Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Trim42Q9D2H5 CT010453.1-201ENSMUST00000226795 2201 ntBASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Zscan18-203ENSMUST00000210650 3668 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Trim42Q9D2H5 AC103672.2-201ENSMUST00000228146 1687 ntBASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Gm37364-201ENSMUST00000192533 3920 ntBASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Gm14415-201ENSMUST00000118260 1578 ntBASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Gm44014-201ENSMUST00000205150 1509 ntBASIC7.88□□□□□ -1.15
Trim42Q9D2H5 AI429214-201ENSMUST00000098825 1930 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
Trim42Q9D2H5 Cks1brt-201ENSMUST00000076896 2301 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Trim42Q9D2H5 Hps5-203ENSMUST00000107654 4422 ntAPPRIS P3 TSL 5 BASIC7.87□□□□□ -1.15
Trim42Q9D2H5 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trim42Q9D2H5 Itk-201ENSMUST00000020664 4272 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trim42Q9D2H5 Elavl4-207ENSMUST00000106603 3761 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Trim42Q9D2H5 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trim42Q9D2H5 Cyp2c53-ps-202ENSMUST00000175960 1370 ntBASIC7.87□□□□□ -1.15
Trim42Q9D2H5 Hsd3b2-202ENSMUST00000107022 3695 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trim42Q9D2H5 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trim42Q9D2H5 Sec22a-201ENSMUST00000043521 3992 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trim42Q9D2H5 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trim42Q9D2H5 n-R5s1-201ENSMUST00000101925 119 ntBASIC7.87□□□□□ -1.15
Trim42Q9D2H5 Gm22426-201ENSMUST00000103811 96 ntBASIC7.87□□□□□ -1.15
Trim42Q9D2H5 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Trim42Q9D2H5 Churc1-202ENSMUST00000110399 535 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Trim42Q9D2H5 Gm12684-201ENSMUST00000118675 999 ntBASIC7.87□□□□□ -1.15
Trim42Q9D2H5 Gm12312-201ENSMUST00000120351 644 ntBASIC7.87□□□□□ -1.15
Trim42Q9D2H5 Dmrtc1a-203ENSMUST00000120808 1061 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Trim42Q9D2H5 Gm12180-201ENSMUST00000120905 661 ntBASIC7.87□□□□□ -1.15
Trim42Q9D2H5 Gm25780-201ENSMUST00000122528 253 ntBASIC7.87□□□□□ -1.15
Trim42Q9D2H5 Fam229b-206ENSMUST00000136546 592 ntAPPRIS P1 TSL 3 BASIC7.87□□□□□ -1.15
Trim42Q9D2H5 Gm6706-201ENSMUST00000145087 318 ntBASIC7.87□□□□□ -1.15
Trim42Q9D2H5 Gm15831-201ENSMUST00000156195 516 ntTSL 2 BASIC7.87□□□□□ -1.15
Trim42Q9D2H5 Gm17205-201ENSMUST00000168370 1207 ntBASIC7.87□□□□□ -1.15
Trim42Q9D2H5 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Trim42Q9D2H5 Zfp950-206ENSMUST00000178819 171 ntBASIC7.87□□□□□ -1.15
Trim42Q9D2H5 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Trim42Q9D2H5 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC7.87□□□□□ -1.15
Trim42Q9D2H5 Gm29492-201ENSMUST00000187124 457 ntBASIC7.87□□□□□ -1.15
Trim42Q9D2H5 4930548G14Rik-202ENSMUST00000190364 1185 ntTSL 2 BASIC7.87□□□□□ -1.15
Trim42Q9D2H5 Gm38231-201ENSMUST00000192030 347 ntBASIC7.87□□□□□ -1.15
Trim42Q9D2H5 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC7.87□□□□□ -1.15
Trim42Q9D2H5 Gm37839-201ENSMUST00000192576 492 ntTSL 5 BASIC7.87□□□□□ -1.15
Trim42Q9D2H5 Gm17979-201ENSMUST00000196646 611 ntBASIC7.87□□□□□ -1.15
Trim42Q9D2H5 Gm44159-201ENSMUST00000204065 442 ntBASIC7.87□□□□□ -1.15
Trim42Q9D2H5 Gm44659-201ENSMUST00000207269 436 ntTSL 2 BASIC7.87□□□□□ -1.15
Trim42Q9D2H5 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC7.87□□□□□ -1.15
Trim42Q9D2H5 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Trim42Q9D2H5 AC118733.1-201ENSMUST00000217387 1217 ntBASIC7.87□□□□□ -1.15
Trim42Q9D2H5 C230072F16Rik-201ENSMUST00000219184 1253 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Trim42Q9D2H5 Gm7476-201ENSMUST00000220112 661 ntBASIC7.87□□□□□ -1.15
Trim42Q9D2H5 Gm18783-201ENSMUST00000220465 1151 ntBASIC7.87□□□□□ -1.15
Trim42Q9D2H5 4930404H11Rik-202ENSMUST00000222756 1271 ntTSL 5 BASIC7.87□□□□□ -1.15
Trim42Q9D2H5 AC192333.4-201ENSMUST00000224269 981 ntBASIC7.87□□□□□ -1.15
Trim42Q9D2H5 AC117656.3-204ENSMUST00000225656 859 ntBASIC7.87□□□□□ -1.15
Trim42Q9D2H5 AC102139.1-201ENSMUST00000227000 251 ntBASIC7.87□□□□□ -1.15
Trim42Q9D2H5 9230104L09Rik-201ENSMUST00000028937 661 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trim42Q9D2H5 Ino80c-201ENSMUST00000055012 909 ntTSL 5 BASIC7.87□□□□□ -1.15
Trim42Q9D2H5 Slurp2-201ENSMUST00000057932 545 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trim42Q9D2H5 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC7.87□□□□□ -1.15
Trim42Q9D2H5 Ang5-201ENSMUST00000066719 700 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trim42Q9D2H5 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC7.87□□□□□ -1.15
Trim42Q9D2H5 Tas2r120-201ENSMUST00000071707 892 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Trim42Q9D2H5 Olfr403-201ENSMUST00000076675 942 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Trim42Q9D2H5 Olfr43-201ENSMUST00000078936 1092 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Trim42Q9D2H5 Olfr890-201ENSMUST00000079804 945 ntBASIC7.87□□□□□ -1.15
Trim42Q9D2H5 Gm20302-201ENSMUST00000080671 275 ntBASIC7.87□□□□□ -1.15
Trim42Q9D2H5 Adgrg4-201ENSMUST00000096431 1137 ntTSL 2 BASIC7.87□□□□□ -1.15
Trim42Q9D2H5 Olfr688-201ENSMUST00000098155 966 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Trim42Q9D2H5 Olfr78-202ENSMUST00000168007 1962 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trim42Q9D2H5 Gm10419-204ENSMUST00000198585 4059 ntTSL 2 BASIC7.87□□□□□ -1.15
Trim42Q9D2H5 Gm37510-201ENSMUST00000194151 4762 ntBASIC7.87□□□□□ -1.15
Trim42Q9D2H5 Gm43526-201ENSMUST00000196666 1565 ntBASIC7.87□□□□□ -1.15
Trim42Q9D2H5 Ugt2b37-201ENSMUST00000075858 1894 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trim42Q9D2H5 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trim42Q9D2H5 4930579H20Rik-201ENSMUST00000187815 1516 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Trim42Q9D2H5 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC7.87□□□□□ -1.15
Trim42Q9D2H5 Csrnp3-201ENSMUST00000053910 4495 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trim42Q9D2H5 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trim42Q9D2H5 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC7.87□□□□□ -1.15
Trim42Q9D2H5 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC7.87□□□□□ -1.15
Trim42Q9D2H5 AC192333.5-201ENSMUST00000224620 2350 ntBASIC7.86□□□□□ -1.15
Trim42Q9D2H5 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trim42Q9D2H5 Entpd5-205ENSMUST00000120942 4881 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trim42Q9D2H5 Gjc1-203ENSMUST00000107075 2314 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trim42Q9D2H5 Mphosph9-211ENSMUST00000184951 5008 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
Trim42Q9D2H5 Zfp979-202ENSMUST00000105720 2594 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
Trim42Q9D2H5 Vmn2r105-201ENSMUST00000167382 2583 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Trim42Q9D2H5 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Trim42Q9D2H5 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC7.86□□□□□ -1.15
Trim42Q9D2H5 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trim42Q9D2H5 Gm45876-201ENSMUST00000212698 2709 ntBASIC7.86□□□□□ -1.15
Trim42Q9D2H5 Xlr3a-202ENSMUST00000114524 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trim42Q9D2H5 Gm8914-201ENSMUST00000101396 1035 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Trim42Q9D2H5 Igkv11-106-201ENSMUST00000103331 346 ntBASIC7.86□□□□□ -1.15
Trim42Q9D2H5 Trav13n-4-201ENSMUST00000103634 267 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Trim42Q9D2H5 Gm5071-201ENSMUST00000104922 1035 ntBASIC7.86□□□□□ -1.15
Trim42Q9D2H5 Rpl23a-ps3-201ENSMUST00000104925 468 ntBASIC7.86□□□□□ -1.15
Trim42Q9D2H5 Calhm1-201ENSMUST00000111813 1047 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Trim42Q9D2H5 Gm11359-201ENSMUST00000120039 567 ntBASIC7.86□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms