Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Gm10862-201ENSMUST00000193956 3350 ntBASIC6.91□□□□□ -1.3
Msh4Q99MT2 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
Msh4Q99MT2 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Msh4Q99MT2 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC6.91□□□□□ -1.3
Msh4Q99MT2 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Msh4Q99MT2 Ogdh-203ENSMUST00000093350 4075 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Msh4Q99MT2 Tmem87a-203ENSMUST00000110729 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Msh4Q99MT2 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Msh4Q99MT2 Rgn-201ENSMUST00000023832 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Msh4Q99MT2 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Msh4Q99MT2 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Msh4Q99MT2 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Msh4Q99MT2 N4bp2-204ENSMUST00000201489 9055 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Msh4Q99MT2 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
Msh4Q99MT2 Gm12021-201ENSMUST00000121061 1746 ntBASIC6.9□□□□□ -1.3
Msh4Q99MT2 Gm18313-201ENSMUST00000221036 1784 ntBASIC6.9□□□□□ -1.3
Msh4Q99MT2 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
Msh4Q99MT2 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC6.9□□□□□ -1.3
Msh4Q99MT2 Adcy10-203ENSMUST00000111440 5078 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
Msh4Q99MT2 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
Msh4Q99MT2 E030022I16Rik-201ENSMUST00000215131 2766 ntBASIC6.9□□□□□ -1.3
Msh4Q99MT2 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Msh4Q99MT2 Fancl-202ENSMUST00000109509 1187 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Msh4Q99MT2 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC6.9□□□□□ -1.3
Msh4Q99MT2 Gm17170-201ENSMUST00000112785 316 ntBASIC6.9□□□□□ -1.3
Msh4Q99MT2 Gm9506-201ENSMUST00000118516 320 ntBASIC6.9□□□□□ -1.3
Msh4Q99MT2 Gm13545-201ENSMUST00000119044 482 ntBASIC6.9□□□□□ -1.3
Msh4Q99MT2 Gm13130-201ENSMUST00000119195 1166 ntBASIC6.9□□□□□ -1.3
Msh4Q99MT2 Gm15186-201ENSMUST00000119345 563 ntBASIC6.9□□□□□ -1.3
Msh4Q99MT2 Gm12920-201ENSMUST00000121818 1186 ntBASIC6.9□□□□□ -1.3
Msh4Q99MT2 4931428L18Rik-201ENSMUST00000127775 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Msh4Q99MT2 Slc25a5-ps-201ENSMUST00000162199 826 ntBASIC6.9□□□□□ -1.3
Msh4Q99MT2 Gm5611-201ENSMUST00000164523 852 ntBASIC6.9□□□□□ -1.3
Msh4Q99MT2 Gm7651-201ENSMUST00000173398 901 ntBASIC6.9□□□□□ -1.3
Msh4Q99MT2 Esd-208ENSMUST00000177137 853 ntTSL 5 BASIC6.9□□□□□ -1.3
Msh4Q99MT2 Esd-209ENSMUST00000177181 835 ntTSL 5 BASIC6.9□□□□□ -1.3
Msh4Q99MT2 Gm8305-201ENSMUST00000180022 1195 ntBASIC6.9□□□□□ -1.3
Msh4Q99MT2 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Msh4Q99MT2 Gm18848-201ENSMUST00000182069 792 ntBASIC6.9□□□□□ -1.3
Msh4Q99MT2 Gm18501-201ENSMUST00000185363 664 ntBASIC6.9□□□□□ -1.3
Msh4Q99MT2 C430002N11Rik-202ENSMUST00000189067 1029 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Msh4Q99MT2 Gm29496-201ENSMUST00000189854 693 ntBASIC6.9□□□□□ -1.3
Msh4Q99MT2 Gm21292-202ENSMUST00000190329 1225 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Msh4Q99MT2 1700025K24Rik-201ENSMUST00000190635 740 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Msh4Q99MT2 Gm36928-201ENSMUST00000192466 694 ntBASIC6.9□□□□□ -1.3
Msh4Q99MT2 Gm37325-201ENSMUST00000194971 694 ntBASIC6.9□□□□□ -1.3
Msh4Q99MT2 Gm43212-201ENSMUST00000198208 394 ntBASIC6.9□□□□□ -1.3
Msh4Q99MT2 Gm45045-201ENSMUST00000207368 218 ntTSL 5 BASIC6.9□□□□□ -1.3
Msh4Q99MT2 Gm45666-201ENSMUST00000211474 277 ntTSL 5 BASIC6.9□□□□□ -1.3
Msh4Q99MT2 Gm18860-201ENSMUST00000212029 764 ntBASIC6.9□□□□□ -1.3
Msh4Q99MT2 Gm6581-201ENSMUST00000214545 260 ntBASIC6.9□□□□□ -1.3
Msh4Q99MT2 CT009718.2-202ENSMUST00000222092 704 ntTSL 2 BASIC6.9□□□□□ -1.3
Msh4Q99MT2 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Msh4Q99MT2 CT009728.1-201ENSMUST00000225228 1050 ntBASIC6.9□□□□□ -1.3
Msh4Q99MT2 AC130219.2-201ENSMUST00000228765 807 ntBASIC6.9□□□□□ -1.3
Msh4Q99MT2 Olfr735-201ENSMUST00000049729 1065 ntAPPRIS P2 BASIC6.9□□□□□ -1.3
Msh4Q99MT2 Olfr266-201ENSMUST00000059486 1027 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Msh4Q99MT2 Gm2108-201ENSMUST00000165058 2177 ntBASIC6.9□□□□□ -1.3
Msh4Q99MT2 Olfr930-202ENSMUST00000217208 1313 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Msh4Q99MT2 Il18bp-201ENSMUST00000094134 1311 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Msh4Q99MT2 Gm12346-201ENSMUST00000121455 2255 ntBASIC6.9□□□□□ -1.31
Msh4Q99MT2 AC153962.2-202ENSMUST00000219391 1382 ntTSL 5 BASIC6.9□□□□□ -1.31
Msh4Q99MT2 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC6.9□□□□□ -1.31
Msh4Q99MT2 Gm5702-201ENSMUST00000185629 2469 ntBASIC6.9□□□□□ -1.31
Msh4Q99MT2 Prkaa1-201ENSMUST00000051186 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Msh4Q99MT2 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
Msh4Q99MT2 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.31
Msh4Q99MT2 Gm37206-201ENSMUST00000195512 3069 ntBASIC6.9□□□□□ -1.31
Msh4Q99MT2 Olfr43-204ENSMUST00000215550 1854 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.31
Msh4Q99MT2 CT010470.1-201ENSMUST00000225364 1876 ntBASIC6.9□□□□□ -1.31
Msh4Q99MT2 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Msh4Q99MT2 AC138284.1-201ENSMUST00000214258 3236 ntBASIC6.89□□□□□ -1.31
Msh4Q99MT2 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC6.89□□□□□ -1.31
Msh4Q99MT2 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
Msh4Q99MT2 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Msh4Q99MT2 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Msh4Q99MT2 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Msh4Q99MT2 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Msh4Q99MT2 Gm36527-201ENSMUST00000195500 3029 ntBASIC6.89□□□□□ -1.31
Msh4Q99MT2 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Msh4Q99MT2 Olfr1062-201ENSMUST00000105213 956 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Msh4Q99MT2 Klra7-204ENSMUST00000112013 1104 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Msh4Q99MT2 Gm11864-201ENSMUST00000116179 1220 ntBASIC6.89□□□□□ -1.31
Msh4Q99MT2 Gm649-201ENSMUST00000117284 1054 ntBASIC6.89□□□□□ -1.31
Msh4Q99MT2 Gm11653-201ENSMUST00000119992 1009 ntBASIC6.89□□□□□ -1.31
Msh4Q99MT2 Gm5970-201ENSMUST00000131638 1216 ntBASIC6.89□□□□□ -1.31
Msh4Q99MT2 Gm12590-201ENSMUST00000134226 404 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Msh4Q99MT2 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC6.89□□□□□ -1.31
Msh4Q99MT2 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Msh4Q99MT2 Gm19840-201ENSMUST00000169624 882 ntBASIC6.89□□□□□ -1.31
Msh4Q99MT2 Gm28416-201ENSMUST00000188334 292 ntBASIC6.89□□□□□ -1.31
Msh4Q99MT2 Gm29011-201ENSMUST00000191059 712 ntBASIC6.89□□□□□ -1.31
Msh4Q99MT2 Gm37295-201ENSMUST00000192186 109 ntBASIC6.89□□□□□ -1.31
Msh4Q99MT2 Gm37629-201ENSMUST00000193635 1050 ntBASIC6.89□□□□□ -1.31
Msh4Q99MT2 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Msh4Q99MT2 Gm43928-201ENSMUST00000203737 409 ntBASIC6.89□□□□□ -1.31
Msh4Q99MT2 Gm45042-201ENSMUST00000207377 211 ntBASIC6.89□□□□□ -1.31
Msh4Q99MT2 Ccl7-201ENSMUST00000021011 801 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Msh4Q99MT2 Gm19217-201ENSMUST00000218238 328 ntBASIC6.89□□□□□ -1.31
Msh4Q99MT2 Tbca-204ENSMUST00000220825 497 ntTSL 3 BASIC6.89□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms