Protein–RNA interactions for Protein: Q6KCD5

Nipbl, Nipped-B-like protein, mousemouse

Known RBP Predictions only

Length 2,798 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NipblQ6KCD5 Ankrd6-201ENSMUST00000035719 4683 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
NipblQ6KCD5 Rgs8-203ENSMUST00000111812 3625 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
NipblQ6KCD5 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC5.42□□□□□ -1.54
NipblQ6KCD5 Snord88a-201ENSMUST00000116723 90 ntBASIC5.42□□□□□ -1.54
NipblQ6KCD5 Gm26346-201ENSMUST00000157525 329 ntBASIC5.42□□□□□ -1.54
NipblQ6KCD5 Gm22655-201ENSMUST00000174949 96 ntBASIC5.42□□□□□ -1.54
NipblQ6KCD5 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC5.42□□□□□ -1.54
NipblQ6KCD5 Gm4373-201ENSMUST00000178571 556 ntBASIC5.42□□□□□ -1.54
NipblQ6KCD5 Gm3428-202ENSMUST00000184555 416 ntTSL 5 BASIC5.42□□□□□ -1.54
NipblQ6KCD5 Mir6943-201ENSMUST00000185186 66 ntBASIC5.42□□□□□ -1.54
NipblQ6KCD5 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC5.42□□□□□ -1.54
NipblQ6KCD5 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC5.42□□□□□ -1.54
NipblQ6KCD5 Gm44342-201ENSMUST00000196874 129 ntBASIC5.42□□□□□ -1.54
NipblQ6KCD5 Gm44383-201ENSMUST00000198940 129 ntBASIC5.42□□□□□ -1.54
NipblQ6KCD5 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
NipblQ6KCD5 Gm31931-201ENSMUST00000219666 222 ntBASIC5.42□□□□□ -1.54
NipblQ6KCD5 AC167364.2-201ENSMUST00000221226 1037 ntTSL 5 BASIC5.42□□□□□ -1.54
NipblQ6KCD5 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
NipblQ6KCD5 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
NipblQ6KCD5 Gm38339-201ENSMUST00000195479 1829 ntBASIC5.42□□□□□ -1.54
NipblQ6KCD5 Olfr1509-202ENSMUST00000205900 2444 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
NipblQ6KCD5 St7-204ENSMUST00000077080 1887 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NipblQ6KCD5 Muc4-201ENSMUST00000096106 11277 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
NipblQ6KCD5 Olfr943-202ENSMUST00000213176 8275 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
NipblQ6KCD5 Ank1-215ENSMUST00000173248 7100 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
NipblQ6KCD5 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
NipblQ6KCD5 Tpp1-201ENSMUST00000033184 3558 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
NipblQ6KCD5 Gm45767-201ENSMUST00000212778 4561 ntBASIC5.42□□□□□ -1.54
NipblQ6KCD5 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NipblQ6KCD5 Gabrq-202ENSMUST00000114553 4943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
NipblQ6KCD5 Armcx3-201ENSMUST00000081834 3327 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
NipblQ6KCD5 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC5.42□□□□□ -1.54
NipblQ6KCD5 Scn2a-205ENSMUST00000200829 6348 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
NipblQ6KCD5 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NipblQ6KCD5 Gm22256-201ENSMUST00000102291 107 ntBASIC5.42□□□□□ -1.54
NipblQ6KCD5 Snora35-201ENSMUST00000104579 128 ntBASIC5.42□□□□□ -1.54
NipblQ6KCD5 Gm12959-201ENSMUST00000119396 403 ntBASIC5.42□□□□□ -1.54
NipblQ6KCD5 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC5.42□□□□□ -1.54
NipblQ6KCD5 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NipblQ6KCD5 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NipblQ6KCD5 Ighv5-19-201ENSMUST00000193466 297 ntBASIC5.42□□□□□ -1.54
NipblQ6KCD5 Gm6558-203ENSMUST00000195395 612 ntTSL 5 BASIC5.42□□□□□ -1.54
NipblQ6KCD5 Gm43846-201ENSMUST00000200502 932 ntBASIC5.42□□□□□ -1.54
NipblQ6KCD5 Gm18690-201ENSMUST00000204488 985 ntBASIC5.42□□□□□ -1.54
NipblQ6KCD5 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC5.42□□□□□ -1.54
NipblQ6KCD5 Gm18943-201ENSMUST00000207357 1216 ntBASIC5.42□□□□□ -1.54
NipblQ6KCD5 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC5.42□□□□□ -1.54
NipblQ6KCD5 Gm5654-201ENSMUST00000217787 475 ntBASIC5.42□□□□□ -1.54
NipblQ6KCD5 AC154219.1-201ENSMUST00000220764 1262 ntBASIC5.42□□□□□ -1.54
NipblQ6KCD5 AC154382.1-201ENSMUST00000220958 1282 ntBASIC5.42□□□□□ -1.54
NipblQ6KCD5 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NipblQ6KCD5 EPPK1-201ENSMUST00000226781 12325 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
NipblQ6KCD5 AC156574.1-201ENSMUST00000227084 452 ntBASIC5.42□□□□□ -1.54
NipblQ6KCD5 AC154806.1-203ENSMUST00000227370 1032 ntBASIC5.42□□□□□ -1.54
NipblQ6KCD5 Ncald-203ENSMUST00000119730 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
NipblQ6KCD5 Ephx2-202ENSMUST00000224698 1985 ntBASIC5.42□□□□□ -1.54
NipblQ6KCD5 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
NipblQ6KCD5 Tank-202ENSMUST00000112494 2698 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NipblQ6KCD5 Fubp1-202ENSMUST00000166984 6523 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
NipblQ6KCD5 Naa25-201ENSMUST00000042163 5447 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NipblQ6KCD5 Vmn1r199-203ENSMUST00000227689 5537 ntAPPRIS ALT2 BASIC5.41□□□□□ -1.54
NipblQ6KCD5 Sec16b-202ENSMUST00000086130 4661 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NipblQ6KCD5 Gm15681-201ENSMUST00000137501 2704 ntBASIC5.41□□□□□ -1.54
NipblQ6KCD5 Gm24855-201ENSMUST00000104848 97 ntBASIC5.41□□□□□ -1.54
NipblQ6KCD5 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC5.41□□□□□ -1.54
NipblQ6KCD5 Gm13835-201ENSMUST00000118459 685 ntBASIC5.41□□□□□ -1.54
NipblQ6KCD5 Gm13007-201ENSMUST00000121866 365 ntBASIC5.41□□□□□ -1.54
NipblQ6KCD5 Gm11879-201ENSMUST00000121885 702 ntBASIC5.41□□□□□ -1.54
NipblQ6KCD5 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC5.41□□□□□ -1.54
NipblQ6KCD5 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC5.41□□□□□ -1.54
NipblQ6KCD5 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC5.41□□□□□ -1.54
NipblQ6KCD5 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC5.41□□□□□ -1.54
NipblQ6KCD5 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC5.41□□□□□ -1.54
NipblQ6KCD5 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC5.41□□□□□ -1.54
NipblQ6KCD5 Gm15736-201ENSMUST00000141710 420 ntTSL 3 BASIC5.41□□□□□ -1.54
NipblQ6KCD5 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NipblQ6KCD5 Gm16060-201ENSMUST00000153140 478 ntBASIC5.41□□□□□ -1.54
NipblQ6KCD5 Gm23968-201ENSMUST00000175047 125 ntBASIC5.41□□□□□ -1.54
NipblQ6KCD5 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
NipblQ6KCD5 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
NipblQ6KCD5 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
NipblQ6KCD5 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
NipblQ6KCD5 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
NipblQ6KCD5 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
NipblQ6KCD5 Gm27005-201ENSMUST00000182783 921 ntBASIC5.41□□□□□ -1.54
NipblQ6KCD5 Gm28918-201ENSMUST00000188822 699 ntBASIC5.41□□□□□ -1.54
NipblQ6KCD5 Gm37669-201ENSMUST00000192184 820 ntBASIC5.41□□□□□ -1.54
NipblQ6KCD5 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC5.41□□□□□ -1.54
NipblQ6KCD5 Gm37637-201ENSMUST00000195540 1256 ntBASIC5.41□□□□□ -1.54
NipblQ6KCD5 Igkv12-66-201ENSMUST00000199305 348 ntBASIC5.41□□□□□ -1.54
NipblQ6KCD5 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC5.41□□□□□ -1.54
NipblQ6KCD5 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NipblQ6KCD5 Gm22865-201ENSMUST00000083949 214 ntBASIC5.41□□□□□ -1.54
NipblQ6KCD5 Olfr62-202ENSMUST00000213189 2570 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
NipblQ6KCD5 Pdgfd-201ENSMUST00000058692 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
NipblQ6KCD5 Fmn1-203ENSMUST00000102547 4967 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
NipblQ6KCD5 Meis2-206ENSMUST00000110908 3697 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NipblQ6KCD5 Olfr766-ps1-201ENSMUST00000204515 2909 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
NipblQ6KCD5 Gm45746-201ENSMUST00000212623 2447 ntBASIC5.41□□□□□ -1.54
NipblQ6KCD5 Zzz3-202ENSMUST00000106100 7607 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms