Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Cdip1-201ENSMUST00000004173 3953 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Col6a3E9PWQ3 Gm6474-201ENSMUST00000223250 699 ntBASIC6.71□□□□□ -1.33
Col6a3E9PWQ3 Olfr1336-201ENSMUST00000056120 945 ntAPPRIS P1 BASIC6.71□□□□□ -1.33
Col6a3E9PWQ3 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col6a3E9PWQ3 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col6a3E9PWQ3 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col6a3E9PWQ3 Mir124a-1hg-201ENSMUST00000180610 4103 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Col6a3E9PWQ3 Olfr972-202ENSMUST00000215303 1641 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
Col6a3E9PWQ3 Gm28403-201ENSMUST00000188743 2710 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Col6a3E9PWQ3 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC6.71□□□□□ -1.34
Col6a3E9PWQ3 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Col6a3E9PWQ3 AC158686.1-201ENSMUST00000218068 2332 ntBASIC6.71□□□□□ -1.34
Col6a3E9PWQ3 Ankrd49-206ENSMUST00000216372 2679 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col6a3E9PWQ3 AC139750.1-201ENSMUST00000223962 1300 ntBASIC6.71□□□□□ -1.34
Col6a3E9PWQ3 Grik2-205ENSMUST00000218598 3245 ntTSL 5 BASIC6.71□□□□□ -1.34
Col6a3E9PWQ3 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col6a3E9PWQ3 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Col6a3E9PWQ3 Nbr1-203ENSMUST00000103099 4789 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col6a3E9PWQ3 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC6.71□□□□□ -1.34
Col6a3E9PWQ3 Gm24905-201ENSMUST00000158129 104 ntBASIC6.71□□□□□ -1.34
Col6a3E9PWQ3 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col6a3E9PWQ3 Zg16-202ENSMUST00000205424 682 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
Col6a3E9PWQ3 AC164424.3-201ENSMUST00000220809 148 ntBASIC6.71□□□□□ -1.34
Col6a3E9PWQ3 AC166358.8-201ENSMUST00000223288 105 ntBASIC6.71□□□□□ -1.34
Col6a3E9PWQ3 AC124739.1-201ENSMUST00000223433 148 ntBASIC6.71□□□□□ -1.34
Col6a3E9PWQ3 AC168056.2-201ENSMUST00000223591 269 ntBASIC6.71□□□□□ -1.34
Col6a3E9PWQ3 AC134860.6-201ENSMUST00000226038 285 ntBASIC6.71□□□□□ -1.34
Col6a3E9PWQ3 Olfr994-201ENSMUST00000099925 945 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Col6a3E9PWQ3 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col6a3E9PWQ3 Nme8-201ENSMUST00000039340 1704 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Col6a3E9PWQ3 Mr1-201ENSMUST00000027744 2512 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col6a3E9PWQ3 Idi2-201ENSMUST00000038598 2253 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col6a3E9PWQ3 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col6a3E9PWQ3 Zfp426-210ENSMUST00000167457 4262 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Col6a3E9PWQ3 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Col6a3E9PWQ3 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC6.71□□□□□ -1.34
Col6a3E9PWQ3 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Col6a3E9PWQ3 Gm12229-201ENSMUST00000120487 468 ntBASIC6.7□□□□□ -1.34
Col6a3E9PWQ3 Gm20223-201ENSMUST00000199932 805 ntBASIC6.7□□□□□ -1.34
Col6a3E9PWQ3 Gm9088-201ENSMUST00000220237 508 ntBASIC6.7□□□□□ -1.34
Col6a3E9PWQ3 Pgbd1-204ENSMUST00000148071 2600 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Col6a3E9PWQ3 Fto-204ENSMUST00000136802 3751 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Col6a3E9PWQ3 Naalad2-201ENSMUST00000001826 2831 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Col6a3E9PWQ3 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col6a3E9PWQ3 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Col6a3E9PWQ3 Ttc21b-201ENSMUST00000102718 4470 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col6a3E9PWQ3 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC6.7□□□□□ -1.34
Col6a3E9PWQ3 Mrgprx2-202ENSMUST00000186394 1930 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Col6a3E9PWQ3 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col6a3E9PWQ3 9430098F02Rik-201ENSMUST00000180832 2986 ntTSL 5 BASIC6.7□□□□□ -1.34
Col6a3E9PWQ3 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC6.7□□□□□ -1.34
Col6a3E9PWQ3 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col6a3E9PWQ3 Gtf3c2-210ENSMUST00000202639 4200 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Col6a3E9PWQ3 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Col6a3E9PWQ3 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Col6a3E9PWQ3 Mns1-201ENSMUST00000034746 5250 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col6a3E9PWQ3 Klf10-202ENSMUST00000226363 2917 ntBASIC6.7□□□□□ -1.34
Col6a3E9PWQ3 Mcm3ap-201ENSMUST00000170795 6427 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col6a3E9PWQ3 Ppfia1-202ENSMUST00000182226 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col6a3E9PWQ3 Syt2-201ENSMUST00000121990 6879 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col6a3E9PWQ3 Gm13821-201ENSMUST00000202029 3201 ntBASIC6.7□□□□□ -1.34
Col6a3E9PWQ3 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col6a3E9PWQ3 Egflam-202ENSMUST00000096494 4391 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col6a3E9PWQ3 Gm6150-202ENSMUST00000219888 2977 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Col6a3E9PWQ3 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC6.7□□□□□ -1.34
Col6a3E9PWQ3 Olfr523-202ENSMUST00000209314 3677 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Col6a3E9PWQ3 Gm12303-201ENSMUST00000119506 673 ntBASIC6.7□□□□□ -1.34
Col6a3E9PWQ3 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Col6a3E9PWQ3 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col6a3E9PWQ3 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC6.7□□□□□ -1.34
Col6a3E9PWQ3 Gm18969-201ENSMUST00000189423 730 ntBASIC6.7□□□□□ -1.34
Col6a3E9PWQ3 Gm37235-201ENSMUST00000195171 59 ntBASIC6.7□□□□□ -1.34
Col6a3E9PWQ3 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC6.7□□□□□ -1.34
Col6a3E9PWQ3 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC6.7□□□□□ -1.34
Col6a3E9PWQ3 Gm43456-201ENSMUST00000202519 457 ntBASIC6.7□□□□□ -1.34
Col6a3E9PWQ3 AC154806.5-204ENSMUST00000228900 867 ntBASIC6.7□□□□□ -1.34
Col6a3E9PWQ3 Gm44231-201ENSMUST00000204106 4075 ntBASIC6.7□□□□□ -1.34
Col6a3E9PWQ3 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col6a3E9PWQ3 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC6.7□□□□□ -1.34
Col6a3E9PWQ3 Aph1b-201ENSMUST00000034934 4910 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Col6a3E9PWQ3 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC6.7□□□□□ -1.34
Col6a3E9PWQ3 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col6a3E9PWQ3 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col6a3E9PWQ3 Ednrb-201ENSMUST00000022718 4107 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col6a3E9PWQ3 Ccdc175-201ENSMUST00000021494 2622 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Col6a3E9PWQ3 Tab3-201ENSMUST00000048250 6364 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col6a3E9PWQ3 Gm37685-201ENSMUST00000193507 2177 ntBASIC6.69□□□□□ -1.34
Col6a3E9PWQ3 Gm37150-201ENSMUST00000193900 2754 ntBASIC6.69□□□□□ -1.34
Col6a3E9PWQ3 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col6a3E9PWQ3 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC6.69□□□□□ -1.34
Col6a3E9PWQ3 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Col6a3E9PWQ3 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col6a3E9PWQ3 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Col6a3E9PWQ3 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC6.69□□□□□ -1.34
Col6a3E9PWQ3 Olfr126-203ENSMUST00000217487 1859 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Col6a3E9PWQ3 Gm13738-201ENSMUST00000122437 469 ntBASIC6.69□□□□□ -1.34
Col6a3E9PWQ3 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC6.69□□□□□ -1.34
Col6a3E9PWQ3 Gm25383-201ENSMUST00000157810 144 ntBASIC6.69□□□□□ -1.34
Col6a3E9PWQ3 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC6.69□□□□□ -1.34
Col6a3E9PWQ3 Gm5947-201ENSMUST00000179156 714 ntBASIC6.69□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 95.9 ms