Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Gm16443-201ENSMUST00000207909 2184 ntBASIC9.13□□□□□ -0.95
RtcbQ99LF4 Pnisr-201ENSMUST00000029911 4545 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
RtcbQ99LF4 Lsamp-202ENSMUST00000099761 8794 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
RtcbQ99LF4 Tas1r3-201ENSMUST00000030949 3523 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
RtcbQ99LF4 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC9.13□□□□□ -0.95
RtcbQ99LF4 Gm43839-201ENSMUST00000196183 2325 ntBASIC9.13□□□□□ -0.95
RtcbQ99LF4 4933421A08Rik-201ENSMUST00000135313 1638 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
RtcbQ99LF4 AI182371-207ENSMUST00000226972 1642 ntAPPRIS ALT2 BASIC9.13□□□□□ -0.95
RtcbQ99LF4 Slc1a3-201ENSMUST00000005493 4163 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
RtcbQ99LF4 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
RtcbQ99LF4 Tmc2-201ENSMUST00000077988 3216 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
RtcbQ99LF4 Tnik-203ENSMUST00000159680 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
RtcbQ99LF4 A430072C10Rik-201ENSMUST00000197848 2532 ntBASIC9.12□□□□□ -0.95
RtcbQ99LF4 Supt7l-204ENSMUST00000201769 2548 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
RtcbQ99LF4 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
RtcbQ99LF4 Phxr4-202ENSMUST00000216590 1391 ntBASIC9.12□□□□□ -0.95
RtcbQ99LF4 Zfp661-203ENSMUST00000110368 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
RtcbQ99LF4 Eps15-204ENSMUST00000132165 2295 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
RtcbQ99LF4 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
RtcbQ99LF4 Fmo4-202ENSMUST00000111525 2683 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
RtcbQ99LF4 Ampd3-208ENSMUST00000213373 3337 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
RtcbQ99LF4 Oas1e-203ENSMUST00000201172 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
RtcbQ99LF4 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
RtcbQ99LF4 Gm37080-201ENSMUST00000194804 2404 ntBASIC9.12□□□□□ -0.95
RtcbQ99LF4 Sept11-203ENSMUST00000201421 2428 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
RtcbQ99LF4 Slu7-201ENSMUST00000020681 3625 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
RtcbQ99LF4 Cfap44-202ENSMUST00000120049 6199 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
RtcbQ99LF4 Gm23768-201ENSMUST00000104440 131 ntBASIC9.12□□□□□ -0.95
RtcbQ99LF4 Bdnf-208ENSMUST00000111049 3830 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
RtcbQ99LF4 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC9.12□□□□□ -0.95
RtcbQ99LF4 Gm11796-201ENSMUST00000120208 972 ntBASIC9.12□□□□□ -0.95
RtcbQ99LF4 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
RtcbQ99LF4 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
RtcbQ99LF4 Gm24545-201ENSMUST00000158651 85 ntBASIC9.12□□□□□ -0.95
RtcbQ99LF4 Gm5611-201ENSMUST00000164523 852 ntBASIC9.12□□□□□ -0.95
RtcbQ99LF4 Gm3326-201ENSMUST00000164656 1043 ntBASIC9.12□□□□□ -0.95
RtcbQ99LF4 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
RtcbQ99LF4 Gm17212-201ENSMUST00000166666 259 ntBASIC9.12□□□□□ -0.95
RtcbQ99LF4 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
RtcbQ99LF4 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
RtcbQ99LF4 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC9.12□□□□□ -0.95
RtcbQ99LF4 Gm21614-201ENSMUST00000183260 1005 ntBASIC9.12□□□□□ -0.95
RtcbQ99LF4 Mir6911-201ENSMUST00000184241 69 ntBASIC9.12□□□□□ -0.95
RtcbQ99LF4 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC9.12□□□□□ -0.95
RtcbQ99LF4 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC9.12□□□□□ -0.95
RtcbQ99LF4 AC055772.1-201ENSMUST00000222646 395 ntTSL 3 BASIC9.12□□□□□ -0.95
RtcbQ99LF4 AC154380.1-201ENSMUST00000226804 720 ntBASIC9.12□□□□□ -0.95
RtcbQ99LF4 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC9.12□□□□□ -0.95
RtcbQ99LF4 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
RtcbQ99LF4 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC9.12□□□□□ -0.95
RtcbQ99LF4 Dsc3-203ENSMUST00000225110 3123 ntAPPRIS P2 BASIC9.12□□□□□ -0.95
RtcbQ99LF4 Cdk6-202ENSMUST00000165117 11525 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
RtcbQ99LF4 Gpr35-201ENSMUST00000027489 3270 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
RtcbQ99LF4 AC166574.5-201ENSMUST00000227438 1432 ntBASIC9.12□□□□□ -0.95
RtcbQ99LF4 Cd163-202ENSMUST00000112541 4443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
RtcbQ99LF4 Slc12a1-203ENSMUST00000110495 4642 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
RtcbQ99LF4 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC9.11□□□□□ -0.95
RtcbQ99LF4 F10-202ENSMUST00000063820 2503 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
RtcbQ99LF4 Cep57l1-210ENSMUST00000190022 1949 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
RtcbQ99LF4 Gpr50-201ENSMUST00000070449 3069 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
RtcbQ99LF4 Ptgfr-202ENSMUST00000106126 1535 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
RtcbQ99LF4 Dlg2-203ENSMUST00000107193 4910 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
RtcbQ99LF4 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
RtcbQ99LF4 Gm37518-201ENSMUST00000194930 2603 ntBASIC9.11□□□□□ -0.95
RtcbQ99LF4 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
RtcbQ99LF4 Gm6150-202ENSMUST00000219888 2977 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
RtcbQ99LF4 Meis1-209ENSMUST00000185131 3346 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
RtcbQ99LF4 Gm22256-201ENSMUST00000102291 107 ntBASIC9.11□□□□□ -0.95
RtcbQ99LF4 Gm14891-201ENSMUST00000117378 596 ntBASIC9.11□□□□□ -0.95
RtcbQ99LF4 Gm14943-201ENSMUST00000118056 546 ntBASIC9.11□□□□□ -0.95
RtcbQ99LF4 Gm12401-201ENSMUST00000118435 228 ntBASIC9.11□□□□□ -0.95
RtcbQ99LF4 Gm14098-201ENSMUST00000119295 623 ntBASIC9.11□□□□□ -0.95
RtcbQ99LF4 Apc-ps1-201ENSMUST00000119356 470 ntBASIC9.11□□□□□ -0.95
RtcbQ99LF4 Gm15081-201ENSMUST00000119794 844 ntBASIC9.11□□□□□ -0.95
RtcbQ99LF4 Gm14587-201ENSMUST00000121714 658 ntBASIC9.11□□□□□ -0.95
RtcbQ99LF4 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC9.11□□□□□ -0.95
RtcbQ99LF4 Gm13669-201ENSMUST00000122366 457 ntBASIC9.11□□□□□ -0.95
RtcbQ99LF4 4930419G24Rik-201ENSMUST00000125494 1058 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
RtcbQ99LF4 Gm14092-201ENSMUST00000136794 617 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
RtcbQ99LF4 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
RtcbQ99LF4 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC9.11□□□□□ -0.95
RtcbQ99LF4 Gm18699-201ENSMUST00000190713 243 ntBASIC9.11□□□□□ -0.95
RtcbQ99LF4 Gm7804-202ENSMUST00000194187 854 ntBASIC9.11□□□□□ -0.95
RtcbQ99LF4 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC9.11□□□□□ -0.95
RtcbQ99LF4 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
RtcbQ99LF4 AC153847.1-201ENSMUST00000214524 353 ntBASIC9.11□□□□□ -0.95
RtcbQ99LF4 Olfr32-206ENSMUST00000215765 1241 ntAPPRIS P1 TSL 3 BASIC9.11□□□□□ -0.95
RtcbQ99LF4 Gm19073-201ENSMUST00000219978 555 ntBASIC9.11□□□□□ -0.95
RtcbQ99LF4 AC159622.1-201ENSMUST00000221004 554 ntBASIC9.11□□□□□ -0.95
RtcbQ99LF4 AV026068-219ENSMUST00000224148 933 ntBASIC9.11□□□□□ -0.95
RtcbQ99LF4 AC163667.1-201ENSMUST00000225201 1289 ntBASIC9.11□□□□□ -0.95
RtcbQ99LF4 AC154562.1-201ENSMUST00000226140 966 ntBASIC9.11□□□□□ -0.95
RtcbQ99LF4 CT009556.4-201ENSMUST00000227092 200 ntBASIC9.11□□□□□ -0.95
RtcbQ99LF4 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC9.11□□□□□ -0.95
RtcbQ99LF4 Olfr1386-201ENSMUST00000071905 1128 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
RtcbQ99LF4 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
RtcbQ99LF4 Olfr417-201ENSMUST00000085862 930 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
RtcbQ99LF4 Sprr2a3-201ENSMUST00000090872 682 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
RtcbQ99LF4 Gm10780-201ENSMUST00000099459 285 ntBASIC9.11□□□□□ -0.95
RtcbQ99LF4 Olfr201-201ENSMUST00000099656 927 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms