Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Exd1-203ENSMUST00000171024 5290 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nphp4P59240 Olfr585-201ENSMUST00000104881 1030 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Nphp4P59240 Dglucy-208ENSMUST00000167322 2941 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nphp4P59240 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
Nphp4P59240 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC9.43□□□□□ -0.9
Nphp4P59240 Gm26744-201ENSMUST00000181834 1731 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Nphp4P59240 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Nphp4P59240 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC9.43□□□□□ -0.9
Nphp4P59240 Gm43033-201ENSMUST00000199682 425 ntBASIC9.43□□□□□ -0.9
Nphp4P59240 Gm7961-201ENSMUST00000201338 1436 ntBASIC9.43□□□□□ -0.9
Nphp4P59240 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Nphp4P59240 Gm35188-201ENSMUST00000218869 535 ntTSL 3 BASIC9.43□□□□□ -0.9
Nphp4P59240 AC133207.1-201ENSMUST00000218960 1431 ntTSL 5 BASIC9.43□□□□□ -0.9
Nphp4P59240 AC124601.1-201ENSMUST00000220531 135 ntBASIC9.43□□□□□ -0.9
Nphp4P59240 AC132260.1-201ENSMUST00000225499 734 ntBASIC9.43□□□□□ -0.9
Nphp4P59240 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nphp4P59240 Ccdc187-203ENSMUST00000227200 9528 ntAPPRIS ALT2 BASIC9.43□□□□□ -0.9
Nphp4P59240 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nphp4P59240 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Nphp4P59240 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC9.43□□□□□ -0.9
Nphp4P59240 9530053A07Rik-201ENSMUST00000059886 7922 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Nphp4P59240 Star-201ENSMUST00000033979 4046 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nphp4P59240 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nphp4P59240 Gm6150-202ENSMUST00000219888 2977 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Nphp4P59240 Dlg2-201ENSMUST00000074273 5278 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Nphp4P59240 Gm44737-201ENSMUST00000206950 2355 ntTSL 5 BASIC9.43□□□□□ -0.9
Nphp4P59240 Rtel1-205ENSMUST00000108815 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nphp4P59240 Smim17-202ENSMUST00000160218 3197 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nphp4P59240 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Nphp4P59240 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nphp4P59240 Tg-201ENSMUST00000065916 8454 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nphp4P59240 Kdm4c-201ENSMUST00000030102 4196 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Nphp4P59240 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC9.43□□□□□ -0.9
Nphp4P59240 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Nphp4P59240 Gm13403-201ENSMUST00000127936 3651 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Nphp4P59240 Srek1ip1-201ENSMUST00000022230 2365 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Nphp4P59240 Erg-202ENSMUST00000113846 3249 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Nphp4P59240 Ctnnd1-222ENSMUST00000111696 6281 ntTSL 5 BASIC9.42□□□□□ -0.9
Nphp4P59240 Gm9839-201ENSMUST00000195252 1437 ntBASIC9.42□□□□□ -0.9
Nphp4P59240 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC9.42□□□□□ -0.9
Nphp4P59240 Gm14745-201ENSMUST00000118480 1096 ntBASIC9.42□□□□□ -0.9
Nphp4P59240 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Nphp4P59240 Gm26570-201ENSMUST00000180672 342 ntBASIC9.42□□□□□ -0.9
Nphp4P59240 Gm27299-201ENSMUST00000184593 103 ntBASIC9.42□□□□□ -0.9
Nphp4P59240 Gm37689-201ENSMUST00000193139 275 ntBASIC9.42□□□□□ -0.9
Nphp4P59240 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC9.42□□□□□ -0.9
Nphp4P59240 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC9.42□□□□□ -0.9
Nphp4P59240 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC9.42□□□□□ -0.9
Nphp4P59240 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC9.42□□□□□ -0.9
Nphp4P59240 Gm45626-201ENSMUST00000210093 361 ntBASIC9.42□□□□□ -0.9
Nphp4P59240 Gm18620-201ENSMUST00000222295 324 ntBASIC9.42□□□□□ -0.9
Nphp4P59240 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Nphp4P59240 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC9.42□□□□□ -0.9
Nphp4P59240 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Nphp4P59240 Ctnnd1-219ENSMUST00000111693 6255 ntAPPRIS ALT1 TSL 5 BASIC9.42□□□□□ -0.9
Nphp4P59240 Meis2-205ENSMUST00000110907 3718 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Nphp4P59240 AC153143.2-201ENSMUST00000220999 1804 ntBASIC9.42□□□□□ -0.9
Nphp4P59240 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC9.42□□□□□ -0.9
Nphp4P59240 Mcm10-201ENSMUST00000027980 3494 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Nphp4P59240 9330158H04Rik-206ENSMUST00000161161 3103 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Nphp4P59240 Depdc5-205ENSMUST00000120902 5195 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Nphp4P59240 Tanc1-208ENSMUST00000139863 7246 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Nphp4P59240 AC158986.1-201ENSMUST00000228391 3455 ntBASIC9.42□□□□□ -0.9
Nphp4P59240 Birc2-204ENSMUST00000190341 3331 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Nphp4P59240 Gm44996-201ENSMUST00000208787 2980 ntBASIC9.41□□□□□ -0.9
Nphp4P59240 Gm44553-201ENSMUST00000206316 2037 ntBASIC9.41□□□□□ -0.9
Nphp4P59240 Ryr1-208ENSMUST00000214374 15300 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Nphp4P59240 Arfgef1-203ENSMUST00000131556 3424 ntTSL 5 BASIC9.41□□□□□ -0.9
Nphp4P59240 Vmn1r213-204ENSMUST00000228758 5975 ntAPPRIS P2 BASIC9.41□□□□□ -0.9
Nphp4P59240 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Nphp4P59240 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC9.41□□□□□ -0.9
Nphp4P59240 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC9.41□□□□□ -0.9
Nphp4P59240 Gm5793-201ENSMUST00000119393 630 ntBASIC9.41□□□□□ -0.9
Nphp4P59240 Gm15164-201ENSMUST00000122203 271 ntBASIC9.41□□□□□ -0.9
Nphp4P59240 Gm23426-201ENSMUST00000122483 318 ntBASIC9.41□□□□□ -0.9
Nphp4P59240 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC9.41□□□□□ -0.9
Nphp4P59240 Gm22523-201ENSMUST00000158696 100 ntBASIC9.41□□□□□ -0.9
Nphp4P59240 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Nphp4P59240 Gm30498-201ENSMUST00000204033 615 ntTSL 5 BASIC9.41□□□□□ -0.9
Nphp4P59240 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC9.41□□□□□ -0.9
Nphp4P59240 Olfr602-ps1-202ENSMUST00000218213 1169 ntTSL 5 BASIC9.41□□□□□ -0.9
Nphp4P59240 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Nphp4P59240 AC107663.1-201ENSMUST00000224257 468 ntBASIC9.41□□□□□ -0.9
Nphp4P59240 AC116596.2-203ENSMUST00000227345 731 ntBASIC9.41□□□□□ -0.9
Nphp4P59240 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Nphp4P59240 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Nphp4P59240 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Nphp4P59240 AC130831.1-201ENSMUST00000224546 1474 ntBASIC9.41□□□□□ -0.9
Nphp4P59240 Gm43221-201ENSMUST00000197612 2071 ntBASIC9.41□□□□□ -0.9
Nphp4P59240 Gm42490-201ENSMUST00000198595 2064 ntBASIC9.41□□□□□ -0.9
Nphp4P59240 Cep290-210ENSMUST00000220346 8211 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Nphp4P59240 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Nphp4P59240 A330058E17Rik-201ENSMUST00000200757 3890 ntBASIC9.41□□□□□ -0.9
Nphp4P59240 Cyp1a1-201ENSMUST00000034865 2621 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Nphp4P59240 1110002J07Rik-201ENSMUST00000181710 2229 ntTSL 5 BASIC9.41□□□□□ -0.9
Nphp4P59240 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC9.41□□□□□ -0.9
Nphp4P59240 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC9.41□□□□□ -0.9
Nphp4P59240 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC9.41□□□□□ -0.9
Nphp4P59240 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Nphp4P59240 Daam1-202ENSMUST00000221317 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms