Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Trub1Q8C0D0 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.27
Trub1Q8C0D0 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Trub1Q8C0D0 AC124414.1-201ENSMUST00000218033 2946 ntBASIC7.14□□□□□ -1.27
Trub1Q8C0D0 Apbb2-210ENSMUST00000160870 6526 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trub1Q8C0D0 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trub1Q8C0D0 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trub1Q8C0D0 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC7.14□□□□□ -1.27
Trub1Q8C0D0 Gm12903-201ENSMUST00000121015 544 ntBASIC7.14□□□□□ -1.27
Trub1Q8C0D0 Gm12181-201ENSMUST00000121448 531 ntBASIC7.14□□□□□ -1.27
Trub1Q8C0D0 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC7.14□□□□□ -1.27
Trub1Q8C0D0 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC7.14□□□□□ -1.27
Trub1Q8C0D0 Gm25969-201ENSMUST00000157166 132 ntBASIC7.14□□□□□ -1.27
Trub1Q8C0D0 Mir1929-201ENSMUST00000158635 93 ntBASIC7.14□□□□□ -1.27
Trub1Q8C0D0 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trub1Q8C0D0 Speer4e-201ENSMUST00000159973 1603 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Trub1Q8C0D0 Gm16573-201ENSMUST00000160334 801 ntTSL 3 BASIC7.14□□□□□ -1.27
Trub1Q8C0D0 Pdlim5-205ENSMUST00000170361 2010 ntTSL 5 BASIC7.14□□□□□ -1.27
Trub1Q8C0D0 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC7.14□□□□□ -1.27
Trub1Q8C0D0 Gm24756-201ENSMUST00000177002 96 ntBASIC7.14□□□□□ -1.27
Trub1Q8C0D0 Gm18875-201ENSMUST00000188563 882 ntBASIC7.14□□□□□ -1.27
Trub1Q8C0D0 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Trub1Q8C0D0 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC7.14□□□□□ -1.27
Trub1Q8C0D0 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC7.14□□□□□ -1.27
Trub1Q8C0D0 Gm45042-201ENSMUST00000207377 211 ntBASIC7.14□□□□□ -1.27
Trub1Q8C0D0 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC7.14□□□□□ -1.27
Trub1Q8C0D0 5430401H09Rik-202ENSMUST00000218836 2620 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Trub1Q8C0D0 Gm18112-201ENSMUST00000219862 1195 ntBASIC7.14□□□□□ -1.27
Trub1Q8C0D0 AC129308.2-203ENSMUST00000224109 2385 ntBASIC7.14□□□□□ -1.27
Trub1Q8C0D0 AC133598.2-201ENSMUST00000224302 624 ntBASIC7.14□□□□□ -1.27
Trub1Q8C0D0 AC124489.1-201ENSMUST00000225852 526 ntBASIC7.14□□□□□ -1.27
Trub1Q8C0D0 Olfr159-201ENSMUST00000053931 960 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Trub1Q8C0D0 Olfr691-201ENSMUST00000057528 969 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Trub1Q8C0D0 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trub1Q8C0D0 Serpinb1a-201ENSMUST00000076352 1918 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trub1Q8C0D0 Lats2-203ENSMUST00000077981 786 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Trub1Q8C0D0 Gm25189-201ENSMUST00000083911 164 ntBASIC7.14□□□□□ -1.27
Trub1Q8C0D0 Sry-201ENSMUST00000091178 1188 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Trub1Q8C0D0 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Trub1Q8C0D0 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trub1Q8C0D0 Cpeb4-202ENSMUST00000109412 6303 ntAPPRIS ALT1 TSL 5 BASIC7.14□□□□□ -1.27
Trub1Q8C0D0 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Trub1Q8C0D0 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Trub1Q8C0D0 AC138765.2-202ENSMUST00000228418 3435 ntBASIC7.14□□□□□ -1.27
Trub1Q8C0D0 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trub1Q8C0D0 Rprd2-201ENSMUST00000090791 7756 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trub1Q8C0D0 Cep170-201ENSMUST00000057037 6930 ntAPPRIS P2 TSL 5 BASIC7.13□□□□□ -1.27
Trub1Q8C0D0 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC7.13□□□□□ -1.27
Trub1Q8C0D0 Dnajc18-201ENSMUST00000025208 5169 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Trub1Q8C0D0 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Trub1Q8C0D0 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Trub1Q8C0D0 Hsf3-201ENSMUST00000059003 1479 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Trub1Q8C0D0 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Trub1Q8C0D0 Gm42462-201ENSMUST00000196543 1363 ntBASIC7.13□□□□□ -1.27
Trub1Q8C0D0 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Trub1Q8C0D0 Mir688-201ENSMUST00000102055 75 ntBASIC7.13□□□□□ -1.27
Trub1Q8C0D0 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Trub1Q8C0D0 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Trub1Q8C0D0 Gm5319-201ENSMUST00000118965 873 ntBASIC7.13□□□□□ -1.27
Trub1Q8C0D0 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC7.13□□□□□ -1.27
Trub1Q8C0D0 Gm14796-201ENSMUST00000121216 959 ntBASIC7.13□□□□□ -1.27
Trub1Q8C0D0 Mrpl48-ps-201ENSMUST00000121413 636 ntBASIC7.13□□□□□ -1.27
Trub1Q8C0D0 Gm13237-201ENSMUST00000122151 635 ntBASIC7.13□□□□□ -1.27
Trub1Q8C0D0 Gm22025-201ENSMUST00000122734 302 ntBASIC7.13□□□□□ -1.27
Trub1Q8C0D0 Gm25722-201ENSMUST00000157498 279 ntBASIC7.13□□□□□ -1.27
Trub1Q8C0D0 Bud31-201ENSMUST00000159018 741 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Trub1Q8C0D0 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC7.13□□□□□ -1.27
Trub1Q8C0D0 Gm7651-201ENSMUST00000173398 901 ntBASIC7.13□□□□□ -1.27
Trub1Q8C0D0 Gm26959-201ENSMUST00000182376 978 ntBASIC7.13□□□□□ -1.27
Trub1Q8C0D0 Gm9167-201ENSMUST00000182469 962 ntBASIC7.13□□□□□ -1.27
Trub1Q8C0D0 Mir6241-201ENSMUST00000184225 103 ntBASIC7.13□□□□□ -1.27
Trub1Q8C0D0 Gm28580-201ENSMUST00000186767 88 ntBASIC7.13□□□□□ -1.27
Trub1Q8C0D0 Gm29016-201ENSMUST00000187523 1013 ntTSL 3 BASIC7.13□□□□□ -1.27
Trub1Q8C0D0 Gm7412-201ENSMUST00000191692 605 ntBASIC7.13□□□□□ -1.27
Trub1Q8C0D0 Gm44111-201ENSMUST00000204649 399 ntBASIC7.13□□□□□ -1.27
Trub1Q8C0D0 Ldhc-204ENSMUST00000210585 1071 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Trub1Q8C0D0 Gm7943-201ENSMUST00000212078 1034 ntBASIC7.13□□□□□ -1.27
Trub1Q8C0D0 Gm19056-201ENSMUST00000218220 797 ntBASIC7.13□□□□□ -1.27
Trub1Q8C0D0 4930503E24Rik-202ENSMUST00000219657 942 ntBASIC7.13□□□□□ -1.27
Trub1Q8C0D0 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Trub1Q8C0D0 4932702P03Rik-203ENSMUST00000225028 670 ntBASIC7.13□□□□□ -1.27
Trub1Q8C0D0 AC154806.5-204ENSMUST00000228900 867 ntBASIC7.13□□□□□ -1.27
Trub1Q8C0D0 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Trub1Q8C0D0 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Trub1Q8C0D0 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Trub1Q8C0D0 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Trub1Q8C0D0 Mir455-201ENSMUST00000093594 82 ntBASIC7.13□□□□□ -1.27
Trub1Q8C0D0 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Trub1Q8C0D0 Gm43876-201ENSMUST00000203831 3229 ntBASIC7.13□□□□□ -1.27
Trub1Q8C0D0 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC7.13□□□□□ -1.27
Trub1Q8C0D0 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Trub1Q8C0D0 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Trub1Q8C0D0 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC7.13□□□□□ -1.27
Trub1Q8C0D0 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Trub1Q8C0D0 Gm43982-201ENSMUST00000204995 1829 ntBASIC7.13□□□□□ -1.27
Trub1Q8C0D0 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Trub1Q8C0D0 Dpcr1-201ENSMUST00000095467 2611 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Trub1Q8C0D0 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Trub1Q8C0D0 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Trub1Q8C0D0 C2cd3-201ENSMUST00000051777 7803 ntAPPRIS P2 TSL 5 BASIC7.12□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms