Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 4931428L18Rik-201ENSMUST00000127775 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trim3Q9R1R2 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC6.66□□□□□ -1.34
Trim3Q9R1R2 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC6.66□□□□□ -1.34
Trim3Q9R1R2 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC6.66□□□□□ -1.34
Trim3Q9R1R2 Polr3g-204ENSMUST00000161920 733 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Trim3Q9R1R2 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Trim3Q9R1R2 1700025K24Rik-201ENSMUST00000190635 740 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Trim3Q9R1R2 Gm33370-201ENSMUST00000195935 489 ntTSL 2 BASIC6.66□□□□□ -1.34
Trim3Q9R1R2 Gm2762-203ENSMUST00000201658 1234 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Trim3Q9R1R2 Gm43950-201ENSMUST00000204767 996 ntTSL 3 BASIC6.66□□□□□ -1.34
Trim3Q9R1R2 Gm44590-201ENSMUST00000206161 391 ntBASIC6.66□□□□□ -1.34
Trim3Q9R1R2 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC6.66□□□□□ -1.34
Trim3Q9R1R2 Olfr1251-203ENSMUST00000214750 1040 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Trim3Q9R1R2 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC6.66□□□□□ -1.34
Trim3Q9R1R2 AC134606.1-201ENSMUST00000216324 721 ntTSL 3 BASIC6.66□□□□□ -1.34
Trim3Q9R1R2 Gm18112-201ENSMUST00000219862 1195 ntBASIC6.66□□□□□ -1.34
Trim3Q9R1R2 Gm19154-201ENSMUST00000223330 940 ntBASIC6.66□□□□□ -1.34
Trim3Q9R1R2 AC133598.2-201ENSMUST00000224302 624 ntBASIC6.66□□□□□ -1.34
Trim3Q9R1R2 CT025639.2-201ENSMUST00000224440 1220 ntBASIC6.66□□□□□ -1.34
Trim3Q9R1R2 AC172989.1-201ENSMUST00000226387 513 ntBASIC6.66□□□□□ -1.34
Trim3Q9R1R2 AC154692.1-202ENSMUST00000226632 1231 ntBASIC6.66□□□□□ -1.34
Trim3Q9R1R2 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trim3Q9R1R2 Olfr539-201ENSMUST00000078967 960 ntAPPRIS P2 BASIC6.66□□□□□ -1.34
Trim3Q9R1R2 Gm10247-201ENSMUST00000090395 333 ntBASIC6.66□□□□□ -1.34
Trim3Q9R1R2 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trim3Q9R1R2 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
Trim3Q9R1R2 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Trim3Q9R1R2 Adam28-203ENSMUST00000224039 2638 ntAPPRIS ALT2 BASIC6.66□□□□□ -1.34
Trim3Q9R1R2 Zbtb44-202ENSMUST00000167346 1308 ntTSL 3 BASIC6.66□□□□□ -1.34
Trim3Q9R1R2 Glrx-201ENSMUST00000022082 1345 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trim3Q9R1R2 AC122024.1-201ENSMUST00000219276 4850 ntBASIC6.66□□□□□ -1.34
Trim3Q9R1R2 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trim3Q9R1R2 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Trim3Q9R1R2 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trim3Q9R1R2 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trim3Q9R1R2 Gm38262-201ENSMUST00000194760 1382 ntBASIC6.66□□□□□ -1.34
Trim3Q9R1R2 Anks1b-201ENSMUST00000099364 1383 ntTSL 5 BASIC6.66□□□□□ -1.34
Trim3Q9R1R2 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trim3Q9R1R2 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC6.66□□□□□ -1.34
Trim3Q9R1R2 9230106D20Rik-201ENSMUST00000052806 1406 ntTSL 5 BASIC6.66□□□□□ -1.34
Trim3Q9R1R2 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trim3Q9R1R2 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Trim3Q9R1R2 AC154642.2-201ENSMUST00000223657 2485 ntBASIC6.66□□□□□ -1.34
Trim3Q9R1R2 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Trim3Q9R1R2 Gm26945-201ENSMUST00000183191 2011 ntBASIC6.66□□□□□ -1.34
Trim3Q9R1R2 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC6.66□□□□□ -1.34
Trim3Q9R1R2 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Trim3Q9R1R2 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Trim3Q9R1R2 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
Trim3Q9R1R2 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Trim3Q9R1R2 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
Trim3Q9R1R2 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Trim3Q9R1R2 Map2-205ENSMUST00000114015 5440 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Trim3Q9R1R2 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Trim3Q9R1R2 Gm25916-201ENSMUST00000104263 131 ntBASIC6.65□□□□□ -1.34
Trim3Q9R1R2 Uros-202ENSMUST00000106144 1045 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Trim3Q9R1R2 Gm11987-201ENSMUST00000118524 381 ntBASIC6.65□□□□□ -1.34
Trim3Q9R1R2 Gm11320-201ENSMUST00000119434 463 ntBASIC6.65□□□□□ -1.34
Trim3Q9R1R2 Gm5135-201ENSMUST00000121100 573 ntBASIC6.65□□□□□ -1.34
Trim3Q9R1R2 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC6.65□□□□□ -1.34
Trim3Q9R1R2 9530046B11Rik-201ENSMUST00000149413 1157 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Trim3Q9R1R2 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Trim3Q9R1R2 Gm25180-201ENSMUST00000157746 115 ntBASIC6.65□□□□□ -1.34
Trim3Q9R1R2 Gm22882-201ENSMUST00000157749 124 ntBASIC6.65□□□□□ -1.34
Trim3Q9R1R2 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.34
Trim3Q9R1R2 Gm27026-201ENSMUST00000183003 892 ntBASIC6.65□□□□□ -1.34
Trim3Q9R1R2 Gm6472-202ENSMUST00000187973 582 ntBASIC6.65□□□□□ -1.34
Trim3Q9R1R2 Scgb2b8-ps-201ENSMUST00000188661 327 ntBASIC6.65□□□□□ -1.34
Trim3Q9R1R2 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC6.65□□□□□ -1.34
Trim3Q9R1R2 9530018H14Rik-201ENSMUST00000192253 1243 ntBASIC6.65□□□□□ -1.34
Trim3Q9R1R2 Gm38337-201ENSMUST00000193986 599 ntBASIC6.65□□□□□ -1.34
Trim3Q9R1R2 Gm38170-201ENSMUST00000195404 816 ntBASIC6.65□□□□□ -1.34
Trim3Q9R1R2 Gm5717-201ENSMUST00000198243 1062 ntBASIC6.65□□□□□ -1.34
Trim3Q9R1R2 Gm21461-201ENSMUST00000200382 863 ntBASIC6.65□□□□□ -1.34
Trim3Q9R1R2 Gm42734-201ENSMUST00000201656 878 ntBASIC6.65□□□□□ -1.34
Trim3Q9R1R2 4933431C10Rik-201ENSMUST00000208973 1266 ntBASIC6.65□□□□□ -1.34
Trim3Q9R1R2 Gm19092-201ENSMUST00000209036 969 ntBASIC6.65□□□□□ -1.34
Trim3Q9R1R2 Gm45282-201ENSMUST00000209439 681 ntTSL 3 BASIC6.65□□□□□ -1.34
Trim3Q9R1R2 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC6.65□□□□□ -1.34
Trim3Q9R1R2 Gm30132-202ENSMUST00000212825 819 ntTSL 3 BASIC6.65□□□□□ -1.34
Trim3Q9R1R2 Gm35998-201ENSMUST00000212862 838 ntTSL 5 BASIC6.65□□□□□ -1.34
Trim3Q9R1R2 AC122428.4-201ENSMUST00000213494 589 ntTSL 3 BASIC6.65□□□□□ -1.34
Trim3Q9R1R2 AC164550.1-201ENSMUST00000217821 1066 ntBASIC6.65□□□□□ -1.34
Trim3Q9R1R2 Gm5374-202ENSMUST00000222910 314 ntBASIC6.65□□□□□ -1.34
Trim3Q9R1R2 AC159205.2-201ENSMUST00000223759 816 ntBASIC6.65□□□□□ -1.34
Trim3Q9R1R2 AV026068-229ENSMUST00000225516 595 ntBASIC6.65□□□□□ -1.34
Trim3Q9R1R2 AC117949.1-201ENSMUST00000225547 419 ntBASIC6.65□□□□□ -1.34
Trim3Q9R1R2 Klrk1-201ENSMUST00000032252 1270 ntAPPRIS P4 TSL 1 (best) BASIC6.65□□□□□ -1.34
Trim3Q9R1R2 Olfr1383-201ENSMUST00000077143 940 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Trim3Q9R1R2 Olfr1360-201ENSMUST00000079135 980 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Trim3Q9R1R2 Gm22504-201ENSMUST00000082963 139 ntBASIC6.65□□□□□ -1.34
Trim3Q9R1R2 Serpina1e-201ENSMUST00000085054 1295 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Trim3Q9R1R2 1700026J12Rik-201ENSMUST00000098226 1127 ntTSL 5 BASIC6.65□□□□□ -1.34
Trim3Q9R1R2 Vmn2r-ps159-202ENSMUST00000096792 2574 ntBASIC6.65□□□□□ -1.34
Trim3Q9R1R2 Gm44185-201ENSMUST00000204539 3307 ntBASIC6.65□□□□□ -1.35
Trim3Q9R1R2 Gm44231-201ENSMUST00000204106 4075 ntBASIC6.65□□□□□ -1.35
Trim3Q9R1R2 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Trim3Q9R1R2 Gm16506-201ENSMUST00000165553 1405 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Trim3Q9R1R2 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.35
Trim3Q9R1R2 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms