Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Aph1c-201ENSMUST00000057261 715 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Shmt1P50431 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Shmt1P50431 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC7.55□□□□□ -1.2
Shmt1P50431 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Shmt1P50431 Rpl31-ps9-201ENSMUST00000086596 378 ntBASIC7.55□□□□□ -1.2
Shmt1P50431 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Shmt1P50431 Luzp4-201ENSMUST00000101185 2023 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
Shmt1P50431 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Shmt1P50431 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Shmt1P50431 Gm37953-201ENSMUST00000195293 1884 ntBASIC7.55□□□□□ -1.2
Shmt1P50431 Olfr480-202ENSMUST00000217653 1876 ntAPPRIS P1 TSL 3 BASIC7.55□□□□□ -1.2
Shmt1P50431 Rtel1-201ENSMUST00000048608 4135 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Shmt1P50431 Gm45902-201ENSMUST00000124331 4314 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Shmt1P50431 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC7.55□□□□□ -1.2
Shmt1P50431 Gm45464-201ENSMUST00000210728 2844 ntTSL 5 BASIC7.55□□□□□ -1.2
Shmt1P50431 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Shmt1P50431 Gm44916-201ENSMUST00000208664 2194 ntBASIC7.54□□□□□ -1.2
Shmt1P50431 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Shmt1P50431 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Shmt1P50431 Gdi2-209ENSMUST00000223396 4303 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Shmt1P50431 Mcm10-201ENSMUST00000027980 3494 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Shmt1P50431 Odf2-204ENSMUST00000113756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Shmt1P50431 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Shmt1P50431 Gm20541-201ENSMUST00000173035 1406 ntBASIC7.54□□□□□ -1.2
Shmt1P50431 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Shmt1P50431 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC7.54□□□□□ -1.2
Shmt1P50431 Cntn5-205ENSMUST00000179049 2682 ntTSL 5 BASIC7.54□□□□□ -1.2
Shmt1P50431 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
Shmt1P50431 Gm37534-201ENSMUST00000194483 5222 ntBASIC7.54□□□□□ -1.2
Shmt1P50431 Cphx1-204ENSMUST00000184016 1649 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Shmt1P50431 Trav6-2-201ENSMUST00000103573 338 ntAPPRIS ALT2 BASIC7.54□□□□□ -1.2
Shmt1P50431 Gm25379-201ENSMUST00000104338 114 ntBASIC7.54□□□□□ -1.2
Shmt1P50431 Gm25344-201ENSMUST00000104503 132 ntBASIC7.54□□□□□ -1.2
Shmt1P50431 Gm9439-201ENSMUST00000119554 973 ntBASIC7.54□□□□□ -1.2
Shmt1P50431 Gm15719-201ENSMUST00000120619 635 ntBASIC7.54□□□□□ -1.2
Shmt1P50431 Gm7746-201ENSMUST00000120966 503 ntBASIC7.54□□□□□ -1.2
Shmt1P50431 Gm12001-201ENSMUST00000121727 913 ntBASIC7.54□□□□□ -1.2
Shmt1P50431 Gm24228-201ENSMUST00000158829 129 ntBASIC7.54□□□□□ -1.2
Shmt1P50431 Arpp19-204ENSMUST00000167885 540 ntTSL 3 BASIC7.54□□□□□ -1.2
Shmt1P50431 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Shmt1P50431 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC7.54□□□□□ -1.2
Shmt1P50431 Gm26455-201ENSMUST00000175300 92 ntBASIC7.54□□□□□ -1.2
Shmt1P50431 Trav6d-5-201ENSMUST00000180687 338 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Shmt1P50431 Rpl31-ps25-201ENSMUST00000181557 379 ntBASIC7.54□□□□□ -1.2
Shmt1P50431 Mir6241-201ENSMUST00000184225 103 ntBASIC7.54□□□□□ -1.2
Shmt1P50431 1700121L03Rik-201ENSMUST00000187796 704 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Shmt1P50431 Gm29343-201ENSMUST00000187887 842 ntTSL 5 BASIC7.54□□□□□ -1.2
Shmt1P50431 Gm42640-201ENSMUST00000199792 1195 ntBASIC7.54□□□□□ -1.2
Shmt1P50431 Gm42883-201ENSMUST00000202594 222 ntBASIC7.54□□□□□ -1.2
Shmt1P50431 Gm19269-201ENSMUST00000211401 804 ntBASIC7.54□□□□□ -1.2
Shmt1P50431 AC110816.1-201ENSMUST00000218559 980 ntBASIC7.54□□□□□ -1.2
Shmt1P50431 AC121542.2-201ENSMUST00000227529 400 ntBASIC7.54□□□□□ -1.2
Shmt1P50431 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Shmt1P50431 Olfr1265-201ENSMUST00000080311 930 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Shmt1P50431 Gm23734-201ENSMUST00000083753 109 ntBASIC7.54□□□□□ -1.2
Shmt1P50431 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Shmt1P50431 Gm38155-201ENSMUST00000192285 2763 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Shmt1P50431 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Shmt1P50431 Akt3-203ENSMUST00000111160 4735 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Shmt1P50431 Wdfy4-201ENSMUST00000061753 9681 ntAPPRIS P2 TSL 5 BASIC7.54□□□□□ -1.2
Shmt1P50431 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC7.54□□□□□ -1.2
Shmt1P50431 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Shmt1P50431 Ank3-207ENSMUST00000181974 3751 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Shmt1P50431 Chrnb3-201ENSMUST00000060943 4589 ntAPPRIS P4 TSL 1 (best) BASIC7.54□□□□□ -1.2
Shmt1P50431 Cyp1a1-201ENSMUST00000034865 2621 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Shmt1P50431 Pcdh19-203ENSMUST00000167944 8407 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
Shmt1P50431 Gm6786-201ENSMUST00000203165 1915 ntBASIC7.54□□□□□ -1.2
Shmt1P50431 Phactr2-204ENSMUST00000105546 2808 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
Shmt1P50431 Heatr1-201ENSMUST00000059270 6780 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Shmt1P50431 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Shmt1P50431 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Shmt1P50431 Gm15448-201ENSMUST00000094911 1557 ntTSL 5 BASIC7.54□□□□□ -1.2
Shmt1P50431 Lars-201ENSMUST00000097590 3856 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Shmt1P50431 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Shmt1P50431 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Shmt1P50431 March1-204ENSMUST00000110253 2748 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Shmt1P50431 Hdac9-205ENSMUST00000209902 7940 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
Shmt1P50431 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Shmt1P50431 Gm26744-201ENSMUST00000181834 1731 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Shmt1P50431 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC7.53□□□□□ -1.2
Shmt1P50431 Bdnf-209ENSMUST00000111050 3965 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Shmt1P50431 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Shmt1P50431 Ogfod1-203ENSMUST00000109556 5310 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Shmt1P50431 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Shmt1P50431 Ighv1-31-201ENSMUST00000103511 294 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Shmt1P50431 Ighv1-37-201ENSMUST00000103514 348 ntAPPRIS ALT2 BASIC7.53□□□□□ -1.2
Shmt1P50431 Ighv1-42-201ENSMUST00000103516 294 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Shmt1P50431 Ighv1-43-201ENSMUST00000103517 294 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Shmt1P50431 Ighv1-66-201ENSMUST00000103537 399 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Shmt1P50431 Ighv1-75-201ENSMUST00000103544 373 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Shmt1P50431 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
Shmt1P50431 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Shmt1P50431 Gm13423-201ENSMUST00000117205 888 ntBASIC7.53□□□□□ -1.2
Shmt1P50431 Gm14000-201ENSMUST00000118670 233 ntBASIC7.53□□□□□ -1.2
Shmt1P50431 Gm11233-201ENSMUST00000122357 634 ntBASIC7.53□□□□□ -1.2
Shmt1P50431 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Shmt1P50431 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC7.53□□□□□ -1.2
Shmt1P50431 Gm10130-201ENSMUST00000133235 303 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Shmt1P50431 Gm15123-201ENSMUST00000138988 339 ntTSL 3 BASIC7.53□□□□□ -1.2
Shmt1P50431 Gm12414-201ENSMUST00000150794 494 ntTSL 5 BASIC7.53□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms