Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Ank1-215ENSMUST00000173248 7100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Col4a1P02463 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Col4a1P02463 Map2-207ENSMUST00000114018 5303 ntAPPRIS P3 TSL 5 BASIC8.41□□□□□ -1.06
Col4a1P02463 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Col4a1P02463 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Col4a1P02463 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Col4a1P02463 Kif9-202ENSMUST00000084952 2713 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Col4a1P02463 Slc6a18-203ENSMUST00000109680 4052 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Col4a1P02463 Dusp16-201ENSMUST00000100857 5104 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
Col4a1P02463 Gm12447-201ENSMUST00000119110 470 ntBASIC8.41□□□□□ -1.06
Col4a1P02463 Gm11504-201ENSMUST00000120211 173 ntBASIC8.41□□□□□ -1.06
Col4a1P02463 Gm15712-201ENSMUST00000120369 1156 ntBASIC8.41□□□□□ -1.06
Col4a1P02463 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Col4a1P02463 Gm10177-201ENSMUST00000160052 444 ntBASIC8.41□□□□□ -1.06
Col4a1P02463 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC8.41□□□□□ -1.06
Col4a1P02463 Gm9658-201ENSMUST00000182757 1012 ntBASIC8.41□□□□□ -1.06
Col4a1P02463 Gm29234-201ENSMUST00000187452 1262 ntBASIC8.41□□□□□ -1.06
Col4a1P02463 Gm42443-201ENSMUST00000198084 1155 ntBASIC8.41□□□□□ -1.06
Col4a1P02463 Gm45448-201ENSMUST00000211739 209 ntBASIC8.41□□□□□ -1.06
Col4a1P02463 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC8.41□□□□□ -1.06
Col4a1P02463 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC8.41□□□□□ -1.06
Col4a1P02463 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC8.41□□□□□ -1.06
Col4a1P02463 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC8.41□□□□□ -1.06
Col4a1P02463 AC125409.2-201ENSMUST00000221888 2158 ntBASIC8.41□□□□□ -1.06
Col4a1P02463 AC154795.1-201ENSMUST00000225611 364 ntBASIC8.41□□□□□ -1.06
Col4a1P02463 Olfr691-201ENSMUST00000057528 969 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Col4a1P02463 Gm25587-201ENSMUST00000082498 166 ntBASIC8.41□□□□□ -1.06
Col4a1P02463 Gm25515-201ENSMUST00000083858 157 ntBASIC8.41□□□□□ -1.06
Col4a1P02463 Nms-201ENSMUST00000088029 1001 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Col4a1P02463 Bmpr1b-201ENSMUST00000029948 5349 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Col4a1P02463 Gm31049-201ENSMUST00000201516 1302 ntBASIC8.41□□□□□ -1.06
Col4a1P02463 AC115760.1-201ENSMUST00000225160 1327 ntBASIC8.41□□□□□ -1.06
Col4a1P02463 Ttc38-203ENSMUST00000146088 3749 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Col4a1P02463 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Col4a1P02463 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Col4a1P02463 Bmx-202ENSMUST00000112265 3005 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Col4a1P02463 Peg3-201ENSMUST00000051209 8694 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Col4a1P02463 Rabgap1-201ENSMUST00000061179 4967 ntAPPRIS P4 TSL 1 (best) BASIC8.4□□□□□ -1.06
Col4a1P02463 Son-202ENSMUST00000114037 8399 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Col4a1P02463 Gm12630-201ENSMUST00000121575 784 ntBASIC8.4□□□□□ -1.06
Col4a1P02463 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Col4a1P02463 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC8.4□□□□□ -1.06
Col4a1P02463 Ms4a2-202ENSMUST00000164792 1010 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Col4a1P02463 Gm22655-201ENSMUST00000174949 96 ntBASIC8.4□□□□□ -1.06
Col4a1P02463 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC8.4□□□□□ -1.06
Col4a1P02463 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC8.4□□□□□ -1.06
Col4a1P02463 Gm27152-201ENSMUST00000183828 99 ntBASIC8.4□□□□□ -1.06
Col4a1P02463 Gm5119-201ENSMUST00000215858 634 ntBASIC8.4□□□□□ -1.06
Col4a1P02463 AC154219.1-201ENSMUST00000220764 1262 ntBASIC8.4□□□□□ -1.06
Col4a1P02463 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC8.4□□□□□ -1.06
Col4a1P02463 Vmn1r83-201ENSMUST00000086229 996 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Col4a1P02463 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Col4a1P02463 Greb1l-201ENSMUST00000048977 8414 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Col4a1P02463 E230020D15Rik-201ENSMUST00000208097 5899 ntBASIC8.4□□□□□ -1.06
Col4a1P02463 Mrpl19-201ENSMUST00000032124 5000 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Col4a1P02463 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC8.4□□□□□ -1.06
Col4a1P02463 Srl-202ENSMUST00000090500 3698 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Col4a1P02463 March6-201ENSMUST00000090227 6260 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Col4a1P02463 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Col4a1P02463 Gm43876-201ENSMUST00000203831 3229 ntBASIC8.4□□□□□ -1.06
Col4a1P02463 Gm973-201ENSMUST00000114243 3595 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Col4a1P02463 Ints2-201ENSMUST00000018212 5906 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Col4a1P02463 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Col4a1P02463 Olfr224-204ENSMUST00000217009 2098 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Col4a1P02463 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Col4a1P02463 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC8.4□□□□□ -1.06
Col4a1P02463 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Col4a1P02463 Gm21846-201ENSMUST00000179257 3073 ntBASIC8.4□□□□□ -1.06
Col4a1P02463 U2surp-209ENSMUST00000217176 3111 ntTSL 5 BASIC8.4□□□□□ -1.07
Col4a1P02463 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Col4a1P02463 Cmtr1-201ENSMUST00000024816 6380 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Col4a1P02463 Gm26422-201ENSMUST00000104276 132 ntBASIC8.4□□□□□ -1.07
Col4a1P02463 Gm15621-201ENSMUST00000119162 364 ntBASIC8.4□□□□□ -1.07
Col4a1P02463 Rps29-ps-201ENSMUST00000122083 172 ntBASIC8.4□□□□□ -1.07
Col4a1P02463 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC8.4□□□□□ -1.07
Col4a1P02463 Gm9064-201ENSMUST00000163579 566 ntBASIC8.4□□□□□ -1.07
Col4a1P02463 Gm5260-201ENSMUST00000186157 949 ntBASIC8.4□□□□□ -1.07
Col4a1P02463 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.07
Col4a1P02463 Gm5694-201ENSMUST00000195648 641 ntBASIC8.4□□□□□ -1.07
Col4a1P02463 Gm43351-201ENSMUST00000198737 326 ntTSL 5 BASIC8.4□□□□□ -1.07
Col4a1P02463 Clec2g-206ENSMUST00000204259 893 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Col4a1P02463 Gm39078-201ENSMUST00000207973 704 ntTSL 5 BASIC8.4□□□□□ -1.07
Col4a1P02463 Gm45739-201ENSMUST00000213094 388 ntBASIC8.4□□□□□ -1.07
Col4a1P02463 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC8.4□□□□□ -1.07
Col4a1P02463 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Col4a1P02463 Mef2c-222ENSMUST00000199019 4441 ntTSL 5 BASIC8.4□□□□□ -1.07
Col4a1P02463 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Col4a1P02463 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Col4a1P02463 Adar-202ENSMUST00000098924 5909 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Col4a1P02463 Dysf-203ENSMUST00000113818 6571 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Col4a1P02463 Slc5a9-202ENSMUST00000102720 3393 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Col4a1P02463 Mfap1b-201ENSMUST00000056732 3362 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Col4a1P02463 Cacna1c-214ENSMUST00000188106 6462 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Col4a1P02463 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Col4a1P02463 Gm42685-201ENSMUST00000200378 2390 ntBASIC8.39□□□□□ -1.07
Col4a1P02463 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
Col4a1P02463 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC8.39□□□□□ -1.07
Col4a1P02463 Gm3555-201ENSMUST00000160287 1395 ntBASIC8.39□□□□□ -1.07
Col4a1P02463 Rbm6-ps1-201ENSMUST00000186192 2870 ntBASIC8.39□□□□□ -1.07
Col4a1P02463 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms