Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Traf1P39428 AC116476.1-201ENSMUST00000226274 2318 ntBASIC8.25□□□□□ -1.09
Traf1P39428 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC8.25□□□□□ -1.09
Traf1P39428 Nol8-205ENSMUST00000222197 4368 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Traf1P39428 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Traf1P39428 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Traf1P39428 Etv1-210ENSMUST00000161980 1939 ntTSL 5 BASIC8.25□□□□□ -1.09
Traf1P39428 AC154522.1-201ENSMUST00000224647 1903 ntBASIC8.25□□□□□ -1.09
Traf1P39428 Gm44723-201ENSMUST00000207369 4000 ntBASIC8.25□□□□□ -1.09
Traf1P39428 Map2-205ENSMUST00000114015 5440 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Traf1P39428 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Traf1P39428 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Traf1P39428 Zfp934-208ENSMUST00000222429 1653 ntTSL 3 BASIC8.24□□□□□ -1.09
Traf1P39428 Abcc12-203ENSMUST00000131423 4893 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Traf1P39428 Olfr48-202ENSMUST00000214428 3848 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Traf1P39428 Gm42898-201ENSMUST00000200370 3073 ntBASIC8.24□□□□□ -1.09
Traf1P39428 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Traf1P39428 Gm6101-201ENSMUST00000195384 1867 ntBASIC8.24□□□□□ -1.09
Traf1P39428 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Traf1P39428 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Traf1P39428 Vwa3a-201ENSMUST00000033180 4575 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Traf1P39428 Gm26876-201ENSMUST00000180875 2387 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Traf1P39428 Adgrl3-206ENSMUST00000118034 4947 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Traf1P39428 Gm26417-201ENSMUST00000104274 135 ntBASIC8.24□□□□□ -1.09
Traf1P39428 Olfr26-201ENSMUST00000104874 931 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Traf1P39428 Klhl10-202ENSMUST00000107395 932 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Traf1P39428 Sult2a7-201ENSMUST00000108524 897 ntAPPRIS P2 TSL 5 BASIC8.24□□□□□ -1.09
Traf1P39428 Gm11903-201ENSMUST00000118958 727 ntBASIC8.24□□□□□ -1.09
Traf1P39428 Gm5578-201ENSMUST00000121490 1236 ntBASIC8.24□□□□□ -1.09
Traf1P39428 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC8.24□□□□□ -1.09
Traf1P39428 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC8.24□□□□□ -1.09
Traf1P39428 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Traf1P39428 Gm17022-201ENSMUST00000166415 922 ntBASIC8.24□□□□□ -1.09
Traf1P39428 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Traf1P39428 Rpl31-ps25-201ENSMUST00000181557 379 ntBASIC8.24□□□□□ -1.09
Traf1P39428 Gm27014-201ENSMUST00000182658 937 ntBASIC8.24□□□□□ -1.09
Traf1P39428 Gm27178-201ENSMUST00000184962 340 ntBASIC8.24□□□□□ -1.09
Traf1P39428 Gm43595-201ENSMUST00000196464 1071 ntBASIC8.24□□□□□ -1.09
Traf1P39428 Gm43656-201ENSMUST00000197882 434 ntBASIC8.24□□□□□ -1.09
Traf1P39428 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Traf1P39428 Gm43928-201ENSMUST00000203737 409 ntBASIC8.24□□□□□ -1.09
Traf1P39428 Sult2a7-204ENSMUST00000211740 942 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Traf1P39428 Smim15-203ENSMUST00000224361 830 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Traf1P39428 AC187103.4-201ENSMUST00000225399 300 ntBASIC8.24□□□□□ -1.09
Traf1P39428 AC152394.1-201ENSMUST00000227360 1086 ntBASIC8.24□□□□□ -1.09
Traf1P39428 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Traf1P39428 Olfr1265-201ENSMUST00000080311 930 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Traf1P39428 Gm23054-201ENSMUST00000082804 162 ntBASIC8.24□□□□□ -1.09
Traf1P39428 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Traf1P39428 Rftn2-201ENSMUST00000027121 3677 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Traf1P39428 Gm44021-201ENSMUST00000203055 3516 ntBASIC8.24□□□□□ -1.09
Traf1P39428 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Traf1P39428 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Traf1P39428 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Traf1P39428 AC120347.1-201ENSMUST00000223326 1639 ntBASIC8.24□□□□□ -1.09
Traf1P39428 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Traf1P39428 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC8.24□□□□□ -1.09
Traf1P39428 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Traf1P39428 Gm45657-201ENSMUST00000211318 1349 ntBASIC8.24□□□□□ -1.09
Traf1P39428 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Traf1P39428 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC8.24□□□□□ -1.09
Traf1P39428 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Traf1P39428 Dock2-201ENSMUST00000093193 6409 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Traf1P39428 Vmn1r90-203ENSMUST00000226510 6674 ntAPPRIS ALT2 BASIC8.23□□□□□ -1.09
Traf1P39428 Hmg20a-201ENSMUST00000034879 3778 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Traf1P39428 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Traf1P39428 Gm37772-201ENSMUST00000191635 1394 ntBASIC8.23□□□□□ -1.09
Traf1P39428 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC8.23□□□□□ -1.09
Traf1P39428 AC122769.1-201ENSMUST00000226930 1714 ntBASIC8.23□□□□□ -1.09
Traf1P39428 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC8.23□□□□□ -1.09
Traf1P39428 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Traf1P39428 Gm37080-201ENSMUST00000194804 2404 ntBASIC8.23□□□□□ -1.09
Traf1P39428 Ttc17-201ENSMUST00000055081 3163 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Traf1P39428 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Traf1P39428 Pik3c2g-212ENSMUST00000190962 1774 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Traf1P39428 Heatr1-201ENSMUST00000059270 6780 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Traf1P39428 Olfr212-203ENSMUST00000220134 2349 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Traf1P39428 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Traf1P39428 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Traf1P39428 Gm13732-201ENSMUST00000117753 535 ntBASIC8.23□□□□□ -1.09
Traf1P39428 Gm13313-201ENSMUST00000118938 1084 ntBASIC8.23□□□□□ -1.09
Traf1P39428 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Traf1P39428 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC8.23□□□□□ -1.09
Traf1P39428 Gm22024-201ENSMUST00000122733 287 ntBASIC8.23□□□□□ -1.09
Traf1P39428 4930517O19Rik-201ENSMUST00000140320 603 ntTSL 5 BASIC8.23□□□□□ -1.09
Traf1P39428 Gm26183-201ENSMUST00000157685 139 ntBASIC8.23□□□□□ -1.09
Traf1P39428 Gm26025-201ENSMUST00000158655 271 ntBASIC8.23□□□□□ -1.09
Traf1P39428 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Traf1P39428 Sbp-202ENSMUST00000181985 920 ntAPPRIS P1 TSL 3 BASIC8.23□□□□□ -1.09
Traf1P39428 Gm34144-201ENSMUST00000197039 259 ntBASIC8.23□□□□□ -1.09
Traf1P39428 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC8.23□□□□□ -1.09
Traf1P39428 Gm8479-201ENSMUST00000203825 718 ntBASIC8.23□□□□□ -1.09
Traf1P39428 AC151904.5-201ENSMUST00000218975 549 ntBASIC8.23□□□□□ -1.09
Traf1P39428 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Traf1P39428 AC154380.1-201ENSMUST00000226804 720 ntBASIC8.23□□□□□ -1.09
Traf1P39428 CT009556.4-201ENSMUST00000227092 200 ntBASIC8.23□□□□□ -1.09
Traf1P39428 AC157572.1-201ENSMUST00000227187 825 ntBASIC8.23□□□□□ -1.09
Traf1P39428 Glycam1-204ENSMUST00000228895 641 ntBASIC8.23□□□□□ -1.09
Traf1P39428 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Traf1P39428 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms