Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Cast-210ENSMUST00000223126 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
P06344 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
P06344 Gm20597-201ENSMUST00000218774 5486 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
P06344 Tcf20-201ENSMUST00000048966 7224 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
P06344 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC6.27□□□□□ -1.4
P06344 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
P06344 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
P06344 AC139758.3-201ENSMUST00000226853 2704 ntBASIC6.27□□□□□ -1.41
P06344 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC6.27□□□□□ -1.41
P06344 CT009604.1-201ENSMUST00000223900 1328 ntBASIC6.27□□□□□ -1.41
P06344 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
P06344 Dip2b-203ENSMUST00000108971 8127 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
P06344 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
P06344 Gm45174-201ENSMUST00000208884 3065 ntBASIC6.27□□□□□ -1.41
P06344 Vwa3a-201ENSMUST00000033180 4575 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
P06344 Gm8212-201ENSMUST00000166350 1404 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
P06344 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
P06344 Gm26512-201ENSMUST00000181874 3042 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
P06344 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
P06344 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC6.27□□□□□ -1.41
P06344 Olfr521-202ENSMUST00000219663 2277 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
P06344 Olfr521-203ENSMUST00000220001 2254 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
P06344 Hdac9-205ENSMUST00000209902 7940 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
P06344 4930579H20Rik-201ENSMUST00000187815 1516 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
P06344 Gm40893-201ENSMUST00000220507 1508 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
P06344 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
P06344 Olfr1160-202ENSMUST00000215457 6042 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
P06344 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
P06344 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
P06344 Gm23485-201ENSMUST00000104181 155 ntBASIC6.27□□□□□ -1.41
P06344 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC6.27□□□□□ -1.41
P06344 Gm14631-201ENSMUST00000119067 594 ntBASIC6.27□□□□□ -1.41
P06344 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC6.27□□□□□ -1.41
P06344 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC6.27□□□□□ -1.41
P06344 Gm11689-201ENSMUST00000120766 302 ntBASIC6.27□□□□□ -1.41
P06344 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
P06344 Gm22604-201ENSMUST00000157604 311 ntBASIC6.27□□□□□ -1.41
P06344 Gm16113-201ENSMUST00000159629 372 ntBASIC6.27□□□□□ -1.41
P06344 Gm17212-201ENSMUST00000166666 259 ntBASIC6.27□□□□□ -1.41
P06344 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC6.27□□□□□ -1.41
P06344 Rpl31-ps25-201ENSMUST00000181557 379 ntBASIC6.27□□□□□ -1.41
P06344 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC6.27□□□□□ -1.41
P06344 Gm27014-201ENSMUST00000182658 937 ntBASIC6.27□□□□□ -1.41
P06344 9930111H07Rik-201ENSMUST00000187270 821 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
P06344 Rpl31-206ENSMUST00000195123 356 ntTSL 3 BASIC6.27□□□□□ -1.41
P06344 Gm43725-201ENSMUST00000200122 369 ntBASIC6.27□□□□□ -1.41
P06344 Fabp7-201ENSMUST00000020024 804 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
P06344 Gm34333-201ENSMUST00000200363 669 ntTSL 3 BASIC6.27□□□□□ -1.41
P06344 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC6.27□□□□□ -1.41
P06344 Gm44943-201ENSMUST00000207254 300 ntBASIC6.27□□□□□ -1.41
P06344 Olfr1010-201ENSMUST00000216831 1270 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
P06344 AC108401.2-201ENSMUST00000220316 346 ntTSL 3 BASIC6.27□□□□□ -1.41
P06344 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
P06344 AC154515.3-201ENSMUST00000225081 1159 ntBASIC6.27□□□□□ -1.41
P06344 AC154380.1-201ENSMUST00000226804 720 ntBASIC6.27□□□□□ -1.41
P06344 AC121542.2-201ENSMUST00000227529 400 ntBASIC6.27□□□□□ -1.41
P06344 Eps15-201ENSMUST00000030281 2980 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
P06344 Olfr109-201ENSMUST00000031086 945 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
P06344 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
P06344 Olfr535-201ENSMUST00000074897 991 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
P06344 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC6.27□□□□□ -1.41
P06344 Olfr1265-201ENSMUST00000080311 930 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
P06344 Gm6887-201ENSMUST00000080945 482 ntBASIC6.27□□□□□ -1.41
P06344 Tnfrsf22-202ENSMUST00000084396 564 ntAPPRIS P3 TSL 2 BASIC6.27□□□□□ -1.41
P06344 Gm10160-201ENSMUST00000085094 201 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
P06344 Rpl31-ps9-201ENSMUST00000086596 378 ntBASIC6.27□□□□□ -1.41
P06344 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
P06344 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
P06344 Gm5702-201ENSMUST00000185629 2469 ntBASIC6.27□□□□□ -1.41
P06344 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
P06344 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
P06344 Gm26575-201ENSMUST00000181714 2232 ntBASIC6.27□□□□□ -1.41
P06344 AC154747.4-203ENSMUST00000225893 1384 ntBASIC6.27□□□□□ -1.41
P06344 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
P06344 Tcf12-221ENSMUST00000185117 3986 ntAPPRIS ALT1 TSL 5 BASIC6.27□□□□□ -1.41
P06344 Gm34294-201ENSMUST00000191912 4263 ntBASIC6.27□□□□□ -1.41
P06344 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
P06344 Gm37423-201ENSMUST00000194246 3342 ntBASIC6.27□□□□□ -1.41
P06344 Gm38009-201ENSMUST00000194884 3341 ntBASIC6.27□□□□□ -1.41
P06344 Olfr702-201ENSMUST00000080899 1348 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
P06344 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
P06344 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
P06344 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
P06344 Gm10475-201ENSMUST00000084713 1796 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
P06344 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
P06344 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
P06344 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
P06344 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
P06344 Gm37786-201ENSMUST00000191714 3225 ntBASIC6.26□□□□□ -1.41
P06344 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
P06344 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
P06344 Olfr66-202ENSMUST00000216303 3080 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
P06344 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
P06344 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
P06344 Gm26981-201ENSMUST00000182453 3169 ntTSL 5 BASIC6.26□□□□□ -1.41
P06344 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
P06344 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC6.26□□□□□ -1.41
P06344 Gm15081-201ENSMUST00000119794 844 ntBASIC6.26□□□□□ -1.41
P06344 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
P06344 Gm23762-201ENSMUST00000158348 106 ntBASIC6.26□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms