Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
Trim43aQ3TL54 Gm18359-201ENSMUST00000173024 1459 ntBASIC7.41□□□□□ -1.22
Trim43aQ3TL54 Gm37107-201ENSMUST00000195326 2552 ntBASIC7.41□□□□□ -1.22
Trim43aQ3TL54 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Trim43aQ3TL54 Gm37382-201ENSMUST00000193032 1596 ntBASIC7.41□□□□□ -1.22
Trim43aQ3TL54 AC107763.1-202ENSMUST00000225021 2663 ntBASIC7.41□□□□□ -1.22
Trim43aQ3TL54 AC135119.1-204ENSMUST00000228036 2663 ntBASIC7.41□□□□□ -1.22
Trim43aQ3TL54 Gm37067-201ENSMUST00000195730 1628 ntBASIC7.41□□□□□ -1.22
Trim43aQ3TL54 B830042I05Rik-201ENSMUST00000208333 1620 ntTSL 5 BASIC7.41□□□□□ -1.22
Trim43aQ3TL54 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Trim43aQ3TL54 Gm6679-201ENSMUST00000191467 1869 ntBASIC7.41□□□□□ -1.22
Trim43aQ3TL54 Nol8-203ENSMUST00000221142 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Trim43aQ3TL54 Gm44661-201ENSMUST00000208830 3503 ntBASIC7.4□□□□□ -1.22
Trim43aQ3TL54 AC124183.1-201ENSMUST00000222367 2135 ntBASIC7.4□□□□□ -1.22
Trim43aQ3TL54 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Trim43aQ3TL54 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Trim43aQ3TL54 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC7.4□□□□□ -1.22
Trim43aQ3TL54 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC7.4□□□□□ -1.22
Trim43aQ3TL54 AC164567.3-201ENSMUST00000217743 2869 ntBASIC7.4□□□□□ -1.22
Trim43aQ3TL54 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Trim43aQ3TL54 Gm23701-201ENSMUST00000103893 110 ntBASIC7.4□□□□□ -1.22
Trim43aQ3TL54 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC7.4□□□□□ -1.22
Trim43aQ3TL54 2810403D21Rik-201ENSMUST00000123040 601 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Trim43aQ3TL54 Gm16248-201ENSMUST00000124238 243 ntBASIC7.4□□□□□ -1.22
Trim43aQ3TL54 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
Trim43aQ3TL54 Tvp23bos-201ENSMUST00000148598 1011 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Trim43aQ3TL54 Smarca2-210ENSMUST00000176475 983 ntTSL 5 BASIC7.4□□□□□ -1.22
Trim43aQ3TL54 Gm20111-201ENSMUST00000184830 319 ntBASIC7.4□□□□□ -1.22
Trim43aQ3TL54 Gm28665-201ENSMUST00000189269 670 ntBASIC7.4□□□□□ -1.22
Trim43aQ3TL54 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC7.4□□□□□ -1.22
Trim43aQ3TL54 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC7.4□□□□□ -1.22
Trim43aQ3TL54 Gm42734-201ENSMUST00000201656 878 ntBASIC7.4□□□□□ -1.22
Trim43aQ3TL54 Gm5314-201ENSMUST00000204852 466 ntBASIC7.4□□□□□ -1.22
Trim43aQ3TL54 Mypopos-203ENSMUST00000206304 441 ntTSL 3 BASIC7.4□□□□□ -1.22
Trim43aQ3TL54 RMST_1.1-203ENSMUST00000217866 775 ntTSL 3 BASIC7.4□□□□□ -1.22
Trim43aQ3TL54 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Trim43aQ3TL54 Gm19154-201ENSMUST00000223330 940 ntBASIC7.4□□□□□ -1.22
Trim43aQ3TL54 AC140267.1-201ENSMUST00000226485 213 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Trim43aQ3TL54 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Trim43aQ3TL54 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Trim43aQ3TL54 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Trim43aQ3TL54 Med12-201ENSMUST00000087948 6809 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Trim43aQ3TL54 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Trim43aQ3TL54 AC107742.1-201ENSMUST00000227769 1390 ntBASIC7.4□□□□□ -1.22
Trim43aQ3TL54 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Trim43aQ3TL54 Cdk14-204ENSMUST00000115452 1567 ntTSL 5 BASIC7.4□□□□□ -1.22
Trim43aQ3TL54 P2ry14-201ENSMUST00000065220 1672 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Trim43aQ3TL54 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
Trim43aQ3TL54 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
Trim43aQ3TL54 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC7.4□□□□□ -1.23
Trim43aQ3TL54 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Trim43aQ3TL54 Vmn1r90-203ENSMUST00000226510 6674 ntAPPRIS ALT2 BASIC7.39□□□□□ -1.23
Trim43aQ3TL54 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Trim43aQ3TL54 CT009480.2-201ENSMUST00000225152 3369 ntBASIC7.39□□□□□ -1.23
Trim43aQ3TL54 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Trim43aQ3TL54 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Trim43aQ3TL54 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC7.39□□□□□ -1.23
Trim43aQ3TL54 4931403G20Rik-201ENSMUST00000180861 1699 ntTSL 5 BASIC7.39□□□□□ -1.23
Trim43aQ3TL54 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC7.39□□□□□ -1.23
Trim43aQ3TL54 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC7.39□□□□□ -1.23
Trim43aQ3TL54 Gm22439-201ENSMUST00000104048 132 ntBASIC7.39□□□□□ -1.23
Trim43aQ3TL54 Gm24284-201ENSMUST00000104240 142 ntBASIC7.39□□□□□ -1.23
Trim43aQ3TL54 Lrrc51-204ENSMUST00000106964 872 ntTSL 2 BASIC7.39□□□□□ -1.23
Trim43aQ3TL54 Fxyd1-203ENSMUST00000108110 492 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Trim43aQ3TL54 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC7.39□□□□□ -1.23
Trim43aQ3TL54 1700001G01Rik-204ENSMUST00000153022 928 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Trim43aQ3TL54 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Trim43aQ3TL54 Gm6061-201ENSMUST00000175860 492 ntBASIC7.39□□□□□ -1.23
Trim43aQ3TL54 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Trim43aQ3TL54 Gm24923-201ENSMUST00000178201 88 ntBASIC7.39□□□□□ -1.23
Trim43aQ3TL54 Gm28117-201ENSMUST00000188472 371 ntBASIC7.39□□□□□ -1.23
Trim43aQ3TL54 Gm28087-201ENSMUST00000189195 767 ntTSL 5 BASIC7.39□□□□□ -1.23
Trim43aQ3TL54 Gm3841-201ENSMUST00000191399 451 ntBASIC7.39□□□□□ -1.23
Trim43aQ3TL54 Gm37152-201ENSMUST00000193369 1175 ntBASIC7.39□□□□□ -1.23
Trim43aQ3TL54 Gm18428-201ENSMUST00000194986 791 ntBASIC7.39□□□□□ -1.23
Trim43aQ3TL54 Gm43656-201ENSMUST00000197882 434 ntBASIC7.39□□□□□ -1.23
Trim43aQ3TL54 AL713985.1-201ENSMUST00000219030 420 ntBASIC7.39□□□□□ -1.23
Trim43aQ3TL54 AC152940.1-201ENSMUST00000226504 139 ntBASIC7.39□□□□□ -1.23
Trim43aQ3TL54 AC165106.1-201ENSMUST00000227580 408 ntBASIC7.39□□□□□ -1.23
Trim43aQ3TL54 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Trim43aQ3TL54 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Trim43aQ3TL54 Snora21-201ENSMUST00000082967 137 ntBASIC7.39□□□□□ -1.23
Trim43aQ3TL54 Cbx3-202ENSMUST00000094623 1080 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Trim43aQ3TL54 Iars-202ENSMUST00000164260 3789 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Trim43aQ3TL54 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC7.39□□□□□ -1.23
Trim43aQ3TL54 Olfr1085-202ENSMUST00000213279 5191 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Trim43aQ3TL54 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Trim43aQ3TL54 Gm36981-201ENSMUST00000192340 4485 ntBASIC7.39□□□□□ -1.23
Trim43aQ3TL54 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Trim43aQ3TL54 Gm42994-201ENSMUST00000195964 2549 ntBASIC7.39□□□□□ -1.23
Trim43aQ3TL54 Gm37621-201ENSMUST00000194716 5531 ntBASIC7.39□□□□□ -1.23
Trim43aQ3TL54 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Trim43aQ3TL54 Gm43872-201ENSMUST00000203218 2213 ntBASIC7.39□□□□□ -1.23
Trim43aQ3TL54 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
Trim43aQ3TL54 Olfr738-202ENSMUST00000214320 2114 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Trim43aQ3TL54 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Trim43aQ3TL54 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
Trim43aQ3TL54 AC165080.3-201ENSMUST00000217162 3116 ntBASIC7.38□□□□□ -1.23
Trim43aQ3TL54 Gen1-201ENSMUST00000166117 5268 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Trim43aQ3TL54 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms