Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Mir8094-201ENSMUST00000183361 117 ntBASIC8.2□□□□□ -1.1
Clp1Q99LI9 Gm20954-201ENSMUST00000189078 644 ntBASIC8.2□□□□□ -1.1
Clp1Q99LI9 Lax1-202ENSMUST00000189524 628 ntTSL 2 BASIC8.2□□□□□ -1.1
Clp1Q99LI9 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Clp1Q99LI9 Ly6g-202ENSMUST00000190262 941 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Clp1Q99LI9 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Clp1Q99LI9 Gm38030-201ENSMUST00000192376 475 ntBASIC8.2□□□□□ -1.1
Clp1Q99LI9 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC8.2□□□□□ -1.1
Clp1Q99LI9 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC8.2□□□□□ -1.1
Clp1Q99LI9 Gm5288-201ENSMUST00000198323 1119 ntBASIC8.2□□□□□ -1.1
Clp1Q99LI9 Gm42760-201ENSMUST00000199814 311 ntBASIC8.2□□□□□ -1.1
Clp1Q99LI9 Gm34333-201ENSMUST00000200363 669 ntTSL 3 BASIC8.2□□□□□ -1.1
Clp1Q99LI9 Gm2762-203ENSMUST00000201658 1234 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Clp1Q99LI9 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC8.2□□□□□ -1.1
Clp1Q99LI9 Gm45045-201ENSMUST00000207368 218 ntTSL 5 BASIC8.2□□□□□ -1.1
Clp1Q99LI9 Gm33242-201ENSMUST00000212130 1057 ntBASIC8.2□□□□□ -1.1
Clp1Q99LI9 Gm18112-201ENSMUST00000219862 1195 ntBASIC8.2□□□□□ -1.1
Clp1Q99LI9 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC8.2□□□□□ -1.1
Clp1Q99LI9 4932702P03Rik-203ENSMUST00000225028 670 ntBASIC8.2□□□□□ -1.1
Clp1Q99LI9 CT009527.2-201ENSMUST00000225386 606 ntBASIC8.2□□□□□ -1.1
Clp1Q99LI9 AC164883.2-201ENSMUST00000227931 3815 ntBASIC8.2□□□□□ -1.1
Clp1Q99LI9 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Clp1Q99LI9 Mapk9-202ENSMUST00000043321 1297 ntAPPRIS ALT1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Clp1Q99LI9 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Clp1Q99LI9 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Clp1Q99LI9 Olfr1170-201ENSMUST00000099831 951 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Clp1Q99LI9 Pot1a-209ENSMUST00000166445 1923 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Clp1Q99LI9 Ehbp1-201ENSMUST00000045167 4821 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
Clp1Q99LI9 Ncor1-201ENSMUST00000018645 9037 ntAPPRIS P2 TSL 5 BASIC8.2□□□□□ -1.1
Clp1Q99LI9 Fto-202ENSMUST00000125471 3887 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Clp1Q99LI9 Phc3-210ENSMUST00000177992 2920 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Clp1Q99LI9 Setd5-203ENSMUST00000113157 6527 ntTSL 5 BASIC8.2□□□□□ -1.1
Clp1Q99LI9 Zbtb44-202ENSMUST00000167346 1308 ntTSL 3 BASIC8.2□□□□□ -1.1
Clp1Q99LI9 Pik3ca-203ENSMUST00000108243 6689 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Clp1Q99LI9 Gm43775-201ENSMUST00000201019 3395 ntBASIC8.2□□□□□ -1.1
Clp1Q99LI9 Olfr655-204ENSMUST00000216750 2010 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Clp1Q99LI9 Sycp1-202ENSMUST00000196988 3189 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Clp1Q99LI9 2010310C07Rik-201ENSMUST00000187172 2226 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Clp1Q99LI9 Ppp1r9a-204ENSMUST00000168998 2966 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Clp1Q99LI9 Ssr1-201ENSMUST00000021864 9333 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Clp1Q99LI9 4921509C19Rik-201ENSMUST00000080132 2684 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Clp1Q99LI9 Olfr1510-202ENSMUST00000215928 1934 ntAPPRIS P1 TSL 3 BASIC8.19□□□□□ -1.1
Clp1Q99LI9 Gm35572-201ENSMUST00000212427 2310 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Clp1Q99LI9 AC131743.4-201ENSMUST00000221638 1553 ntBASIC8.19□□□□□ -1.1
Clp1Q99LI9 Patj-206ENSMUST00000107033 3624 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Clp1Q99LI9 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Clp1Q99LI9 AC093043.2-201ENSMUST00000228616 2017 ntBASIC8.19□□□□□ -1.1
Clp1Q99LI9 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Clp1Q99LI9 Gm37959-201ENSMUST00000191700 2897 ntBASIC8.19□□□□□ -1.1
Clp1Q99LI9 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Clp1Q99LI9 Fancl-202ENSMUST00000109509 1187 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Clp1Q99LI9 Gm11105-201ENSMUST00000112781 478 ntBASIC8.19□□□□□ -1.1
Clp1Q99LI9 Rps25-ps1-201ENSMUST00000119876 378 ntBASIC8.19□□□□□ -1.1
Clp1Q99LI9 Olfr1081-ps1-201ENSMUST00000120210 945 ntBASIC8.19□□□□□ -1.1
Clp1Q99LI9 Gm14531-201ENSMUST00000120845 285 ntBASIC8.19□□□□□ -1.1
Clp1Q99LI9 Gm11309-201ENSMUST00000127108 613 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Clp1Q99LI9 Gm15265-202ENSMUST00000143287 814 ntTSL 3 BASIC8.19□□□□□ -1.1
Clp1Q99LI9 E130111B04Rik-201ENSMUST00000156781 450 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Clp1Q99LI9 Gm6264-201ENSMUST00000160802 624 ntBASIC8.19□□□□□ -1.1
Clp1Q99LI9 Gm4340-201ENSMUST00000163113 807 ntAPPRIS ALT2 BASIC8.19□□□□□ -1.1
Clp1Q99LI9 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Clp1Q99LI9 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Clp1Q99LI9 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Clp1Q99LI9 Vmn1r113-201ENSMUST00000168794 894 ntTSL 5 BASIC8.19□□□□□ -1.1
Clp1Q99LI9 Gm21772-201ENSMUST00000169213 478 ntBASIC8.19□□□□□ -1.1
Clp1Q99LI9 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Clp1Q99LI9 Gm17126-201ENSMUST00000172276 523 ntBASIC8.19□□□□□ -1.1
Clp1Q99LI9 Gm16451-201ENSMUST00000173484 924 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Clp1Q99LI9 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Clp1Q99LI9 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC8.19□□□□□ -1.1
Clp1Q99LI9 Gm28512-201ENSMUST00000187415 762 ntTSL 3 BASIC8.19□□□□□ -1.1
Clp1Q99LI9 Gm38334-201ENSMUST00000195060 313 ntBASIC8.19□□□□□ -1.1
Clp1Q99LI9 Gm42424-201ENSMUST00000198319 376 ntBASIC8.19□□□□□ -1.1
Clp1Q99LI9 Gm43093-201ENSMUST00000202439 1213 ntBASIC8.19□□□□□ -1.1
Clp1Q99LI9 Olfr1357-203ENSMUST00000205085 1012 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Clp1Q99LI9 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC8.19□□□□□ -1.1
Clp1Q99LI9 Gm4668-201ENSMUST00000214742 943 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Clp1Q99LI9 Gm31763-203ENSMUST00000219739 1025 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Clp1Q99LI9 Rps27rt-201ENSMUST00000053150 374 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Clp1Q99LI9 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Clp1Q99LI9 Desi2-202ENSMUST00000069568 1193 ntBASIC8.19□□□□□ -1.1
Clp1Q99LI9 Gm16442-201ENSMUST00000079099 924 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Clp1Q99LI9 Myo1f-201ENSMUST00000087605 3819 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Clp1Q99LI9 Gm42874-201ENSMUST00000198888 1774 ntBASIC8.19□□□□□ -1.1
Clp1Q99LI9 Gm37460-201ENSMUST00000191796 2249 ntBASIC8.19□□□□□ -1.1
Clp1Q99LI9 Sncaip-202ENSMUST00000115410 3585 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Clp1Q99LI9 Gm16487-201ENSMUST00000105048 4037 ntBASIC8.19□□□□□ -1.1
Clp1Q99LI9 Gm10822-201ENSMUST00000181596 2320 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Clp1Q99LI9 Vrk1-203ENSMUST00000085026 3711 ntAPPRIS P4 TSL 1 (best) BASIC8.19□□□□□ -1.1
Clp1Q99LI9 Zc3h12c-201ENSMUST00000165519 6133 ntAPPRIS P2 TSL 5 BASIC8.19□□□□□ -1.1
Clp1Q99LI9 Gm44001-201ENSMUST00000203158 3773 ntBASIC8.19□□□□□ -1.1
Clp1Q99LI9 Map3k20-204ENSMUST00000135469 6663 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Clp1Q99LI9 Nbr1-207ENSMUST00000107218 3353 ntAPPRIS P3 TSL 5 BASIC8.19□□□□□ -1.1
Clp1Q99LI9 Zfp800-201ENSMUST00000035930 3881 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Clp1Q99LI9 Unc5c-201ENSMUST00000075282 3890 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Clp1Q99LI9 AC124572.1-201ENSMUST00000218155 2406 ntBASIC8.19□□□□□ -1.1
Clp1Q99LI9 Aoah-201ENSMUST00000021757 2921 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Clp1Q99LI9 Tacc2-202ENSMUST00000059145 3906 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Clp1Q99LI9 Mlh3-201ENSMUST00000019378 5463 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Clp1Q99LI9 Olfr1199-203ENSMUST00000131038 2557 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms