Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm6866-201ENSMUST00000188559 2549 ntBASIC6.81□□□□□ -1.32
Sox3P53784 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC6.81□□□□□ -1.32
Sox3P53784 Olfr1183-202ENSMUST00000213115 8258 ntTSL 5 BASIC6.81□□□□□ -1.32
Sox3P53784 Ptgfr-202ENSMUST00000106126 1535 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Sox3P53784 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox3P53784 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox3P53784 Gm10388-201ENSMUST00000205001 2936 ntBASIC6.8□□□□□ -1.32
Sox3P53784 Sec24c-202ENSMUST00000223751 4196 ntBASIC6.8□□□□□ -1.32
Sox3P53784 A530058O07Rik-201ENSMUST00000222059 3364 ntBASIC6.8□□□□□ -1.32
Sox3P53784 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Sox3P53784 AC153143.1-201ENSMUST00000222966 1340 ntBASIC6.8□□□□□ -1.32
Sox3P53784 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Sox3P53784 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Sox3P53784 AC139758.3-201ENSMUST00000226853 2704 ntBASIC6.8□□□□□ -1.32
Sox3P53784 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Sox3P53784 Dtna-202ENSMUST00000115832 6295 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox3P53784 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC6.8□□□□□ -1.32
Sox3P53784 Fndc3b-204ENSMUST00000195008 6886 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox3P53784 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Sox3P53784 Gm36930-201ENSMUST00000195431 2376 ntBASIC6.8□□□□□ -1.32
Sox3P53784 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC6.8□□□□□ -1.32
Sox3P53784 Ogfod1-203ENSMUST00000109556 5310 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox3P53784 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox3P53784 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC6.8□□□□□ -1.32
Sox3P53784 Gm14664-201ENSMUST00000142919 437 ntTSL 3 BASIC6.8□□□□□ -1.32
Sox3P53784 Gm3326-201ENSMUST00000164656 1043 ntBASIC6.8□□□□□ -1.32
Sox3P53784 Gm23450-201ENSMUST00000178285 91 ntBASIC6.8□□□□□ -1.32
Sox3P53784 Mir7072-201ENSMUST00000184542 60 ntBASIC6.8□□□□□ -1.32
Sox3P53784 Gm43022-201ENSMUST00000197067 4268 ntBASIC6.8□□□□□ -1.32
Sox3P53784 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC6.8□□□□□ -1.32
Sox3P53784 Gm45216-201ENSMUST00000205547 600 ntTSL 3 BASIC6.8□□□□□ -1.32
Sox3P53784 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Sox3P53784 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox3P53784 Gm4668-201ENSMUST00000214742 943 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Sox3P53784 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC6.8□□□□□ -1.32
Sox3P53784 Gm19217-201ENSMUST00000218238 328 ntBASIC6.8□□□□□ -1.32
Sox3P53784 1810014B01Rik-204ENSMUST00000218536 204 ntBASIC6.8□□□□□ -1.32
Sox3P53784 Gm3800-201ENSMUST00000221086 554 ntBASIC6.8□□□□□ -1.32
Sox3P53784 Gm46379-201ENSMUST00000222551 265 ntBASIC6.8□□□□□ -1.32
Sox3P53784 AC158988.1-201ENSMUST00000226731 2624 ntBASIC6.8□□□□□ -1.32
Sox3P53784 AC159002.2-201ENSMUST00000228843 4874 ntBASIC6.8□□□□□ -1.32
Sox3P53784 CT009550.2-201ENSMUST00000228851 399 ntBASIC6.8□□□□□ -1.32
Sox3P53784 Skint10-202ENSMUST00000068851 493 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Sox3P53784 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox3P53784 Vmn1r198-201ENSMUST00000091733 903 ntAPPRIS P2 BASIC6.8□□□□□ -1.32
Sox3P53784 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC6.8□□□□□ -1.32
Sox3P53784 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Sox3P53784 4931403G20Rik-201ENSMUST00000180861 1699 ntTSL 5 BASIC6.8□□□□□ -1.32
Sox3P53784 Olfr266-203ENSMUST00000216610 1520 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Sox3P53784 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC6.8□□□□□ -1.32
Sox3P53784 Gm20275-201ENSMUST00000215963 1387 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Sox3P53784 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox3P53784 Myo1h-205ENSMUST00000169347 3545 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Sox3P53784 Prkaa1-201ENSMUST00000051186 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox3P53784 AC156636.1-201ENSMUST00000218639 2229 ntBASIC6.8□□□□□ -1.32
Sox3P53784 Ogdh-203ENSMUST00000093350 4075 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Sox3P53784 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox3P53784 Olfr93-203ENSMUST00000219235 2929 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Sox3P53784 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Sox3P53784 Gm44185-201ENSMUST00000204539 3307 ntBASIC6.79□□□□□ -1.32
Sox3P53784 Gm43750-201ENSMUST00000199027 2493 ntBASIC6.79□□□□□ -1.32
Sox3P53784 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
Sox3P53784 Pabpc4l-202ENSMUST00000192793 5252 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
Sox3P53784 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Sox3P53784 Gm3139-201ENSMUST00000178330 1446 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Sox3P53784 Gm3183-201ENSMUST00000180076 1446 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Sox3P53784 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC6.79□□□□□ -1.32
Sox3P53784 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Sox3P53784 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC6.79□□□□□ -1.32
Sox3P53784 Gm12634-201ENSMUST00000122157 992 ntBASIC6.79□□□□□ -1.32
Sox3P53784 Gm11895-201ENSMUST00000122165 467 ntBASIC6.79□□□□□ -1.32
Sox3P53784 Gm15392-201ENSMUST00000152863 778 ntTSL 3 BASIC6.79□□□□□ -1.32
Sox3P53784 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Sox3P53784 Rsl24d1-204ENSMUST00000169399 841 ntTSL 3 BASIC6.79□□□□□ -1.32
Sox3P53784 Gm5445-201ENSMUST00000180224 480 ntBASIC6.79□□□□□ -1.32
Sox3P53784 Gm9423-201ENSMUST00000183173 997 ntBASIC6.79□□□□□ -1.32
Sox3P53784 Gm10136-201ENSMUST00000183196 435 ntBASIC6.79□□□□□ -1.32
Sox3P53784 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC6.79□□□□□ -1.32
Sox3P53784 Gm4860-201ENSMUST00000200368 454 ntBASIC6.79□□□□□ -1.32
Sox3P53784 Gm19065-201ENSMUST00000203269 788 ntTSL 5 BASIC6.79□□□□□ -1.32
Sox3P53784 Gm20670-201ENSMUST00000206468 338 ntTSL 3 BASIC6.79□□□□□ -1.32
Sox3P53784 Gm45478-201ENSMUST00000209472 211 ntBASIC6.79□□□□□ -1.32
Sox3P53784 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC6.79□□□□□ -1.32
Sox3P53784 Gm8058-201ENSMUST00000217247 587 ntBASIC6.79□□□□□ -1.32
Sox3P53784 Olfr602-ps1-202ENSMUST00000218213 1169 ntTSL 5 BASIC6.79□□□□□ -1.32
Sox3P53784 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Sox3P53784 Olfr683-201ENSMUST00000061284 960 ntBASIC6.79□□□□□ -1.32
Sox3P53784 Rnase4-201ENSMUST00000022428 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Sox3P53784 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Sox3P53784 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Sox3P53784 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Sox3P53784 Gm14976-201ENSMUST00000117055 1394 ntBASIC6.79□□□□□ -1.32
Sox3P53784 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Sox3P53784 Ttc17-201ENSMUST00000055081 3163 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Sox3P53784 Gm43488-201ENSMUST00000198874 2504 ntBASIC6.79□□□□□ -1.32
Sox3P53784 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Sox3P53784 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC6.79□□□□□ -1.32
Sox3P53784 Gm37940-201ENSMUST00000194243 3251 ntBASIC6.79□□□□□ -1.32
Sox3P53784 4930524O08Rik-201ENSMUST00000183387 1451 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Sox3P53784 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC6.79□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms