Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC9.66□□□□□ -0.86
Usp40Q8BWR4 4933412O06Rik-201ENSMUST00000222681 1123 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Usp40Q8BWR4 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC9.66□□□□□ -0.86
Usp40Q8BWR4 AC123665.3-201ENSMUST00000228735 1216 ntBASIC9.66□□□□□ -0.86
Usp40Q8BWR4 AC154806.5-204ENSMUST00000228900 867 ntBASIC9.66□□□□□ -0.86
Usp40Q8BWR4 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Usp40Q8BWR4 Olfr1509-201ENSMUST00000045066 1010 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Usp40Q8BWR4 Olfr1502-201ENSMUST00000074221 951 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Usp40Q8BWR4 n-R5s95-201ENSMUST00000082684 118 ntBASIC9.66□□□□□ -0.86
Usp40Q8BWR4 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Usp40Q8BWR4 Gm43766-201ENSMUST00000200590 5417 ntBASIC9.66□□□□□ -0.86
Usp40Q8BWR4 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Usp40Q8BWR4 Gatad2b-204ENSMUST00000199607 2418 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Usp40Q8BWR4 Gm9030-201ENSMUST00000218405 2410 ntBASIC9.66□□□□□ -0.86
Usp40Q8BWR4 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Usp40Q8BWR4 Gm9029-201ENSMUST00000219232 2410 ntBASIC9.66□□□□□ -0.86
Usp40Q8BWR4 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Usp40Q8BWR4 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Usp40Q8BWR4 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Usp40Q8BWR4 Olfr54-203ENSMUST00000217480 5048 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Usp40Q8BWR4 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Usp40Q8BWR4 Dglucy-208ENSMUST00000167322 2941 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Usp40Q8BWR4 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Usp40Q8BWR4 6530403H02Rik-202ENSMUST00000182124 3191 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Usp40Q8BWR4 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Usp40Q8BWR4 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Usp40Q8BWR4 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC9.65□□□□□ -0.86
Usp40Q8BWR4 Spen-201ENSMUST00000078886 12082 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Usp40Q8BWR4 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Usp40Q8BWR4 Slc4a10-201ENSMUST00000054484 5320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Usp40Q8BWR4 Itgam-202ENSMUST00000106240 3325 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Usp40Q8BWR4 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC9.65□□□□□ -0.86
Usp40Q8BWR4 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Usp40Q8BWR4 Alkbh8-206ENSMUST00000212294 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Usp40Q8BWR4 Kdm4c-201ENSMUST00000030102 4196 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Usp40Q8BWR4 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Usp40Q8BWR4 Gm15265-202ENSMUST00000143287 814 ntTSL 3 BASIC9.65□□□□□ -0.86
Usp40Q8BWR4 Gm5277-201ENSMUST00000164923 556 ntBASIC9.65□□□□□ -0.86
Usp40Q8BWR4 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Usp40Q8BWR4 Mir6921-201ENSMUST00000183719 80 ntBASIC9.65□□□□□ -0.86
Usp40Q8BWR4 Gm28439-201ENSMUST00000187714 876 ntBASIC9.65□□□□□ -0.86
Usp40Q8BWR4 Gm29470-201ENSMUST00000188007 696 ntBASIC9.65□□□□□ -0.86
Usp40Q8BWR4 Gm28413-201ENSMUST00000189369 291 ntBASIC9.65□□□□□ -0.86
Usp40Q8BWR4 Gm37637-201ENSMUST00000195540 1256 ntBASIC9.65□□□□□ -0.86
Usp40Q8BWR4 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC9.65□□□□□ -0.86
Usp40Q8BWR4 Gm43351-201ENSMUST00000198737 326 ntTSL 5 BASIC9.65□□□□□ -0.86
Usp40Q8BWR4 Gm19175-201ENSMUST00000199895 916 ntBASIC9.65□□□□□ -0.86
Usp40Q8BWR4 Gm18012-201ENSMUST00000204558 773 ntBASIC9.65□□□□□ -0.86
Usp40Q8BWR4 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC9.65□□□□□ -0.86
Usp40Q8BWR4 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Usp40Q8BWR4 AC152922.1-201ENSMUST00000216518 1232 ntBASIC9.65□□□□□ -0.86
Usp40Q8BWR4 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC9.65□□□□□ -0.86
Usp40Q8BWR4 Gm7252-201ENSMUST00000223284 456 ntBASIC9.65□□□□□ -0.86
Usp40Q8BWR4 CT009711.2-201ENSMUST00000225352 934 ntBASIC9.65□□□□□ -0.86
Usp40Q8BWR4 Vmn1r41-202ENSMUST00000226337 888 ntBASIC9.65□□□□□ -0.86
Usp40Q8BWR4 AC154323.2-201ENSMUST00000226557 1151 ntBASIC9.65□□□□□ -0.86
Usp40Q8BWR4 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC9.65□□□□□ -0.86
Usp40Q8BWR4 AC174678.3-201ENSMUST00000227568 362 ntBASIC9.65□□□□□ -0.86
Usp40Q8BWR4 AC125405.2-201ENSMUST00000227862 383 ntBASIC9.65□□□□□ -0.86
Usp40Q8BWR4 Gm28431-201ENSMUST00000185592 2166 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Usp40Q8BWR4 Gm28317-201ENSMUST00000187200 2166 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Usp40Q8BWR4 Gm28681-201ENSMUST00000187387 2166 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Usp40Q8BWR4 Gm28254-201ENSMUST00000189207 2166 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Usp40Q8BWR4 Gm29063-201ENSMUST00000190236 2166 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Usp40Q8BWR4 Rreb1-210ENSMUST00000149745 4320 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Usp40Q8BWR4 Gm45537-201ENSMUST00000211539 2708 ntBASIC9.65□□□□□ -0.86
Usp40Q8BWR4 Pcyt1a-203ENSMUST00000115137 4244 ntTSL 5 BASIC9.65□□□□□ -0.86
Usp40Q8BWR4 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC9.65□□□□□ -0.87
Usp40Q8BWR4 Gm21977-201ENSMUST00000163725 1402 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
Usp40Q8BWR4 Gm8068-201ENSMUST00000167440 1402 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
Usp40Q8BWR4 Nfat5-214ENSMUST00000169453 13380 ntAPPRIS P3 TSL 5 BASIC9.65□□□□□ -0.87
Usp40Q8BWR4 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
Usp40Q8BWR4 Szt2-201ENSMUST00000075406 10965 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Usp40Q8BWR4 4930402H24Rik-201ENSMUST00000044766 6628 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Usp40Q8BWR4 Gp1ba-202ENSMUST00000108551 2480 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Usp40Q8BWR4 Rnase6-202ENSMUST00000226194 2452 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Usp40Q8BWR4 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Usp40Q8BWR4 Tecta-201ENSMUST00000042190 7338 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Usp40Q8BWR4 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC9.64□□□□□ -0.87
Usp40Q8BWR4 AC132465.1-201ENSMUST00000219938 1307 ntBASIC9.64□□□□□ -0.87
Usp40Q8BWR4 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Usp40Q8BWR4 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Usp40Q8BWR4 Slc7a2-204ENSMUST00000118432 3681 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Usp40Q8BWR4 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Usp40Q8BWR4 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Usp40Q8BWR4 Ighv14-4-201ENSMUST00000103475 333 ntAPPRIS ALT2 BASIC9.64□□□□□ -0.87
Usp40Q8BWR4 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC9.64□□□□□ -0.87
Usp40Q8BWR4 Gm22284-201ENSMUST00000104132 132 ntBASIC9.64□□□□□ -0.87
Usp40Q8BWR4 Gm14893-201ENSMUST00000117904 282 ntBASIC9.64□□□□□ -0.87
Usp40Q8BWR4 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Usp40Q8BWR4 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Usp40Q8BWR4 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Usp40Q8BWR4 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Usp40Q8BWR4 Gm23810-201ENSMUST00000175150 74 ntBASIC9.64□□□□□ -0.87
Usp40Q8BWR4 Gm9285-201ENSMUST00000177691 697 ntBASIC9.64□□□□□ -0.87
Usp40Q8BWR4 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Usp40Q8BWR4 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Usp40Q8BWR4 Gm37751-201ENSMUST00000192440 1198 ntBASIC9.64□□□□□ -0.87
Usp40Q8BWR4 Gm37439-201ENSMUST00000193150 856 ntBASIC9.64□□□□□ -0.87
Usp40Q8BWR4 Gm43212-201ENSMUST00000198208 394 ntBASIC9.64□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms