Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Col1a1P11087 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Col1a1P11087 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC8.2□□□□□ -1.1
Col1a1P11087 Gm34263-202ENSMUST00000214353 303 ntTSL 5 BASIC8.2□□□□□ -1.1
Col1a1P11087 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC8.2□□□□□ -1.1
Col1a1P11087 Gm46203-201ENSMUST00000218130 478 ntBASIC8.2□□□□□ -1.1
Col1a1P11087 Gm2139-201ENSMUST00000222569 1075 ntBASIC8.2□□□□□ -1.1
Col1a1P11087 AC154834.1-201ENSMUST00000224697 358 ntBASIC8.2□□□□□ -1.1
Col1a1P11087 AC138765.3-201ENSMUST00000227981 423 ntBASIC8.2□□□□□ -1.1
Col1a1P11087 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Col1a1P11087 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Col1a1P11087 Bcat1-201ENSMUST00000032402 7833 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Col1a1P11087 Zc3h11a-201ENSMUST00000027736 4395 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Col1a1P11087 AC154597.1-201ENSMUST00000224095 2713 ntBASIC8.2□□□□□ -1.1
Col1a1P11087 Nt5c2-201ENSMUST00000086961 3745 ntTSL 5 BASIC8.2□□□□□ -1.1
Col1a1P11087 Olfr97-201ENSMUST00000073667 1555 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Col1a1P11087 Magea10-201ENSMUST00000088481 1821 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Col1a1P11087 Clasp1-218ENSMUST00000190571 7910 ntAPPRIS P5 TSL 5 BASIC8.2□□□□□ -1.1
Col1a1P11087 Ep400-204ENSMUST00000112436 10685 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Col1a1P11087 Ank3-247ENSMUST00000218680 5500 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Col1a1P11087 Sorbs1-202ENSMUST00000099467 2817 ntAPPRIS P4 TSL 5 BASIC8.2□□□□□ -1.1
Col1a1P11087 Helz2-202ENSMUST00000108831 10109 ntAPPRIS P2 TSL 5 BASIC8.2□□□□□ -1.1
Col1a1P11087 Pfkfb1-202ENSMUST00000112713 1872 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Col1a1P11087 Gm8844-201ENSMUST00000119460 2614 ntBASIC8.2□□□□□ -1.1
Col1a1P11087 Fblim1-201ENSMUST00000006381 3101 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Col1a1P11087 Olfr316-202ENSMUST00000215071 2719 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Col1a1P11087 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC8.2□□□□□ -1.1
Col1a1P11087 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC8.2□□□□□ -1.1
Col1a1P11087 Nr1h5-203ENSMUST00000196983 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Col1a1P11087 Arhgef3-202ENSMUST00000224981 3618 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Col1a1P11087 Marf1-201ENSMUST00000090300 7765 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Col1a1P11087 Myo6-202ENSMUST00000076140 7663 ntTSL 5 BASIC8.2□□□□□ -1.1
Col1a1P11087 Gm23426-201ENSMUST00000122483 318 ntBASIC8.19□□□□□ -1.1
Col1a1P11087 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Col1a1P11087 Gm17217-201ENSMUST00000166613 469 ntBASIC8.19□□□□□ -1.1
Col1a1P11087 Gm21392-201ENSMUST00000182950 972 ntBASIC8.19□□□□□ -1.1
Col1a1P11087 Gm28527-201ENSMUST00000185210 297 ntBASIC8.19□□□□□ -1.1
Col1a1P11087 Gm8241-201ENSMUST00000189286 816 ntBASIC8.19□□□□□ -1.1
Col1a1P11087 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC8.19□□□□□ -1.1
Col1a1P11087 Gm7769-201ENSMUST00000212900 933 ntBASIC8.19□□□□□ -1.1
Col1a1P11087 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Col1a1P11087 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Col1a1P11087 Sema6a-210ENSMUST00000156422 3291 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Col1a1P11087 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Col1a1P11087 Trim16-201ENSMUST00000055006 3906 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Col1a1P11087 Glod4-206ENSMUST00000169701 4203 ntTSL 2 BASIC8.19□□□□□ -1.1
Col1a1P11087 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Col1a1P11087 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC8.19□□□□□ -1.1
Col1a1P11087 Stxbp4-202ENSMUST00000107872 2529 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Col1a1P11087 Tcp10c-201ENSMUST00000097403 2528 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Col1a1P11087 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC8.19□□□□□ -1.1
Col1a1P11087 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
Col1a1P11087 AC155710.1-201ENSMUST00000219913 1353 ntBASIC8.19□□□□□ -1.1
Col1a1P11087 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC8.19□□□□□ -1.1
Col1a1P11087 Kif20a-201ENSMUST00000166044 3567 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Col1a1P11087 AC154612.1-202ENSMUST00000224806 1725 ntBASIC8.19□□□□□ -1.1
Col1a1P11087 Atr-201ENSMUST00000034980 8056 ntTSL 5 BASIC8.19□□□□□ -1.1
Col1a1P11087 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Col1a1P11087 Agtpbp1-206ENSMUST00000164215 4331 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Col1a1P11087 Clasp2-207ENSMUST00000214522 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Col1a1P11087 Gm43534-201ENSMUST00000197685 2853 ntBASIC8.19□□□□□ -1.1
Col1a1P11087 Zfp652-202ENSMUST00000107717 10433 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Col1a1P11087 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
Col1a1P11087 Clca3a2-201ENSMUST00000029929 3654 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Col1a1P11087 Ryr1-202ENSMUST00000179893 15358 ntAPPRIS P2 TSL 5 BASIC8.19□□□□□ -1.1
Col1a1P11087 Lama3-202ENSMUST00000188815 5551 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Col1a1P11087 Gm4342-201ENSMUST00000118982 367 ntBASIC8.19□□□□□ -1.1
Col1a1P11087 Gm4853-201ENSMUST00000119359 394 ntBASIC8.19□□□□□ -1.1
Col1a1P11087 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC8.19□□□□□ -1.1
Col1a1P11087 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Col1a1P11087 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC8.19□□□□□ -1.1
Col1a1P11087 Gm37328-201ENSMUST00000193191 640 ntBASIC8.19□□□□□ -1.1
Col1a1P11087 Gm37809-201ENSMUST00000195050 931 ntBASIC8.19□□□□□ -1.1
Col1a1P11087 Gm43576-201ENSMUST00000197937 871 ntBASIC8.19□□□□□ -1.1
Col1a1P11087 Gm7463-201ENSMUST00000201541 547 ntBASIC8.19□□□□□ -1.1
Col1a1P11087 Gm32983-201ENSMUST00000208500 505 ntBASIC8.19□□□□□ -1.1
Col1a1P11087 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC8.19□□□□□ -1.1
Col1a1P11087 Gm5831-201ENSMUST00000216016 1209 ntBASIC8.19□□□□□ -1.1
Col1a1P11087 Gm8058-201ENSMUST00000217247 587 ntBASIC8.19□□□□□ -1.1
Col1a1P11087 Gm18586-201ENSMUST00000217265 518 ntBASIC8.19□□□□□ -1.1
Col1a1P11087 AC154219.1-201ENSMUST00000220764 1262 ntBASIC8.19□□□□□ -1.1
Col1a1P11087 AC150661.1-201ENSMUST00000222563 495 ntBASIC8.19□□□□□ -1.1
Col1a1P11087 Vmn1r41-205ENSMUST00000227630 827 ntBASIC8.19□□□□□ -1.1
Col1a1P11087 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Col1a1P11087 Vmn1r199-202ENSMUST00000227685 5713 ntAPPRIS P2 BASIC8.19□□□□□ -1.1
Col1a1P11087 CT025619.3-201ENSMUST00000216299 3267 ntBASIC8.18□□□□□ -1.1
Col1a1P11087 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC8.18□□□□□ -1.1
Col1a1P11087 Ulk4-209ENSMUST00000171923 4103 ntAPPRIS P2 TSL 5 BASIC8.18□□□□□ -1.1
Col1a1P11087 Pcsk2os1-201ENSMUST00000126735 4233 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Col1a1P11087 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
Col1a1P11087 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC8.18□□□□□ -1.1
Col1a1P11087 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Col1a1P11087 Garnl3-201ENSMUST00000049618 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Col1a1P11087 Polr1a-201ENSMUST00000055296 9216 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Col1a1P11087 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC8.18□□□□□ -1.1
Col1a1P11087 Armc2-203ENSMUST00000160262 4810 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Col1a1P11087 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Col1a1P11087 Gpbp1l1-202ENSMUST00000106475 2642 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Col1a1P11087 Lca5-201ENSMUST00000034791 4160 ntAPPRIS P4 TSL 1 (best) BASIC8.18□□□□□ -1.1
Col1a1P11087 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms