Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm42728-201ENSMUST00000202644 1552 ntBASIC6.66□□□□□ -1.34
Hoxd3P09027 Tmx2-201ENSMUST00000053664 1977 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Hoxd3P09027 Abca1-201ENSMUST00000030010 10262 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Hoxd3P09027 Vwde-202ENSMUST00000203074 5626 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Hoxd3P09027 Slc5a6-205ENSMUST00000202520 3248 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Hoxd3P09027 Slc5a6-201ENSMUST00000080431 3218 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Hoxd3P09027 AC164437.4-202ENSMUST00000228794 2413 ntBASIC6.66□□□□□ -1.34
Hoxd3P09027 Zc3h12c-201ENSMUST00000165519 6133 ntAPPRIS P2 TSL 5 BASIC6.66□□□□□ -1.34
Hoxd3P09027 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Hoxd3P09027 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Hoxd3P09027 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Hoxd3P09027 Synj2-205ENSMUST00000115786 2531 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Hoxd3P09027 Pcdh15-236ENSMUST00000193174 5936 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Hoxd3P09027 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Hoxd3P09027 Gm7803-201ENSMUST00000117176 1015 ntBASIC6.66□□□□□ -1.34
Hoxd3P09027 Gm13878-201ENSMUST00000117986 577 ntBASIC6.66□□□□□ -1.34
Hoxd3P09027 Gm15464-201ENSMUST00000118718 431 ntBASIC6.66□□□□□ -1.34
Hoxd3P09027 Rpl36-ps1-201ENSMUST00000119508 303 ntBASIC6.66□□□□□ -1.34
Hoxd3P09027 Gm11763-201ENSMUST00000119964 312 ntBASIC6.66□□□□□ -1.34
Hoxd3P09027 Gm14425-201ENSMUST00000121240 606 ntBASIC6.66□□□□□ -1.34
Hoxd3P09027 Gm22342-201ENSMUST00000122647 298 ntBASIC6.66□□□□□ -1.34
Hoxd3P09027 Gm14260-201ENSMUST00000125121 260 ntTSL 5 BASIC6.66□□□□□ -1.34
Hoxd3P09027 Olfr405-ps1-202ENSMUST00000127098 711 ntTSL 3 BASIC6.66□□□□□ -1.34
Hoxd3P09027 BC021767-202ENSMUST00000136988 905 ntTSL 3 BASIC6.66□□□□□ -1.34
Hoxd3P09027 Gm14349-201ENSMUST00000137155 902 ntBASIC6.66□□□□□ -1.34
Hoxd3P09027 1700003M07Rik-201ENSMUST00000139884 541 ntTSL 2 BASIC6.66□□□□□ -1.34
Hoxd3P09027 Gm16116-201ENSMUST00000159472 430 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Hoxd3P09027 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Hoxd3P09027 Gm20918-201ENSMUST00000179629 684 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Hoxd3P09027 Gm23003-201ENSMUST00000179948 107 ntBASIC6.66□□□□□ -1.34
Hoxd3P09027 Gm19402-201ENSMUST00000180297 801 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Hoxd3P09027 Slc35a5-205ENSMUST00000181177 865 ntTSL 3 BASIC6.66□□□□□ -1.34
Hoxd3P09027 Gm26703-202ENSMUST00000181506 2982 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Hoxd3P09027 Mirg-204ENSMUST00000182185 3822 ntTSL 5 BASIC6.66□□□□□ -1.34
Hoxd3P09027 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC6.66□□□□□ -1.34
Hoxd3P09027 Gm3454-201ENSMUST00000185571 412 ntBASIC6.66□□□□□ -1.34
Hoxd3P09027 1700049E22Rik-201ENSMUST00000187986 507 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Hoxd3P09027 Gm28508-201ENSMUST00000188016 696 ntBASIC6.66□□□□□ -1.34
Hoxd3P09027 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Hoxd3P09027 Gm29490-201ENSMUST00000190923 342 ntBASIC6.66□□□□□ -1.34
Hoxd3P09027 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC6.66□□□□□ -1.34
Hoxd3P09027 Gm37223-202ENSMUST00000193592 490 ntTSL 3 BASIC6.66□□□□□ -1.34
Hoxd3P09027 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC6.66□□□□□ -1.34
Hoxd3P09027 Gm42538-201ENSMUST00000196233 566 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Hoxd3P09027 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Hoxd3P09027 Igkv15-97-201ENSMUST00000197637 339 ntBASIC6.66□□□□□ -1.34
Hoxd3P09027 Ckb-ps1-201ENSMUST00000199192 1127 ntBASIC6.66□□□□□ -1.34
Hoxd3P09027 Ighv8-16-201ENSMUST00000199258 294 ntBASIC6.66□□□□□ -1.34
Hoxd3P09027 Gm42861-201ENSMUST00000199596 634 ntBASIC6.66□□□□□ -1.34
Hoxd3P09027 Gm9245-201ENSMUST00000200528 983 ntBASIC6.66□□□□□ -1.34
Hoxd3P09027 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Hoxd3P09027 Gm17995-201ENSMUST00000209266 530 ntBASIC6.66□□□□□ -1.34
Hoxd3P09027 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC6.66□□□□□ -1.34
Hoxd3P09027 AC139579.1-201ENSMUST00000214560 606 ntTSL 3 BASIC6.66□□□□□ -1.34
Hoxd3P09027 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC6.66□□□□□ -1.34
Hoxd3P09027 Olfr603-202ENSMUST00000218246 1021 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Hoxd3P09027 Gm32220-201ENSMUST00000218420 298 ntBASIC6.66□□□□□ -1.34
Hoxd3P09027 AC101984.1-201ENSMUST00000219639 402 ntBASIC6.66□□□□□ -1.34
Hoxd3P09027 Gm19047-201ENSMUST00000220922 1099 ntBASIC6.66□□□□□ -1.34
Hoxd3P09027 Gm2139-201ENSMUST00000222569 1075 ntBASIC6.66□□□□□ -1.34
Hoxd3P09027 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC6.66□□□□□ -1.34
Hoxd3P09027 Gm10054-201ENSMUST00000223362 431 ntBASIC6.66□□□□□ -1.34
Hoxd3P09027 AC122295.1-201ENSMUST00000223476 388 ntBASIC6.66□□□□□ -1.34
Hoxd3P09027 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC6.66□□□□□ -1.34
Hoxd3P09027 CT573085.1-201ENSMUST00000224279 1197 ntBASIC6.66□□□□□ -1.34
Hoxd3P09027 AC154687.1-201ENSMUST00000224875 677 ntBASIC6.66□□□□□ -1.34
Hoxd3P09027 AC154806.5-204ENSMUST00000228900 867 ntBASIC6.66□□□□□ -1.34
Hoxd3P09027 Myl12a-201ENSMUST00000024846 980 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
Hoxd3P09027 Krtap7-1-201ENSMUST00000056118 620 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Hoxd3P09027 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Hoxd3P09027 Gm10024-201ENSMUST00000075421 553 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Hoxd3P09027 Olfr1418-201ENSMUST00000079875 1072 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Hoxd3P09027 Rab25-201ENSMUST00000008745 1081 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Hoxd3P09027 Olfr1270-201ENSMUST00000099754 1018 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Hoxd3P09027 Zic4-201ENSMUST00000066384 3891 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Hoxd3P09027 Cpt1a-201ENSMUST00000025835 4300 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Hoxd3P09027 D3Ertd751e-203ENSMUST00000108065 3452 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
Hoxd3P09027 2600014E21Rik-201ENSMUST00000186411 4805 ntTSL 5 BASIC6.66□□□□□ -1.34
Hoxd3P09027 Trim39-201ENSMUST00000042717 3085 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Hoxd3P09027 Gm11239-201ENSMUST00000171348 1322 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Hoxd3P09027 Gm11237-201ENSMUST00000178319 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Hoxd3P09027 Gm11236-201ENSMUST00000180092 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Hoxd3P09027 Gm428-201ENSMUST00000084475 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Hoxd3P09027 Gm11238-201ENSMUST00000084479 1323 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Hoxd3P09027 Gm8126-201ENSMUST00000169587 1764 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
Hoxd3P09027 Sycp1-202ENSMUST00000196988 3189 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Hoxd3P09027 Cd101-202ENSMUST00000167086 3223 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Hoxd3P09027 Col28a1-201ENSMUST00000115537 4230 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Hoxd3P09027 Olfr170-202ENSMUST00000206562 1417 ntAPPRIS ALT1 TSL 5 BASIC6.66□□□□□ -1.34
Hoxd3P09027 Sprr2a2-201ENSMUST00000071805 2867 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Hoxd3P09027 Cenpq-201ENSMUST00000087114 1942 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Hoxd3P09027 Gm40999-201ENSMUST00000222586 3387 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Hoxd3P09027 D830044D21Rik-201ENSMUST00000143315 3897 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Hoxd3P09027 9330121K16Rik-201ENSMUST00000211464 3886 ntBASIC6.66□□□□□ -1.34
Hoxd3P09027 Stat2-202ENSMUST00000105238 4397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Hoxd3P09027 Ace2-201ENSMUST00000073973 3422 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Hoxd3P09027 Ttc39c-204ENSMUST00000169401 1950 ntAPPRIS ALT1 TSL 5 BASIC6.66□□□□□ -1.34
Hoxd3P09027 Gm37124-201ENSMUST00000192140 1992 ntBASIC6.66□□□□□ -1.34
Hoxd3P09027 Gm40841-202ENSMUST00000222823 3989 ntTSL 5 BASIC6.66□□□□□ -1.34
Hoxd3P09027 Gm26896-201ENSMUST00000180482 2526 ntTSL 5 BASIC6.66□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 308.2 ms