Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Grhl1-201ENSMUST00000020985 3070 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Col8a1Q00780 Yes1-202ENSMUST00000168707 2259 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Col8a1Q00780 Mob1b-202ENSMUST00000113229 8967 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Col8a1Q00780 AC163342.1-201ENSMUST00000216533 2718 ntTSL 5 BASIC6.52□□□□□ -1.37
Col8a1Q00780 Eif4e2-207ENSMUST00000113235 3473 ntTSL 5 BASIC6.52□□□□□ -1.37
Col8a1Q00780 Mtrf1-201ENSMUST00000022600 1799 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Col8a1Q00780 Gm6117-201ENSMUST00000150540 1333 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Col8a1Q00780 Zbtb44-202ENSMUST00000167346 1308 ntTSL 3 BASIC6.51□□□□□ -1.37
Col8a1Q00780 Prkaa1-202ENSMUST00000228218 4618 ntBASIC6.51□□□□□ -1.37
Col8a1Q00780 Haus2-203ENSMUST00000124187 3154 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col8a1Q00780 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col8a1Q00780 Zfp963-201ENSMUST00000130458 2291 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col8a1Q00780 Plce1-201ENSMUST00000169713 9439 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col8a1Q00780 Gm37065-203ENSMUST00000192498 1622 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Col8a1Q00780 Gm37647-201ENSMUST00000194556 3143 ntBASIC6.51□□□□□ -1.37
Col8a1Q00780 Esrrg-202ENSMUST00000110938 5373 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col8a1Q00780 Fam60a-211ENSMUST00000204435 2785 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Col8a1Q00780 Chrna1-201ENSMUST00000028515 4386 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col8a1Q00780 Adgrg1-202ENSMUST00000179619 3616 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col8a1Q00780 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC6.51□□□□□ -1.37
Col8a1Q00780 Iglv1-201ENSMUST00000103746 391 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Col8a1Q00780 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Col8a1Q00780 Tceal7-201ENSMUST00000113116 971 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col8a1Q00780 Gm12939-201ENSMUST00000117303 165 ntBASIC6.51□□□□□ -1.37
Col8a1Q00780 5033423K11Rik-201ENSMUST00000117311 787 ntBASIC6.51□□□□□ -1.37
Col8a1Q00780 Gm12465-201ENSMUST00000118591 300 ntBASIC6.51□□□□□ -1.37
Col8a1Q00780 Gm3931-201ENSMUST00000119038 455 ntBASIC6.51□□□□□ -1.37
Col8a1Q00780 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC6.51□□□□□ -1.37
Col8a1Q00780 Gm14863-201ENSMUST00000119648 307 ntBASIC6.51□□□□□ -1.37
Col8a1Q00780 Gm11483-201ENSMUST00000119839 247 ntBASIC6.51□□□□□ -1.37
Col8a1Q00780 Gm11371-201ENSMUST00000120294 385 ntBASIC6.51□□□□□ -1.37
Col8a1Q00780 Gm12104-201ENSMUST00000120359 979 ntBASIC6.51□□□□□ -1.37
Col8a1Q00780 Gm14925-201ENSMUST00000120611 438 ntBASIC6.51□□□□□ -1.37
Col8a1Q00780 Gm12870-201ENSMUST00000121383 1016 ntBASIC6.51□□□□□ -1.37
Col8a1Q00780 Gm5843-201ENSMUST00000121631 476 ntBASIC6.51□□□□□ -1.37
Col8a1Q00780 Gm14848-201ENSMUST00000121850 467 ntBASIC6.51□□□□□ -1.37
Col8a1Q00780 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col8a1Q00780 Gm15345-201ENSMUST00000128240 663 ntTSL 3 BASIC6.51□□□□□ -1.37
Col8a1Q00780 Gm15845-201ENSMUST00000130244 996 ntTSL 2 BASIC6.51□□□□□ -1.37
Col8a1Q00780 Trp53cor1-201ENSMUST00000133221 2956 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Col8a1Q00780 Gm13663-202ENSMUST00000145563 643 ntTSL 5 BASIC6.51□□□□□ -1.37
Col8a1Q00780 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC6.51□□□□□ -1.37
Col8a1Q00780 Gm21293-201ENSMUST00000170919 864 ntTSL 5 BASIC6.51□□□□□ -1.37
Col8a1Q00780 Gm24812-201ENSMUST00000175315 284 ntBASIC6.51□□□□□ -1.37
Col8a1Q00780 Gm25640-201ENSMUST00000175378 125 ntBASIC6.51□□□□□ -1.37
Col8a1Q00780 Gm17750-201ENSMUST00000182477 529 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Col8a1Q00780 Gm27034-201ENSMUST00000182552 940 ntBASIC6.51□□□□□ -1.37
Col8a1Q00780 Gm27602-201ENSMUST00000183861 111 ntBASIC6.51□□□□□ -1.37
Col8a1Q00780 Gm28580-201ENSMUST00000186767 88 ntBASIC6.51□□□□□ -1.37
Col8a1Q00780 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC6.51□□□□□ -1.37
Col8a1Q00780 Gm18183-201ENSMUST00000191024 615 ntBASIC6.51□□□□□ -1.37
Col8a1Q00780 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC6.51□□□□□ -1.37
Col8a1Q00780 Gm43245-201ENSMUST00000197603 468 ntBASIC6.51□□□□□ -1.37
Col8a1Q00780 Gm44374-201ENSMUST00000199821 140 ntBASIC6.51□□□□□ -1.37
Col8a1Q00780 Gm2762-203ENSMUST00000201658 1234 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Col8a1Q00780 4930425L21Rik-201ENSMUST00000203439 899 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Col8a1Q00780 Gm18689-201ENSMUST00000203969 902 ntBASIC6.51□□□□□ -1.37
Col8a1Q00780 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC6.51□□□□□ -1.37
Col8a1Q00780 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC6.51□□□□□ -1.37
Col8a1Q00780 Gm4259-201ENSMUST00000206489 758 ntBASIC6.51□□□□□ -1.37
Col8a1Q00780 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Col8a1Q00780 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC6.51□□□□□ -1.37
Col8a1Q00780 AC160338.2-201ENSMUST00000215508 281 ntTSL 5 BASIC6.51□□□□□ -1.37
Col8a1Q00780 AC148328.2-201ENSMUST00000216960 262 ntBASIC6.51□□□□□ -1.37
Col8a1Q00780 4930579P08Rik-201ENSMUST00000218193 1227 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Col8a1Q00780 Gm7119-201ENSMUST00000221345 695 ntBASIC6.51□□□□□ -1.37
Col8a1Q00780 AC159267.1-201ENSMUST00000226702 678 ntBASIC6.51□□□□□ -1.37
Col8a1Q00780 AC115304.1-202ENSMUST00000226850 837 ntBASIC6.51□□□□□ -1.37
Col8a1Q00780 Dlgap5-201ENSMUST00000043296 2964 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col8a1Q00780 Gng2-201ENSMUST00000055100 572 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
Col8a1Q00780 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC6.51□□□□□ -1.37
Col8a1Q00780 Gm22748-201ENSMUST00000082493 136 ntBASIC6.51□□□□□ -1.37
Col8a1Q00780 Adamts3-202ENSMUST00000163159 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col8a1Q00780 Adamts3-201ENSMUST00000061427 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col8a1Q00780 Lrrc66-201ENSMUST00000087177 3198 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col8a1Q00780 AC124675.1-201ENSMUST00000226263 1390 ntBASIC6.51□□□□□ -1.37
Col8a1Q00780 Nasp-203ENSMUST00000081182 1461 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Col8a1Q00780 Serbp1-201ENSMUST00000042990 15474 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col8a1Q00780 Gm43679-201ENSMUST00000197051 3677 ntBASIC6.51□□□□□ -1.37
Col8a1Q00780 Piwil2-201ENSMUST00000048129 4916 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col8a1Q00780 4930590J08Rik-201ENSMUST00000059318 2802 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Col8a1Q00780 Gpr182-201ENSMUST00000079692 3954 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col8a1Q00780 Tbc1d24-208ENSMUST00000201089 4081 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Col8a1Q00780 Synj2-201ENSMUST00000061091 4072 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col8a1Q00780 Ccdc114-203ENSMUST00000210602 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col8a1Q00780 Smco3-203ENSMUST00000203468 1791 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col8a1Q00780 Senp1-201ENSMUST00000044189 6575 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col8a1Q00780 6330549D23Rik-203ENSMUST00000160818 3228 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Col8a1Q00780 Hmgxb4-202ENSMUST00000109940 2656 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Col8a1Q00780 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Col8a1Q00780 Zc2hc1c-201ENSMUST00000059341 4482 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Col8a1Q00780 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Col8a1Q00780 4930528G23Rik-201ENSMUST00000124575 1723 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Col8a1Q00780 4930444A19Rik-201ENSMUST00000188243 2117 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Col8a1Q00780 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Col8a1Q00780 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Col8a1Q00780 Fto-202ENSMUST00000125471 3887 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Col8a1Q00780 Afap1l2-201ENSMUST00000111584 3597 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Col8a1Q00780 Sla-202ENSMUST00000164163 2952 ntAPPRIS P3 TSL 5 BASIC6.5□□□□□ -1.37
Col8a1Q00780 Gm19801-201ENSMUST00000218231 1882 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms