Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Cdx1P18111 AC163631.1-201ENSMUST00000225041 598 ntBASIC5.77□□□□□ -1.49
Cdx1P18111 AC163667.1-201ENSMUST00000225201 1289 ntBASIC5.77□□□□□ -1.49
Cdx1P18111 AC157212.1-201ENSMUST00000228398 1075 ntBASIC5.77□□□□□ -1.49
Cdx1P18111 Mgat4d-201ENSMUST00000038692 1293 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Cdx1P18111 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Cdx1P18111 Rps6-ps1-201ENSMUST00000074205 750 ntBASIC5.77□□□□□ -1.49
Cdx1P18111 Olfr742-201ENSMUST00000089836 1120 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Cdx1P18111 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Cdx1P18111 Olfr1231-201ENSMUST00000099786 942 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Cdx1P18111 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Cdx1P18111 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
Cdx1P18111 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Cdx1P18111 4930579H20Rik-201ENSMUST00000187815 1516 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Cdx1P18111 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Cdx1P18111 Gm6767-201ENSMUST00000118650 1381 ntBASIC5.77□□□□□ -1.49
Cdx1P18111 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Cdx1P18111 Gm7562-201ENSMUST00000210502 2537 ntBASIC5.77□□□□□ -1.49
Cdx1P18111 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Cdx1P18111 Gm45762-201ENSMUST00000212863 2619 ntBASIC5.77□□□□□ -1.49
Cdx1P18111 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Cdx1P18111 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Cdx1P18111 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC5.76□□□□□ -1.49
Cdx1P18111 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Cdx1P18111 Gm37945-201ENSMUST00000192536 4367 ntBASIC5.76□□□□□ -1.49
Cdx1P18111 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Cdx1P18111 Ankrd66-201ENSMUST00000178772 1321 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Cdx1P18111 Kctd16-201ENSMUST00000091927 1349 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx1P18111 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx1P18111 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Cdx1P18111 Elovl2-201ENSMUST00000021793 3840 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx1P18111 Olfr671-202ENSMUST00000210963 3157 ntTSL 5 BASIC5.76□□□□□ -1.49
Cdx1P18111 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx1P18111 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx1P18111 Gm6866-201ENSMUST00000188559 2549 ntBASIC5.76□□□□□ -1.49
Cdx1P18111 Fam83b-202ENSMUST00000183437 3879 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx1P18111 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx1P18111 Il15ra-217ENSMUST00000148748 1542 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx1P18111 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx1P18111 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx1P18111 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx1P18111 Gm37968-201ENSMUST00000195131 3201 ntBASIC5.76□□□□□ -1.49
Cdx1P18111 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx1P18111 Gm24462-201ENSMUST00000102430 106 ntBASIC5.76□□□□□ -1.49
Cdx1P18111 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx1P18111 Rhox4g-201ENSMUST00000115166 979 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx1P18111 Gm12460-201ENSMUST00000117147 357 ntBASIC5.76□□□□□ -1.49
Cdx1P18111 Gm16407-201ENSMUST00000122134 567 ntBASIC5.76□□□□□ -1.49
Cdx1P18111 Gm16174-201ENSMUST00000137373 402 ntTSL 2 BASIC5.76□□□□□ -1.49
Cdx1P18111 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx1P18111 Serpina4-ps1-201ENSMUST00000166601 1287 ntBASIC5.76□□□□□ -1.49
Cdx1P18111 Svs5-201ENSMUST00000017148 628 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx1P18111 Gm23162-201ENSMUST00000175081 121 ntBASIC5.76□□□□□ -1.49
Cdx1P18111 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx1P18111 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx1P18111 Gm5300-201ENSMUST00000182201 1003 ntBASIC5.76□□□□□ -1.49
Cdx1P18111 Arhgap26-218ENSMUST00000187912 312 ntTSL 5 BASIC5.76□□□□□ -1.49
Cdx1P18111 Gm553-201ENSMUST00000189527 701 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx1P18111 Gm43160-201ENSMUST00000196453 421 ntBASIC5.76□□□□□ -1.49
Cdx1P18111 C920008G01Rik-201ENSMUST00000196756 380 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Cdx1P18111 Gm2762-203ENSMUST00000201658 1234 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx1P18111 Gm44764-202ENSMUST00000204912 671 ntTSL 3 BASIC5.76□□□□□ -1.49
Cdx1P18111 A930014E10Rik-201ENSMUST00000205115 546 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx1P18111 Gm4259-201ENSMUST00000206489 758 ntBASIC5.76□□□□□ -1.49
Cdx1P18111 Olfr1476-ps1-201ENSMUST00000208572 367 ntBASIC5.76□□□□□ -1.49
Cdx1P18111 Gm45388-202ENSMUST00000211101 815 ntTSL 5 BASIC5.76□□□□□ -1.49
Cdx1P18111 Akr1c12-201ENSMUST00000021632 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx1P18111 Gm7392-201ENSMUST00000217815 345 ntBASIC5.76□□□□□ -1.49
Cdx1P18111 RMST_1.1-203ENSMUST00000217866 775 ntTSL 3 BASIC5.76□□□□□ -1.49
Cdx1P18111 AC165349.2-201ENSMUST00000219097 426 ntBASIC5.76□□□□□ -1.49
Cdx1P18111 AC131654.1-201ENSMUST00000219675 745 ntBASIC5.76□□□□□ -1.49
Cdx1P18111 Gm19428-202ENSMUST00000220573 1038 ntTSL 5 BASIC5.76□□□□□ -1.49
Cdx1P18111 AC159205.1-201ENSMUST00000225513 1099 ntBASIC5.76□□□□□ -1.49
Cdx1P18111 AC132317.2-201ENSMUST00000227301 519 ntBASIC5.76□□□□□ -1.49
Cdx1P18111 CT009550.2-201ENSMUST00000228851 399 ntBASIC5.76□□□□□ -1.49
Cdx1P18111 Olfr49-201ENSMUST00000059996 1030 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Cdx1P18111 Rpl27a-ps1-201ENSMUST00000075382 448 ntBASIC5.76□□□□□ -1.49
Cdx1P18111 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC5.76□□□□□ -1.49
Cdx1P18111 4933406K04Rik-203ENSMUST00000135423 1391 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx1P18111 Gm17083-201ENSMUST00000165849 1366 ntBASIC5.76□□□□□ -1.49
Cdx1P18111 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Cdx1P18111 Gm43425-201ENSMUST00000201793 3291 ntBASIC5.76□□□□□ -1.49
Cdx1P18111 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx1P18111 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx1P18111 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx1P18111 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Cdx1P18111 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx1P18111 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Cdx1P18111 Scd3-201ENSMUST00000026220 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx1P18111 AC154406.1-201ENSMUST00000215220 2529 ntBASIC5.76□□□□□ -1.49
Cdx1P18111 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx1P18111 Pdgfd-203ENSMUST00000214892 2862 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx1P18111 Schip1-207ENSMUST00000182997 1557 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx1P18111 Gm28649-201ENSMUST00000189153 1581 ntBASIC5.76□□□□□ -1.49
Cdx1P18111 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx1P18111 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx1P18111 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Cdx1P18111 Gm37245-201ENSMUST00000195137 2713 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cdx1P18111 CT009734.1-201ENSMUST00000227657 1687 ntBASIC5.75□□□□□ -1.49
Cdx1P18111 Gm4927-201ENSMUST00000219548 1318 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms