Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Usp40-201ENSMUST00000040783 5049 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
Scrt1Q99M85 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Scrt1Q99M85 Zeb2-213ENSMUST00000176732 1762 ntTSL 5 BASIC6.26□□□□□ -1.41
Scrt1Q99M85 Gm43873-201ENSMUST00000204505 3938 ntBASIC6.26□□□□□ -1.41
Scrt1Q99M85 Olfr1396-201ENSMUST00000060398 3946 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Scrt1Q99M85 Ptch1-202ENSMUST00000192155 7002 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Scrt1Q99M85 Zfp976-201ENSMUST00000098503 1976 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
Scrt1Q99M85 Gfpt1-204ENSMUST00000113658 6238 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Scrt1Q99M85 Gm2108-201ENSMUST00000165058 2177 ntBASIC6.25□□□□□ -1.41
Scrt1Q99M85 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Scrt1Q99M85 Glrx-201ENSMUST00000022082 1345 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Scrt1Q99M85 Stt3a-201ENSMUST00000120381 5867 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Scrt1Q99M85 Gm20731-201ENSMUST00000193462 2288 ntBASIC6.25□□□□□ -1.41
Scrt1Q99M85 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC6.25□□□□□ -1.41
Scrt1Q99M85 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Scrt1Q99M85 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Scrt1Q99M85 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Scrt1Q99M85 Cabyr-207ENSMUST00000191078 1642 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
Scrt1Q99M85 Rnf219-202ENSMUST00000227640 1632 ntAPPRIS ALT2 BASIC6.25□□□□□ -1.41
Scrt1Q99M85 Gm16427-202ENSMUST00000200745 1749 ntAPPRIS P5 TSL 2 BASIC6.25□□□□□ -1.41
Scrt1Q99M85 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Scrt1Q99M85 Gimap4-202ENSMUST00000090070 1804 ntAPPRIS P3 TSL 2 BASIC6.25□□□□□ -1.41
Scrt1Q99M85 Mxi1-203ENSMUST00000111737 4843 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Scrt1Q99M85 Nsun7-201ENSMUST00000031109 2345 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Scrt1Q99M85 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Scrt1Q99M85 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
Scrt1Q99M85 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Scrt1Q99M85 Gm11850-201ENSMUST00000119679 479 ntBASIC6.25□□□□□ -1.41
Scrt1Q99M85 Gm12175-201ENSMUST00000122081 345 ntBASIC6.25□□□□□ -1.41
Scrt1Q99M85 Gm26480-201ENSMUST00000122619 297 ntBASIC6.25□□□□□ -1.41
Scrt1Q99M85 Gm22342-201ENSMUST00000122647 298 ntBASIC6.25□□□□□ -1.41
Scrt1Q99M85 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Scrt1Q99M85 Gm26183-201ENSMUST00000157685 139 ntBASIC6.25□□□□□ -1.41
Scrt1Q99M85 Gm22882-201ENSMUST00000157749 124 ntBASIC6.25□□□□□ -1.41
Scrt1Q99M85 Wfdc15b-201ENSMUST00000018355 510 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Scrt1Q99M85 Ptma-204ENSMUST00000188533 593 ntTSL 3 BASIC6.25□□□□□ -1.41
Scrt1Q99M85 Gm29143-201ENSMUST00000189462 201 ntBASIC6.25□□□□□ -1.41
Scrt1Q99M85 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC6.25□□□□□ -1.41
Scrt1Q99M85 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Scrt1Q99M85 Gm45626-201ENSMUST00000210093 361 ntBASIC6.25□□□□□ -1.41
Scrt1Q99M85 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC6.25□□□□□ -1.41
Scrt1Q99M85 Gm5528-201ENSMUST00000076314 480 ntBASIC6.25□□□□□ -1.41
Scrt1Q99M85 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC6.25□□□□□ -1.41
Scrt1Q99M85 Olfr1312-201ENSMUST00000099600 954 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Scrt1Q99M85 Gm18830-201ENSMUST00000199036 1396 ntBASIC6.25□□□□□ -1.41
Scrt1Q99M85 Olfr370-202ENSMUST00000209408 4600 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
Scrt1Q99M85 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Scrt1Q99M85 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Scrt1Q99M85 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Scrt1Q99M85 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
Scrt1Q99M85 Rnf24-204ENSMUST00000165420 5833 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
Scrt1Q99M85 Rtel1-201ENSMUST00000048608 4135 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Scrt1Q99M85 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Scrt1Q99M85 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Scrt1Q99M85 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Scrt1Q99M85 AC120347.2-201ENSMUST00000222224 2015 ntBASIC6.25□□□□□ -1.41
Scrt1Q99M85 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Scrt1Q99M85 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Scrt1Q99M85 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Scrt1Q99M85 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Scrt1Q99M85 Saa4-201ENSMUST00000006952 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Scrt1Q99M85 Olfr449-202ENSMUST00000204072 1974 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
Scrt1Q99M85 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC6.24□□□□□ -1.41
Scrt1Q99M85 Zscan4b-202ENSMUST00000210847 1779 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Scrt1Q99M85 Gm43533-201ENSMUST00000202933 2936 ntBASIC6.24□□□□□ -1.41
Scrt1Q99M85 Slco2b1-202ENSMUST00000107086 3993 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Scrt1Q99M85 Cxcr1-202ENSMUST00000190313 1451 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Scrt1Q99M85 Wdr19-201ENSMUST00000041892 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Scrt1Q99M85 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Scrt1Q99M85 CT009757.6-201ENSMUST00000220661 2312 ntBASIC6.24□□□□□ -1.41
Scrt1Q99M85 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Scrt1Q99M85 Fate1-202ENSMUST00000114569 1053 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Scrt1Q99M85 Tdpx-ps1-201ENSMUST00000117372 597 ntBASIC6.24□□□□□ -1.41
Scrt1Q99M85 Gm11889-201ENSMUST00000118402 1079 ntBASIC6.24□□□□□ -1.41
Scrt1Q99M85 Gm9439-201ENSMUST00000119554 973 ntBASIC6.24□□□□□ -1.41
Scrt1Q99M85 Gm14847-201ENSMUST00000121978 519 ntBASIC6.24□□□□□ -1.41
Scrt1Q99M85 Gm11895-201ENSMUST00000122165 467 ntBASIC6.24□□□□□ -1.41
Scrt1Q99M85 Gm13669-201ENSMUST00000122366 457 ntBASIC6.24□□□□□ -1.41
Scrt1Q99M85 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC6.24□□□□□ -1.41
Scrt1Q99M85 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Scrt1Q99M85 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Scrt1Q99M85 Gm25556-201ENSMUST00000158077 144 ntBASIC6.24□□□□□ -1.41
Scrt1Q99M85 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
Scrt1Q99M85 Gm17022-201ENSMUST00000166415 922 ntBASIC6.24□□□□□ -1.41
Scrt1Q99M85 Gm3208-201ENSMUST00000168281 427 ntBASIC6.24□□□□□ -1.41
Scrt1Q99M85 1110038B12Rik-201ENSMUST00000172501 579 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Scrt1Q99M85 Gm5871-201ENSMUST00000176461 718 ntBASIC6.24□□□□□ -1.41
Scrt1Q99M85 Gm20379-201ENSMUST00000188317 1204 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Scrt1Q99M85 Gm16754-202ENSMUST00000193429 508 ntTSL 3 BASIC6.24□□□□□ -1.41
Scrt1Q99M85 1810049I09Rik-201ENSMUST00000205499 453 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Scrt1Q99M85 Gm44538-201ENSMUST00000205615 348 ntBASIC6.24□□□□□ -1.41
Scrt1Q99M85 Gm39075-201ENSMUST00000206031 512 ntTSL 5 BASIC6.24□□□□□ -1.41
Scrt1Q99M85 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Scrt1Q99M85 Gm4972-201ENSMUST00000211108 1254 ntBASIC6.24□□□□□ -1.41
Scrt1Q99M85 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Scrt1Q99M85 AC166078.1-201ENSMUST00000217211 584 ntTSL 2 BASIC6.24□□□□□ -1.41
Scrt1Q99M85 Gm32105-201ENSMUST00000218512 511 ntTSL 5 BASIC6.24□□□□□ -1.41
Scrt1Q99M85 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC6.24□□□□□ -1.41
Scrt1Q99M85 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Scrt1Q99M85 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms