntBASIC8.21□□□□□ -1.1
Ccdc47Q9D024 Gm25498-201ENSMUST00000104424 129 ntBASIC8.21□□□□□ -1.1
Ccdc47Q9D024 Atp5h-203ENSMUST00000106537 682 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Ccdc47Q9D024 Gm15105-201ENSMUST00000117777 204 ntBASIC8.21□□□□□ -1.1
Ccdc47Q9D024 Gm26480-201ENSMUST00000122619 297 ntBASIC8.21□□□□□ -1.1
Ccdc47Q9D024 Stau2-209ENSMUST00000145092 564 ntTSL 5 BASIC8.21□□□□□ -1.1
Ccdc47Q9D024 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC8.21□□□□□ -1.1
Ccdc47Q9D024 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC8.21□□□□□ -1.1
Ccdc47Q9D024 n-R5s93-201ENSMUST00000180091 119 ntBASIC8.21□□□□□ -1.1
Ccdc47Q9D024 Gm17786-201ENSMUST00000182000 427 ntBASIC8.21□□□□□ -1.1
Ccdc47Q9D024 Gm27026-201ENSMUST00000183003 892 ntBASIC8.21□□□□□ -1.1
Ccdc47Q9D024 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC8.21□□□□□ -1.1
Ccdc47Q9D024 Trbv9-201ENSMUST00000194494 290 ntBASIC8.21□□□□□ -1.1
Ccdc47Q9D024 Gm38328-201ENSMUST00000195582 317 ntBASIC8.21□□□□□ -1.1
Ccdc47Q9D024 Gm30517-201ENSMUST00000197350 772 ntBASIC8.21□□□□□ -1.1
Ccdc47Q9D024 Gm42752-201ENSMUST00000198394 1106 ntBASIC8.21□□□□□ -1.1
Ccdc47Q9D024 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC8.21□□□□□ -1.1
Ccdc47Q9D024 Gm44983-201ENSMUST00000208121 463 ntTSL 3 BASIC8.21□□□□□ -1.1
Ccdc47Q9D024 Gm45100-201ENSMUST00000209153 391 ntBASIC8.21□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms