Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Rpl31-206ENSMUST00000195123 356 ntTSL 3 BASIC7.91□□□□□ -1.14
Smc1aQ9CU62 D13Ertd608e-202ENSMUST00000195797 704 ntAPPRIS P5 TSL 1 (best) BASIC7.91□□□□□ -1.14
Smc1aQ9CU62 Gm43357-201ENSMUST00000197132 342 ntTSL 3 BASIC7.91□□□□□ -1.14
Smc1aQ9CU62 Gm43346-201ENSMUST00000198290 685 ntTSL 2 BASIC7.91□□□□□ -1.14
Smc1aQ9CU62 Gm18593-201ENSMUST00000200754 1139 ntBASIC7.91□□□□□ -1.14
Smc1aQ9CU62 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC7.91□□□□□ -1.14
Smc1aQ9CU62 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC7.91□□□□□ -1.14
Smc1aQ9CU62 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC7.91□□□□□ -1.14
Smc1aQ9CU62 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC7.91□□□□□ -1.14
Smc1aQ9CU62 Gm8275-201ENSMUST00000219732 424 ntBASIC7.91□□□□□ -1.14
Smc1aQ9CU62 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC7.91□□□□□ -1.14
Smc1aQ9CU62 Olfr535-201ENSMUST00000074897 991 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Smc1aQ9CU62 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC7.91□□□□□ -1.14
Smc1aQ9CU62 Rpl31-ps9-201ENSMUST00000086596 378 ntBASIC7.91□□□□□ -1.14
Smc1aQ9CU62 Wfdc13-201ENSMUST00000088260 1074 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Smc1aQ9CU62 1700080N15Rik-202ENSMUST00000154360 1316 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Smc1aQ9CU62 AC125487.2-201ENSMUST00000219810 1300 ntBASIC7.91□□□□□ -1.14
Smc1aQ9CU62 Gm11342-203ENSMUST00000224879 1324 ntBASIC7.91□□□□□ -1.14
Smc1aQ9CU62 Il18bp-201ENSMUST00000094134 1311 ntAPPRIS P2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Smc1aQ9CU62 Pramef20-201ENSMUST00000121109 1434 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
Smc1aQ9CU62 Gm44863-201ENSMUST00000207613 1422 ntBASIC7.91□□□□□ -1.14
Smc1aQ9CU62 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Smc1aQ9CU62 Gm10259-201ENSMUST00000091289 1590 ntBASIC7.91□□□□□ -1.14
Smc1aQ9CU62 AC120347.1-201ENSMUST00000223326 1639 ntBASIC7.91□□□□□ -1.14
Smc1aQ9CU62 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
Smc1aQ9CU62 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC7.91□□□□□ -1.14
Smc1aQ9CU62 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Smc1aQ9CU62 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Smc1aQ9CU62 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Smc1aQ9CU62 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
Smc1aQ9CU62 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC7.9□□□□□ -1.14
Smc1aQ9CU62 Ank3-215ENSMUST00000182269 4411 ntTSL 5 BASIC7.9□□□□□ -1.14
Smc1aQ9CU62 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
Smc1aQ9CU62 Gm7265-201ENSMUST00000192735 3502 ntBASIC7.9□□□□□ -1.14
Smc1aQ9CU62 Ube4a-204ENSMUST00000138559 3374 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Smc1aQ9CU62 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Smc1aQ9CU62 Gm43483-201ENSMUST00000196724 2860 ntBASIC7.9□□□□□ -1.14
Smc1aQ9CU62 Gm42653-201ENSMUST00000200644 2839 ntBASIC7.9□□□□□ -1.14
Smc1aQ9CU62 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.14
Smc1aQ9CU62 Gm31181-201ENSMUST00000217731 2283 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Smc1aQ9CU62 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Smc1aQ9CU62 CT025675.1-201ENSMUST00000228171 1567 ntBASIC7.9□□□□□ -1.14
Smc1aQ9CU62 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Smc1aQ9CU62 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Smc1aQ9CU62 C230079O03Rik-201ENSMUST00000209560 1385 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Smc1aQ9CU62 Sult2a7-201ENSMUST00000108524 897 ntAPPRIS P2 TSL 5 BASIC7.9□□□□□ -1.14
Smc1aQ9CU62 H3f3a-ps1-201ENSMUST00000119546 410 ntBASIC7.9□□□□□ -1.14
Smc1aQ9CU62 Gm11895-201ENSMUST00000122165 467 ntBASIC7.9□□□□□ -1.14
Smc1aQ9CU62 Gm10130-201ENSMUST00000133235 303 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
Smc1aQ9CU62 BC016548-201ENSMUST00000144657 640 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Smc1aQ9CU62 Gm15392-201ENSMUST00000152863 778 ntTSL 3 BASIC7.9□□□□□ -1.14
Smc1aQ9CU62 Gm42421-201ENSMUST00000172367 719 ntAPPRIS P1 TSL 3 BASIC7.9□□□□□ -1.14
Smc1aQ9CU62 Gm22642-201ENSMUST00000175352 252 ntBASIC7.9□□□□□ -1.14
Smc1aQ9CU62 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC7.9□□□□□ -1.14
Smc1aQ9CU62 Gm9423-201ENSMUST00000183173 997 ntBASIC7.9□□□□□ -1.14
Smc1aQ9CU62 Gm27684-201ENSMUST00000183778 80 ntBASIC7.9□□□□□ -1.14
Smc1aQ9CU62 Gm38102-202ENSMUST00000196428 174 ntTSL 5 BASIC7.9□□□□□ -1.14
Smc1aQ9CU62 Gm43396-201ENSMUST00000197506 706 ntBASIC7.9□□□□□ -1.14
Smc1aQ9CU62 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC7.9□□□□□ -1.14
Smc1aQ9CU62 Gm4972-201ENSMUST00000211108 1254 ntBASIC7.9□□□□□ -1.14
Smc1aQ9CU62 Sult2a7-204ENSMUST00000211740 942 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
Smc1aQ9CU62 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Smc1aQ9CU62 Gm18112-201ENSMUST00000219862 1195 ntBASIC7.9□□□□□ -1.14
Smc1aQ9CU62 Gm21731-202ENSMUST00000223770 886 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
Smc1aQ9CU62 AC159188.3-201ENSMUST00000224199 880 ntBASIC7.9□□□□□ -1.14
Smc1aQ9CU62 Gm21762-202ENSMUST00000225881 830 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
Smc1aQ9CU62 AC126549.1-201ENSMUST00000225044 3687 ntBASIC7.9□□□□□ -1.14
Smc1aQ9CU62 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Smc1aQ9CU62 Gm43775-201ENSMUST00000201019 3395 ntBASIC7.9□□□□□ -1.14
Smc1aQ9CU62 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
Smc1aQ9CU62 Usp40-204ENSMUST00000187758 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.15
Smc1aQ9CU62 2610203C20Rik-204ENSMUST00000181214 3525 ntTSL 5 BASIC7.9□□□□□ -1.15
Smc1aQ9CU62 Gm29761-201ENSMUST00000215964 1939 ntBASIC7.9□□□□□ -1.15
Smc1aQ9CU62 AC093022.3-201ENSMUST00000226569 1926 ntBASIC7.9□□□□□ -1.15
Smc1aQ9CU62 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC7.9□□□□□ -1.15
Smc1aQ9CU62 Olfr43-204ENSMUST00000215550 1854 ntAPPRIS P1 TSL 3 BASIC7.89□□□□□ -1.15
Smc1aQ9CU62 Pik3c2g-212ENSMUST00000190962 1774 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Smc1aQ9CU62 Gm42874-201ENSMUST00000198888 1774 ntBASIC7.89□□□□□ -1.15
Smc1aQ9CU62 Olfr740-202ENSMUST00000214792 4103 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Smc1aQ9CU62 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Smc1aQ9CU62 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Smc1aQ9CU62 Prelp-201ENSMUST00000048432 3615 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Smc1aQ9CU62 Gm37863-201ENSMUST00000194911 1457 ntBASIC7.89□□□□□ -1.15
Smc1aQ9CU62 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Smc1aQ9CU62 Tatdn1-201ENSMUST00000110155 1364 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Smc1aQ9CU62 Trav6-2-201ENSMUST00000103573 338 ntAPPRIS ALT2 BASIC7.89□□□□□ -1.15
Smc1aQ9CU62 Gm25760-201ENSMUST00000103989 132 ntBASIC7.89□□□□□ -1.15
Smc1aQ9CU62 Gm23437-201ENSMUST00000104036 127 ntBASIC7.89□□□□□ -1.15
Smc1aQ9CU62 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Smc1aQ9CU62 Gm15081-201ENSMUST00000119794 844 ntBASIC7.89□□□□□ -1.15
Smc1aQ9CU62 Gm15096-201ENSMUST00000121918 878 ntBASIC7.89□□□□□ -1.15
Smc1aQ9CU62 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC7.89□□□□□ -1.15
Smc1aQ9CU62 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC7.89□□□□□ -1.15
Smc1aQ9CU62 Gm12236-201ENSMUST00000152968 250 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Smc1aQ9CU62 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC7.89□□□□□ -1.15
Smc1aQ9CU62 Gm23007-201ENSMUST00000158951 177 ntBASIC7.89□□□□□ -1.15
Smc1aQ9CU62 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Smc1aQ9CU62 Gm8206-203ENSMUST00000171428 997 ntTSL 5 BASIC7.89□□□□□ -1.15
Smc1aQ9CU62 Gm3500-202ENSMUST00000178058 609 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Smc1aQ9CU62 Rps12-ps22-201ENSMUST00000179382 402 ntBASIC7.89□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms