Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Smc1aQ9CU62 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Smc1aQ9CU62 Cmah-208ENSMUST00000224819 9482 ntBASIC7.93□□□□□ -1.14
Smc1aQ9CU62 CT025619.3-201ENSMUST00000216299 3267 ntBASIC7.93□□□□□ -1.14
Smc1aQ9CU62 Gm14380-201ENSMUST00000122298 431 ntBASIC7.93□□□□□ -1.14
Smc1aQ9CU62 Gm14155-201ENSMUST00000127230 587 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Smc1aQ9CU62 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC7.93□□□□□ -1.14
Smc1aQ9CU62 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Smc1aQ9CU62 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Smc1aQ9CU62 Gm26607-201ENSMUST00000180661 867 ntBASIC7.93□□□□□ -1.14
Smc1aQ9CU62 Gm28580-201ENSMUST00000186767 88 ntBASIC7.93□□□□□ -1.14
Smc1aQ9CU62 1700028D13Rik-202ENSMUST00000187272 675 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Smc1aQ9CU62 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Smc1aQ9CU62 Gm29383-201ENSMUST00000188284 480 ntBASIC7.93□□□□□ -1.14
Smc1aQ9CU62 Gm8182-201ENSMUST00000197863 769 ntBASIC7.93□□□□□ -1.14
Smc1aQ9CU62 Gm44258-201ENSMUST00000204925 301 ntBASIC7.93□□□□□ -1.14
Smc1aQ9CU62 Olfr451-ps1-201ENSMUST00000205127 936 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Smc1aQ9CU62 Gm35520-201ENSMUST00000209235 784 ntTSL 5 BASIC7.93□□□□□ -1.14
Smc1aQ9CU62 Gm45725-201ENSMUST00000212962 337 ntBASIC7.93□□□□□ -1.14
Smc1aQ9CU62 Mrpl42-202ENSMUST00000217777 455 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Smc1aQ9CU62 Atp8b3-202ENSMUST00000219648 524 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Smc1aQ9CU62 Gm31711-201ENSMUST00000220687 196 ntBASIC7.93□□□□□ -1.14
Smc1aQ9CU62 Cfap126-201ENSMUST00000027959 1034 ntAPPRIS P2 TSL 1 (best) BASIC7.93□□□□□ -1.14
Smc1aQ9CU62 Serpina3h-201ENSMUST00000049922 1239 ntTSL 5 BASIC7.93□□□□□ -1.14
Smc1aQ9CU62 Olfr299-201ENSMUST00000057734 993 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Smc1aQ9CU62 Olfr1427-201ENSMUST00000087825 938 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Smc1aQ9CU62 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC7.93□□□□□ -1.14
Smc1aQ9CU62 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Smc1aQ9CU62 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Smc1aQ9CU62 Gm42973-201ENSMUST00000197913 3200 ntBASIC7.93□□□□□ -1.14
Smc1aQ9CU62 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Smc1aQ9CU62 Gm20075-201ENSMUST00000220449 2161 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Smc1aQ9CU62 Gm10388-201ENSMUST00000205001 2936 ntBASIC7.92□□□□□ -1.14
Smc1aQ9CU62 Rgn-201ENSMUST00000023832 1607 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Smc1aQ9CU62 Gm4806-201ENSMUST00000222704 1690 ntBASIC7.92□□□□□ -1.14
Smc1aQ9CU62 Gm10743-201ENSMUST00000219611 2358 ntBASIC7.92□□□□□ -1.14
Smc1aQ9CU62 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC7.92□□□□□ -1.14
Smc1aQ9CU62 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Smc1aQ9CU62 Vmn1r37-205ENSMUST00000227923 1773 ntAPPRIS P2 BASIC7.92□□□□□ -1.14
Smc1aQ9CU62 AC139941.2-201ENSMUST00000221565 1824 ntBASIC7.92□□□□□ -1.14
Smc1aQ9CU62 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
Smc1aQ9CU62 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Smc1aQ9CU62 Gm15448-205ENSMUST00000189095 1905 ntTSL 5 BASIC7.92□□□□□ -1.14
Smc1aQ9CU62 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Smc1aQ9CU62 Pank1-202ENSMUST00000112460 2759 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Smc1aQ9CU62 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Smc1aQ9CU62 Gm23485-201ENSMUST00000104181 155 ntBASIC7.92□□□□□ -1.14
Smc1aQ9CU62 Gm11416-201ENSMUST00000119111 863 ntBASIC7.92□□□□□ -1.14
Smc1aQ9CU62 Gm12375-201ENSMUST00000119331 921 ntBASIC7.92□□□□□ -1.14
Smc1aQ9CU62 Gm12634-201ENSMUST00000122157 992 ntBASIC7.92□□□□□ -1.14
Smc1aQ9CU62 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC7.92□□□□□ -1.14
Smc1aQ9CU62 Gm13840-201ENSMUST00000149608 256 ntTSL 2 BASIC7.92□□□□□ -1.14
Smc1aQ9CU62 Gm6264-201ENSMUST00000160802 624 ntBASIC7.92□□□□□ -1.14
Smc1aQ9CU62 Olfr819-201ENSMUST00000167974 963 ntAPPRIS P2 BASIC7.92□□□□□ -1.14
Smc1aQ9CU62 Olfr247-201ENSMUST00000170920 963 ntAPPRIS ALT2 BASIC7.92□□□□□ -1.14
Smc1aQ9CU62 Gm23018-201ENSMUST00000177928 109 ntBASIC7.92□□□□□ -1.14
Smc1aQ9CU62 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
Smc1aQ9CU62 C430002N11Rik-202ENSMUST00000189067 1029 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Smc1aQ9CU62 Gm38079-201ENSMUST00000195603 154 ntBASIC7.92□□□□□ -1.14
Smc1aQ9CU62 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Smc1aQ9CU62 Gm45345-201ENSMUST00000211427 555 ntTSL 2 BASIC7.92□□□□□ -1.14
Smc1aQ9CU62 Rps27rt-201ENSMUST00000053150 374 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
Smc1aQ9CU62 Olfr1262-201ENSMUST00000061701 1024 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
Smc1aQ9CU62 Gm10310-201ENSMUST00000095239 963 ntAPPRIS ALT2 BASIC7.92□□□□□ -1.14
Smc1aQ9CU62 Gm40778-201ENSMUST00000217825 1344 ntBASIC7.92□□□□□ -1.14
Smc1aQ9CU62 AC107452.3-201ENSMUST00000228807 1308 ntBASIC7.92□□□□□ -1.14
Smc1aQ9CU62 Kank4os-201ENSMUST00000133455 2251 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Smc1aQ9CU62 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Smc1aQ9CU62 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Smc1aQ9CU62 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Smc1aQ9CU62 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
Smc1aQ9CU62 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Smc1aQ9CU62 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Smc1aQ9CU62 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
Smc1aQ9CU62 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
Smc1aQ9CU62 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Smc1aQ9CU62 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC7.92□□□□□ -1.14
Smc1aQ9CU62 Gm14762-201ENSMUST00000105109 1771 ntBASIC7.92□□□□□ -1.14
Smc1aQ9CU62 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Smc1aQ9CU62 Gm30329-201ENSMUST00000211572 3077 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Smc1aQ9CU62 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Smc1aQ9CU62 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Smc1aQ9CU62 Gjc3-201ENSMUST00000077119 4002 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Smc1aQ9CU62 Vmn2r118-201ENSMUST00000168440 2562 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
Smc1aQ9CU62 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
Smc1aQ9CU62 Gm37410-201ENSMUST00000193623 3039 ntBASIC7.91□□□□□ -1.14
Smc1aQ9CU62 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC7.91□□□□□ -1.14
Smc1aQ9CU62 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC7.91□□□□□ -1.14
Smc1aQ9CU62 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC7.91□□□□□ -1.14
Smc1aQ9CU62 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC7.91□□□□□ -1.14
Smc1aQ9CU62 Gm13362-201ENSMUST00000137186 839 ntTSL 3 BASIC7.91□□□□□ -1.14
Smc1aQ9CU62 Gm2619-202ENSMUST00000166777 651 ntBASIC7.91□□□□□ -1.14
Smc1aQ9CU62 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC7.91□□□□□ -1.14
Smc1aQ9CU62 Mir8094-201ENSMUST00000183361 117 ntBASIC7.91□□□□□ -1.14
Smc1aQ9CU62 Mir8120-201ENSMUST00000185035 139 ntBASIC7.91□□□□□ -1.14
Smc1aQ9CU62 Gm9127-201ENSMUST00000188041 985 ntBASIC7.91□□□□□ -1.14
Smc1aQ9CU62 Gm29369-201ENSMUST00000190674 615 ntBASIC7.91□□□□□ -1.14
Smc1aQ9CU62 Gm29129-201ENSMUST00000191121 659 ntTSL 3 BASIC7.91□□□□□ -1.14
Smc1aQ9CU62 Gm38030-201ENSMUST00000192376 475 ntBASIC7.91□□□□□ -1.14
Smc1aQ9CU62 4930565D16Rik-201ENSMUST00000192777 1112 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 143.3 ms