Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Gm29079-201ENSMUST00000188875 615 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm28213-201ENSMUST00000189183 615 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm29382-201ENSMUST00000189549 615 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm29377-205ENSMUST00000189603 615 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm28327-201ENSMUST00000189638 615 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm28790-201ENSMUST00000189642 615 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm28907-201ENSMUST00000189700 615 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm29586-207ENSMUST00000189745 615 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm29115-201ENSMUST00000189870 615 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm28366-201ENSMUST00000190147 615 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm29212-201ENSMUST00000190384 615 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm29533-201ENSMUST00000190403 615 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm28162-201ENSMUST00000190545 615 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm29030-201ENSMUST00000190848 615 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm28742-201ENSMUST00000191001 615 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm28899-201ENSMUST00000191161 615 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm29567-201ENSMUST00000191188 615 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm28222-201ENSMUST00000191210 615 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm28776-201ENSMUST00000191282 615 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm29306-201ENSMUST00000191366 615 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm29618-201ENSMUST00000191423 615 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm28136-210ENSMUST00000191432 615 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm29251-201ENSMUST00000191480 615 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm28658-201ENSMUST00000191532 615 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm32180-201ENSMUST00000192415 615 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm30598-201ENSMUST00000192620 615 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm37627-201ENSMUST00000194585 615 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm34274-201ENSMUST00000195825 615 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm38102-202ENSMUST00000196428 174 ntTSL 5 BASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm44252-201ENSMUST00000204187 330 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm44147-201ENSMUST00000204658 94 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm29154-205ENSMUST00000213325 1112 ntTSL 5 BASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm46311-201ENSMUST00000217971 203 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm6101-201ENSMUST00000195384 1867 ntBASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Gm32305-201ENSMUST00000221742 1899 ntTSL 5 BASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC8.82□□□□□ -1
Ccdc60Q8C4J0 1110002J07Rik-201ENSMUST00000181710 2229 ntTSL 5 BASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC8.82□□□□□ -1
Ccdc60Q8C4J0 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Olfr1160-202ENSMUST00000215457 6042 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC8.82□□□□□ -1
Ccdc60Q8C4J0 Camk2d-205ENSMUST00000106401 3059 ntTSL 5 BASIC8.82□□□□□ -1
Ccdc60Q8C4J0 AC159635.1-201ENSMUST00000220905 2102 ntBASIC8.81□□□□□ -1
Ccdc60Q8C4J0 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccdc60Q8C4J0 Phlpp2-201ENSMUST00000034175 7839 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccdc60Q8C4J0 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Ccdc60Q8C4J0 Hspg2-201ENSMUST00000030547 14187 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Ccdc60Q8C4J0 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccdc60Q8C4J0 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC8.81□□□□□ -1
Ccdc60Q8C4J0 Gm12468-201ENSMUST00000116189 404 ntBASIC8.81□□□□□ -1
Ccdc60Q8C4J0 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Ccdc60Q8C4J0 Gm14865-201ENSMUST00000117523 494 ntBASIC8.81□□□□□ -1
Ccdc60Q8C4J0 Gm12174-201ENSMUST00000119853 813 ntBASIC8.81□□□□□ -1
Ccdc60Q8C4J0 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC8.81□□□□□ -1
Ccdc60Q8C4J0 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC8.81□□□□□ -1
Ccdc60Q8C4J0 Gm14503-201ENSMUST00000130337 1164 ntBASIC8.81□□□□□ -1
Ccdc60Q8C4J0 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ccdc60Q8C4J0 Gml-202ENSMUST00000164026 895 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
Ccdc60Q8C4J0 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC8.81□□□□□ -1
Ccdc60Q8C4J0 Gm9167-201ENSMUST00000182469 962 ntBASIC8.81□□□□□ -1
Ccdc60Q8C4J0 Gm27360-201ENSMUST00000183487 80 ntBASIC8.81□□□□□ -1
Ccdc60Q8C4J0 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC8.81□□□□□ -1
Ccdc60Q8C4J0 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ccdc60Q8C4J0 Gm28340-201ENSMUST00000189218 202 ntTSL 3 BASIC8.81□□□□□ -1
Ccdc60Q8C4J0 Gm38204-201ENSMUST00000194835 619 ntTSL 2 BASIC8.81□□□□□ -1
Ccdc60Q8C4J0 Rpl31-206ENSMUST00000195123 356 ntTSL 3 BASIC8.81□□□□□ -1
Ccdc60Q8C4J0 Mark1-ps2-201ENSMUST00000197823 384 ntBASIC8.81□□□□□ -1
Ccdc60Q8C4J0 Igkv4-77-201ENSMUST00000199410 352 ntBASIC8.81□□□□□ -1
Ccdc60Q8C4J0 Gm9357-201ENSMUST00000207138 805 ntBASIC8.81□□□□□ -1
Ccdc60Q8C4J0 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC8.81□□□□□ -1
Ccdc60Q8C4J0 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC8.81□□□□□ -1
Ccdc60Q8C4J0 Prl7a2-201ENSMUST00000006660 1277 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccdc60Q8C4J0 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC8.81□□□□□ -1
Ccdc60Q8C4J0 Rpl31-ps9-201ENSMUST00000086596 378 ntBASIC8.81□□□□□ -1
Ccdc60Q8C4J0 Olfr716-201ENSMUST00000098137 1104 ntAPPRIS P1 BASIC8.81□□□□□ -1
Ccdc60Q8C4J0 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccdc60Q8C4J0 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ccdc60Q8C4J0 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC8.81□□□□□ -1
Ccdc60Q8C4J0 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC8.81□□□□□ -1
Ccdc60Q8C4J0 Meis2-205ENSMUST00000110907 3718 ntAPPRIS ALT1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccdc60Q8C4J0 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Ccdc60Q8C4J0 Zfp846-202ENSMUST00000115557 12974 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccdc60Q8C4J0 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Ccdc60Q8C4J0 Itpr2-201ENSMUST00000053273 8331 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ccdc60Q8C4J0 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ccdc60Q8C4J0 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
Ccdc60Q8C4J0 Clasp1-212ENSMUST00000189262 6918 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Ccdc60Q8C4J0 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Ccdc60Q8C4J0 Arl15-201ENSMUST00000091201 3364 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ccdc60Q8C4J0 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC8.8□□□□□ -1
Ccdc60Q8C4J0 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC8.8□□□□□ -1
Ccdc60Q8C4J0 Gm15158-201ENSMUST00000120577 570 ntBASIC8.8□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms