Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Gm4246-201ENSMUST00000172822 216 ntBASIC5.88□□□□□ -1.47
SgcaP82350 Krr1-204ENSMUST00000174653 972 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
SgcaP82350 Vmn2r-ps31-201ENSMUST00000176474 760 ntBASIC5.88□□□□□ -1.47
SgcaP82350 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SgcaP82350 Gm5147-201ENSMUST00000185999 794 ntBASIC5.88□□□□□ -1.47
SgcaP82350 Gm43694-201ENSMUST00000200773 1119 ntBASIC5.88□□□□□ -1.47
SgcaP82350 4930425L21Rik-201ENSMUST00000203439 899 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SgcaP82350 Gm18422-201ENSMUST00000203663 1032 ntBASIC5.88□□□□□ -1.47
SgcaP82350 Gm44566-201ENSMUST00000207638 304 ntBASIC5.88□□□□□ -1.47
SgcaP82350 Gm18629-201ENSMUST00000222496 884 ntBASIC5.88□□□□□ -1.47
SgcaP82350 AC107663.2-201ENSMUST00000225534 1234 ntBASIC5.88□□□□□ -1.47
SgcaP82350 AC116487.1-201ENSMUST00000227033 339 ntBASIC5.88□□□□□ -1.47
SgcaP82350 Olfr641-201ENSMUST00000098183 939 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
SgcaP82350 Olfr1243-201ENSMUST00000099775 918 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
SgcaP82350 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SgcaP82350 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
SgcaP82350 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SgcaP82350 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
SgcaP82350 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SgcaP82350 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SgcaP82350 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC5.88□□□□□ -1.47
SgcaP82350 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC5.87□□□□□ -1.47
SgcaP82350 AC124516.1-201ENSMUST00000221845 3544 ntBASIC5.87□□□□□ -1.47
SgcaP82350 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SgcaP82350 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SgcaP82350 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SgcaP82350 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SgcaP82350 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
SgcaP82350 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
SgcaP82350 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SgcaP82350 Nsd1-207ENSMUST00000224973 9905 ntBASIC5.87□□□□□ -1.47
SgcaP82350 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
SgcaP82350 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
SgcaP82350 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
SgcaP82350 Igkv8-28-201ENSMUST00000103380 305 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
SgcaP82350 Cep112-202ENSMUST00000106715 1161 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SgcaP82350 Apoa2-204ENSMUST00000111321 518 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
SgcaP82350 Rhox3c-201ENSMUST00000115188 1053 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
SgcaP82350 Gm13915-201ENSMUST00000119314 931 ntBASIC5.87□□□□□ -1.47
SgcaP82350 Gm11901-201ENSMUST00000120412 437 ntBASIC5.87□□□□□ -1.47
SgcaP82350 Gm25320-201ENSMUST00000122551 324 ntBASIC5.87□□□□□ -1.47
SgcaP82350 Gm12811-201ENSMUST00000125237 667 ntTSL 3 BASIC5.87□□□□□ -1.47
SgcaP82350 Gm11789-205ENSMUST00000148579 649 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SgcaP82350 1700034H15Rik-205ENSMUST00000154116 926 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SgcaP82350 Gm26351-201ENSMUST00000157532 232 ntBASIC5.87□□□□□ -1.47
SgcaP82350 Gm23094-201ENSMUST00000157551 322 ntBASIC5.87□□□□□ -1.47
SgcaP82350 Gm24530-201ENSMUST00000157948 288 ntBASIC5.87□□□□□ -1.47
SgcaP82350 Gm16116-201ENSMUST00000159472 430 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SgcaP82350 Gm8624-202ENSMUST00000165677 669 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SgcaP82350 Gm25692-201ENSMUST00000175444 125 ntBASIC5.87□□□□□ -1.47
SgcaP82350 Gm22569-201ENSMUST00000175545 124 ntBASIC5.87□□□□□ -1.47
SgcaP82350 Gm25947-201ENSMUST00000180343 110 ntBASIC5.87□□□□□ -1.47
SgcaP82350 Gm4891-201ENSMUST00000182279 912 ntBASIC5.87□□□□□ -1.47
SgcaP82350 Gm9274-201ENSMUST00000182505 984 ntBASIC5.87□□□□□ -1.47
SgcaP82350 Mir6912-201ENSMUST00000184456 70 ntBASIC5.87□□□□□ -1.47
SgcaP82350 Gm7436-201ENSMUST00000187229 391 ntBASIC5.87□□□□□ -1.47
SgcaP82350 Gm28973-201ENSMUST00000189310 613 ntBASIC5.87□□□□□ -1.47
SgcaP82350 Gm29008-201ENSMUST00000189387 298 ntBASIC5.87□□□□□ -1.47
SgcaP82350 1700025K24Rik-201ENSMUST00000190635 740 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SgcaP82350 Gm37469-201ENSMUST00000193728 890 ntBASIC5.87□□□□□ -1.47
SgcaP82350 Wars2-205ENSMUST00000198044 403 ntTSL 3 BASIC5.87□□□□□ -1.47
SgcaP82350 Gm9710-201ENSMUST00000198053 499 ntBASIC5.87□□□□□ -1.47
SgcaP82350 Gm43346-201ENSMUST00000198290 685 ntTSL 2 BASIC5.87□□□□□ -1.47
SgcaP82350 Gm34583-203ENSMUST00000202586 454 ntBASIC5.87□□□□□ -1.47
SgcaP82350 Tex26-207ENSMUST00000202920 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
SgcaP82350 Gm45739-201ENSMUST00000213094 388 ntBASIC5.87□□□□□ -1.47
SgcaP82350 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC5.87□□□□□ -1.47
SgcaP82350 CT009711.4-201ENSMUST00000225685 198 ntBASIC5.87□□□□□ -1.47
SgcaP82350 Vmn1r41-202ENSMUST00000226337 888 ntBASIC5.87□□□□□ -1.47
SgcaP82350 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC5.87□□□□□ -1.47
SgcaP82350 AC122356.2-201ENSMUST00000226962 820 ntBASIC5.87□□□□□ -1.47
SgcaP82350 Llcfc1-201ENSMUST00000031900 741 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SgcaP82350 Defb3-201ENSMUST00000033852 275 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SgcaP82350 H2al1m-201ENSMUST00000073949 535 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
SgcaP82350 Klk1b3-201ENSMUST00000085450 889 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SgcaP82350 Ndufa9-201ENSMUST00000088194 1238 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
SgcaP82350 Gm10283-201ENSMUST00000093494 354 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SgcaP82350 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
SgcaP82350 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
SgcaP82350 Gm44141-201ENSMUST00000204231 1583 ntBASIC5.87□□□□□ -1.47
SgcaP82350 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
SgcaP82350 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
SgcaP82350 Glra4-201ENSMUST00000018739 1831 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SgcaP82350 Sdcbp-202ENSMUST00000103008 2086 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
SgcaP82350 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
SgcaP82350 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
SgcaP82350 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SgcaP82350 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC5.87□□□□□ -1.47
SgcaP82350 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC5.87□□□□□ -1.47
SgcaP82350 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC5.87□□□□□ -1.47
SgcaP82350 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SgcaP82350 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SgcaP82350 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC5.87□□□□□ -1.47
SgcaP82350 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SgcaP82350 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SgcaP82350 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
SgcaP82350 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SgcaP82350 Adam30-201ENSMUST00000050342 3510 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SgcaP82350 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
SgcaP82350 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms