Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 AC167192.4-201ENSMUST00000224087 993 ntBASIC8.87□□□□□ -0.99
Rfx1P48377 AC161877.2-201ENSMUST00000226248 545 ntBASIC8.87□□□□□ -0.99
Rfx1P48377 Ssbp1-201ENSMUST00000031971 1063 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Rfx1P48377 Klrk1-201ENSMUST00000032252 1270 ntAPPRIS P4 TSL 1 (best) BASIC8.87□□□□□ -0.99
Rfx1P48377 Tmem225-201ENSMUST00000046333 993 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Rfx1P48377 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC8.87□□□□□ -0.99
Rfx1P48377 Olfr466-201ENSMUST00000058907 927 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Rfx1P48377 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Rfx1P48377 Olfr1276-201ENSMUST00000073322 939 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Rfx1P48377 Gm9761-201ENSMUST00000075650 492 ntBASIC8.87□□□□□ -0.99
Rfx1P48377 Olfr304-201ENSMUST00000077210 1002 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Rfx1P48377 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Rfx1P48377 Gm8882-201ENSMUST00000080849 1240 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Rfx1P48377 Olfr901-202ENSMUST00000216502 2639 ntAPPRIS P1 TSL 3 BASIC8.87□□□□□ -0.99
Rfx1P48377 4833427F10Rik-201ENSMUST00000172874 1475 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Rfx1P48377 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Rfx1P48377 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
Rfx1P48377 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Rfx1P48377 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Rfx1P48377 Gm37090-201ENSMUST00000195694 4105 ntBASIC8.87□□□□□ -0.99
Rfx1P48377 Unc13b-216ENSMUST00000207708 6574 ntTSL 5 BASIC8.87□□□□□ -0.99
Rfx1P48377 Fam60a-211ENSMUST00000204435 2785 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Rfx1P48377 Olfr212-203ENSMUST00000220134 2349 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Rfx1P48377 Olfr1278-205ENSMUST00000215210 6901 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Rfx1P48377 Tex52-202ENSMUST00000130785 1424 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Rfx1P48377 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Rfx1P48377 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
Rfx1P48377 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Rfx1P48377 Gm28379-202ENSMUST00000187676 2896 ntBASIC8.87□□□□□ -0.99
Rfx1P48377 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Rfx1P48377 Cpeb4-202ENSMUST00000109412 6303 ntAPPRIS ALT1 TSL 5 BASIC8.86□□□□□ -0.99
Rfx1P48377 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Rfx1P48377 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Rfx1P48377 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Rfx1P48377 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Rfx1P48377 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Rfx1P48377 Med12-201ENSMUST00000087948 6809 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Rfx1P48377 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC8.86□□□□□ -0.99
Rfx1P48377 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Rfx1P48377 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Rfx1P48377 Trim75-201ENSMUST00000095295 3273 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Rfx1P48377 BC085271-201ENSMUST00000191852 1487 ntBASIC8.86□□□□□ -0.99
Rfx1P48377 Gjc3-201ENSMUST00000077119 4002 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Rfx1P48377 Gm23192-201ENSMUST00000102434 96 ntBASIC8.86□□□□□ -0.99
Rfx1P48377 Olfr800-201ENSMUST00000104903 940 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Rfx1P48377 Sult2a7-201ENSMUST00000108524 897 ntAPPRIS P2 TSL 5 BASIC8.86□□□□□ -0.99
Rfx1P48377 Gm15220-201ENSMUST00000120730 379 ntBASIC8.86□□□□□ -0.99
Rfx1P48377 Wdr61-205ENSMUST00000130368 1162 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Rfx1P48377 Bcas1os2-201ENSMUST00000131931 1174 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Rfx1P48377 Pabpn1-203ENSMUST00000139985 903 ntAPPRIS ALT2 TSL 2 BASIC8.86□□□□□ -0.99
Rfx1P48377 Gm8813-201ENSMUST00000155930 595 ntBASIC8.86□□□□□ -0.99
Rfx1P48377 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Rfx1P48377 Gm18416-201ENSMUST00000175635 1003 ntBASIC8.86□□□□□ -0.99
Rfx1P48377 Gm26269-201ENSMUST00000180144 126 ntBASIC8.86□□□□□ -0.99
Rfx1P48377 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Rfx1P48377 Gm29439-201ENSMUST00000189996 509 ntTSL 3 BASIC8.86□□□□□ -0.99
Rfx1P48377 C430002N11Rik-204ENSMUST00000190054 443 ntTSL 3 BASIC8.86□□□□□ -0.99
Rfx1P48377 Gm37866-201ENSMUST00000191950 696 ntBASIC8.86□□□□□ -0.99
Rfx1P48377 Gm37800-201ENSMUST00000192129 664 ntTSL 5 BASIC8.86□□□□□ -0.99
Rfx1P48377 Gm37371-201ENSMUST00000194837 392 ntBASIC8.86□□□□□ -0.99
Rfx1P48377 Gm31520-201ENSMUST00000203048 733 ntBASIC8.86□□□□□ -0.99
Rfx1P48377 9530078K11Rik-201ENSMUST00000208883 694 ntBASIC8.86□□□□□ -0.99
Rfx1P48377 Sult2a7-204ENSMUST00000211740 942 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Rfx1P48377 2310003N18Rik-201ENSMUST00000215655 458 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Rfx1P48377 Gm19987-201ENSMUST00000216339 499 ntBASIC8.86□□□□□ -0.99
Rfx1P48377 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC8.86□□□□□ -0.99
Rfx1P48377 Gm2099-201ENSMUST00000220979 412 ntBASIC8.86□□□□□ -0.99
Rfx1P48377 Gm35514-201ENSMUST00000221615 352 ntTSL 5 BASIC8.86□□□□□ -0.99
Rfx1P48377 AC158981.3-201ENSMUST00000226844 1024 ntBASIC8.86□□□□□ -0.99
Rfx1P48377 Rasgrf1-201ENSMUST00000034909 853 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Rfx1P48377 Wdr61-201ENSMUST00000051822 1187 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Rfx1P48377 1700028K03Rik-201ENSMUST00000058921 797 ntAPPRIS P3 TSL 2 BASIC8.86□□□□□ -0.99
Rfx1P48377 Olfr768-201ENSMUST00000063031 939 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Rfx1P48377 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Rfx1P48377 Olfr675-201ENSMUST00000073102 942 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Rfx1P48377 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC8.86□□□□□ -0.99
Rfx1P48377 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Rfx1P48377 Gm37786-201ENSMUST00000191714 3225 ntBASIC8.86□□□□□ -0.99
Rfx1P48377 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC8.86□□□□□ -0.99
Rfx1P48377 Gm44228-201ENSMUST00000204888 2026 ntBASIC8.86□□□□□ -0.99
Rfx1P48377 Ptprg-202ENSMUST00000119888 2787 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Rfx1P48377 Gm15083-201ENSMUST00000138670 1413 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Rfx1P48377 Pitpnc1-201ENSMUST00000040380 5478 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Rfx1P48377 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Rfx1P48377 Pramef12-201ENSMUST00000030326 2460 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Rfx1P48377 1700031F05Rik-201ENSMUST00000048061 1361 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Rfx1P48377 0610037L13Rik-212ENSMUST00000135454 2997 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Rfx1P48377 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Rfx1P48377 Gm38288-201ENSMUST00000195330 1320 ntBASIC8.85□□□□□ -0.99
Rfx1P48377 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Rfx1P48377 Ttll4-202ENSMUST00000113678 3762 ntTSL 5 BASIC8.85□□□□□ -0.99
Rfx1P48377 Fndc3b-204ENSMUST00000195008 6886 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Rfx1P48377 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Rfx1P48377 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Rfx1P48377 Zfp667-201ENSMUST00000086327 3672 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Rfx1P48377 Gm5702-201ENSMUST00000185629 2469 ntBASIC8.85□□□□□ -0.99
Rfx1P48377 Gm16221-201ENSMUST00000117331 393 ntBASIC8.85□□□□□ -0.99
Rfx1P48377 Olfr1292-ps1-201ENSMUST00000118137 939 ntBASIC8.85□□□□□ -0.99
Rfx1P48377 Gm13915-201ENSMUST00000119314 931 ntBASIC8.85□□□□□ -0.99
Rfx1P48377 Gm13683-201ENSMUST00000119497 1076 ntBASIC8.85□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms