Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC7.12□□□□□ -1.27
Chmp2bQ8BJF9 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC7.12□□□□□ -1.27
Chmp2bQ8BJF9 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Chmp2bQ8BJF9 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC7.12□□□□□ -1.27
Chmp2bQ8BJF9 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC7.12□□□□□ -1.27
Chmp2bQ8BJF9 Gm6567-201ENSMUST00000205529 2095 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Chmp2bQ8BJF9 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Chmp2bQ8BJF9 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Chmp2bQ8BJF9 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Chmp2bQ8BJF9 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Chmp2bQ8BJF9 Gm15160-201ENSMUST00000120553 907 ntBASIC7.12□□□□□ -1.27
Chmp2bQ8BJF9 Gm12181-201ENSMUST00000121448 531 ntBASIC7.12□□□□□ -1.27
Chmp2bQ8BJF9 Gm12499-201ENSMUST00000121961 546 ntBASIC7.12□□□□□ -1.27
Chmp2bQ8BJF9 Gm16248-201ENSMUST00000124238 243 ntBASIC7.12□□□□□ -1.27
Chmp2bQ8BJF9 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Chmp2bQ8BJF9 Gm25505-201ENSMUST00000157220 246 ntBASIC7.12□□□□□ -1.27
Chmp2bQ8BJF9 Gm22206-201ENSMUST00000158612 116 ntBASIC7.12□□□□□ -1.27
Chmp2bQ8BJF9 Gm24057-201ENSMUST00000158616 302 ntBASIC7.12□□□□□ -1.27
Chmp2bQ8BJF9 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Chmp2bQ8BJF9 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Chmp2bQ8BJF9 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Chmp2bQ8BJF9 Gm29357-201ENSMUST00000186877 698 ntBASIC7.12□□□□□ -1.27
Chmp2bQ8BJF9 1700028D13Rik-202ENSMUST00000187272 675 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Chmp2bQ8BJF9 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Chmp2bQ8BJF9 Gm37678-201ENSMUST00000192908 1146 ntBASIC7.12□□□□□ -1.27
Chmp2bQ8BJF9 Gm43387-201ENSMUST00000196896 1066 ntBASIC7.12□□□□□ -1.27
Chmp2bQ8BJF9 Gm42580-201ENSMUST00000197223 753 ntBASIC7.12□□□□□ -1.27
Chmp2bQ8BJF9 1700021F02Rik-201ENSMUST00000197576 350 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Chmp2bQ8BJF9 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC7.12□□□□□ -1.27
Chmp2bQ8BJF9 Gm43192-201ENSMUST00000198002 637 ntTSL 3 BASIC7.12□□□□□ -1.27
Chmp2bQ8BJF9 Gm9710-201ENSMUST00000198053 499 ntBASIC7.12□□□□□ -1.27
Chmp2bQ8BJF9 A26c2-201ENSMUST00000207359 997 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Chmp2bQ8BJF9 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC7.12□□□□□ -1.27
Chmp2bQ8BJF9 AC133948.2-201ENSMUST00000217850 378 ntBASIC7.12□□□□□ -1.27
Chmp2bQ8BJF9 AC163660.1-201ENSMUST00000223696 818 ntBASIC7.12□□□□□ -1.27
Chmp2bQ8BJF9 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Chmp2bQ8BJF9 Gm20900-201ENSMUST00000078729 472 ntBASIC7.12□□□□□ -1.27
Chmp2bQ8BJF9 Gm7493-201ENSMUST00000085919 626 ntBASIC7.12□□□□□ -1.27
Chmp2bQ8BJF9 Ndufa9-201ENSMUST00000088194 1238 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Chmp2bQ8BJF9 Larp1b-204ENSMUST00000099121 1030 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Chmp2bQ8BJF9 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Chmp2bQ8BJF9 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Chmp2bQ8BJF9 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
Chmp2bQ8BJF9 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Chmp2bQ8BJF9 Olfr1396-201ENSMUST00000060398 3946 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Chmp2bQ8BJF9 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
Chmp2bQ8BJF9 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Chmp2bQ8BJF9 Gm45290-201ENSMUST00000211177 3890 ntBASIC7.12□□□□□ -1.27
Chmp2bQ8BJF9 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Chmp2bQ8BJF9 Gm30400-202ENSMUST00000210562 2115 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Chmp2bQ8BJF9 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Chmp2bQ8BJF9 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
Chmp2bQ8BJF9 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Chmp2bQ8BJF9 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Chmp2bQ8BJF9 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
Chmp2bQ8BJF9 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Chmp2bQ8BJF9 AC114585.1-201ENSMUST00000228080 3680 ntBASIC7.11□□□□□ -1.27
Chmp2bQ8BJF9 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Chmp2bQ8BJF9 Mob1b-202ENSMUST00000113229 8967 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Chmp2bQ8BJF9 Gm42874-201ENSMUST00000198888 1774 ntBASIC7.11□□□□□ -1.27
Chmp2bQ8BJF9 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Chmp2bQ8BJF9 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC7.11□□□□□ -1.27
Chmp2bQ8BJF9 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC7.11□□□□□ -1.27
Chmp2bQ8BJF9 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Chmp2bQ8BJF9 Gm10376-201ENSMUST00000100694 555 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
Chmp2bQ8BJF9 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Chmp2bQ8BJF9 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC7.11□□□□□ -1.27
Chmp2bQ8BJF9 Gm7803-201ENSMUST00000117176 1015 ntBASIC7.11□□□□□ -1.27
Chmp2bQ8BJF9 Gm3326-201ENSMUST00000164656 1043 ntBASIC7.11□□□□□ -1.27
Chmp2bQ8BJF9 Gm3208-201ENSMUST00000168281 427 ntBASIC7.11□□□□□ -1.27
Chmp2bQ8BJF9 Gm25082-201ENSMUST00000177296 255 ntBASIC7.11□□□□□ -1.27
Chmp2bQ8BJF9 Gm26723-201ENSMUST00000180771 787 ntTSL 5 BASIC7.11□□□□□ -1.27
Chmp2bQ8BJF9 Gm27401-201ENSMUST00000184052 173 ntBASIC7.11□□□□□ -1.27
Chmp2bQ8BJF9 Gm42965-201ENSMUST00000201254 250 ntBASIC7.11□□□□□ -1.27
Chmp2bQ8BJF9 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC7.11□□□□□ -1.27
Chmp2bQ8BJF9 Gm45454-201ENSMUST00000211484 455 ntBASIC7.11□□□□□ -1.27
Chmp2bQ8BJF9 Tmem156-206ENSMUST00000212640 1271 ntTSL 5 BASIC7.11□□□□□ -1.27
Chmp2bQ8BJF9 AC160112.1-201ENSMUST00000219139 714 ntBASIC7.11□□□□□ -1.27
Chmp2bQ8BJF9 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC7.11□□□□□ -1.27
Chmp2bQ8BJF9 CT009546.3-201ENSMUST00000220914 208 ntBASIC7.11□□□□□ -1.27
Chmp2bQ8BJF9 Ermard-209ENSMUST00000226561 1019 ntBASIC7.11□□□□□ -1.27
Chmp2bQ8BJF9 AC156790.1-201ENSMUST00000226572 559 ntBASIC7.11□□□□□ -1.27
Chmp2bQ8BJF9 AC165154.2-201ENSMUST00000227310 336 ntBASIC7.11□□□□□ -1.27
Chmp2bQ8BJF9 Olfr1247-201ENSMUST00000099771 945 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Chmp2bQ8BJF9 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Chmp2bQ8BJF9 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
Chmp2bQ8BJF9 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
Chmp2bQ8BJF9 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Chmp2bQ8BJF9 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Chmp2bQ8BJF9 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Chmp2bQ8BJF9 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Chmp2bQ8BJF9 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Chmp2bQ8BJF9 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
Chmp2bQ8BJF9 Lipt1-201ENSMUST00000041621 1485 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Chmp2bQ8BJF9 Gm43502-201ENSMUST00000200263 2596 ntBASIC7.11□□□□□ -1.27
Chmp2bQ8BJF9 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
Chmp2bQ8BJF9 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
Chmp2bQ8BJF9 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Chmp2bQ8BJF9 Tnfaip6-201ENSMUST00000065927 1710 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Chmp2bQ8BJF9 Olfr239-203ENSMUST00000214406 3773 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms