Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC6.9□□□□□ -1.3
Clrn1Q8K445 Gm4910-201ENSMUST00000119605 366 ntBASIC6.9□□□□□ -1.3
Clrn1Q8K445 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Clrn1Q8K445 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC6.9□□□□□ -1.3
Clrn1Q8K445 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Clrn1Q8K445 Insig2-208ENSMUST00000160968 1204 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Clrn1Q8K445 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC6.9□□□□□ -1.3
Clrn1Q8K445 Gm3611-201ENSMUST00000173687 877 ntBASIC6.9□□□□□ -1.3
Clrn1Q8K445 Smarca2-210ENSMUST00000176475 983 ntTSL 5 BASIC6.9□□□□□ -1.3
Clrn1Q8K445 Gm27160-201ENSMUST00000184837 199 ntBASIC6.9□□□□□ -1.3
Clrn1Q8K445 Mir6409-201ENSMUST00000184957 92 ntBASIC6.9□□□□□ -1.3
Clrn1Q8K445 4931428L18Rik-203ENSMUST00000187659 423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Clrn1Q8K445 Gm28285-204ENSMUST00000187793 601 ntAPPRIS P5 TSL 5 BASIC6.9□□□□□ -1.3
Clrn1Q8K445 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC6.9□□□□□ -1.3
Clrn1Q8K445 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC6.9□□□□□ -1.3
Clrn1Q8K445 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC6.9□□□□□ -1.3
Clrn1Q8K445 Gm17965-201ENSMUST00000193904 517 ntBASIC6.9□□□□□ -1.3
Clrn1Q8K445 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC6.9□□□□□ -1.3
Clrn1Q8K445 Lmo3-208ENSMUST00000203435 572 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Clrn1Q8K445 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Clrn1Q8K445 1810049I09Rik-201ENSMUST00000205499 453 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Clrn1Q8K445 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC6.9□□□□□ -1.3
Clrn1Q8K445 Gm18943-201ENSMUST00000207357 1216 ntBASIC6.9□□□□□ -1.3
Clrn1Q8K445 E230029C05Rik-204ENSMUST00000208266 875 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Clrn1Q8K445 Smarca2-238ENSMUST00000208589 1054 ntTSL 5 BASIC6.9□□□□□ -1.3
Clrn1Q8K445 Gm18469-201ENSMUST00000208850 439 ntBASIC6.9□□□□□ -1.3
Clrn1Q8K445 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC6.9□□□□□ -1.3
Clrn1Q8K445 Gm45887-201ENSMUST00000212672 2998 ntBASIC6.9□□□□□ -1.3
Clrn1Q8K445 AC154219.1-201ENSMUST00000220764 1262 ntBASIC6.9□□□□□ -1.3
Clrn1Q8K445 AL591207.2-201ENSMUST00000222991 337 ntBASIC6.9□□□□□ -1.3
Clrn1Q8K445 AC131187.2-201ENSMUST00000223936 994 ntBASIC6.9□□□□□ -1.3
Clrn1Q8K445 AC165154.2-201ENSMUST00000227310 336 ntBASIC6.9□□□□□ -1.3
Clrn1Q8K445 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Clrn1Q8K445 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC6.9□□□□□ -1.3
Clrn1Q8K445 Insig2-202ENSMUST00000071064 1292 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Clrn1Q8K445 Gm5471-201ENSMUST00000072732 337 ntBASIC6.9□□□□□ -1.3
Clrn1Q8K445 Gm25852-201ENSMUST00000082790 130 ntBASIC6.9□□□□□ -1.3
Clrn1Q8K445 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC6.9□□□□□ -1.3
Clrn1Q8K445 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC6.9□□□□□ -1.31
Clrn1Q8K445 Rnf146-205ENSMUST00000162335 1434 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Clrn1Q8K445 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Clrn1Q8K445 1700007E05Rik-201ENSMUST00000186196 1513 ntBASIC6.9□□□□□ -1.31
Clrn1Q8K445 Gm15834-202ENSMUST00000139825 2613 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Clrn1Q8K445 Aadat-202ENSMUST00000209338 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
Clrn1Q8K445 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
Clrn1Q8K445 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Clrn1Q8K445 Tcf24-201ENSMUST00000097824 2639 ntBASIC6.9□□□□□ -1.31
Clrn1Q8K445 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Clrn1Q8K445 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC6.9□□□□□ -1.31
Clrn1Q8K445 Sox6-206ENSMUST00000205405 2903 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
Clrn1Q8K445 Gm3476-202ENSMUST00000167913 1759 ntAPPRIS P5 TSL 5 BASIC6.9□□□□□ -1.31
Clrn1Q8K445 Bmx-202ENSMUST00000112265 3005 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.31
Clrn1Q8K445 Magea10-201ENSMUST00000088481 1821 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Clrn1Q8K445 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC6.9□□□□□ -1.31
Clrn1Q8K445 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC6.89□□□□□ -1.31
Clrn1Q8K445 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Clrn1Q8K445 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Clrn1Q8K445 Irgm1-202ENSMUST00000097271 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Clrn1Q8K445 Garnl3-202ENSMUST00000102810 3578 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Clrn1Q8K445 Zranb1-205ENSMUST00000215716 2205 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Clrn1Q8K445 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC6.89□□□□□ -1.31
Clrn1Q8K445 Gm6866-201ENSMUST00000188559 2549 ntBASIC6.89□□□□□ -1.31
Clrn1Q8K445 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Clrn1Q8K445 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Clrn1Q8K445 Cldn2-201ENSMUST00000054889 3044 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Clrn1Q8K445 Pmfbp1-201ENSMUST00000034162 3396 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Clrn1Q8K445 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Clrn1Q8K445 Iglv1-201ENSMUST00000103746 391 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Clrn1Q8K445 Gm24986-201ENSMUST00000104452 132 ntBASIC6.89□□□□□ -1.31
Clrn1Q8K445 Mup3-202ENSMUST00000107472 916 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Clrn1Q8K445 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC6.89□□□□□ -1.31
Clrn1Q8K445 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC6.89□□□□□ -1.31
Clrn1Q8K445 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Clrn1Q8K445 Gm11383-201ENSMUST00000121346 807 ntBASIC6.89□□□□□ -1.31
Clrn1Q8K445 Rps16-ps2-201ENSMUST00000140155 441 ntBASIC6.89□□□□□ -1.31
Clrn1Q8K445 Plxna4os3-202ENSMUST00000143328 277 ntTSL 3 BASIC6.89□□□□□ -1.31
Clrn1Q8K445 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC6.89□□□□□ -1.31
Clrn1Q8K445 Cd48-201ENSMUST00000015499 922 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Clrn1Q8K445 Gm24647-201ENSMUST00000157112 113 ntBASIC6.89□□□□□ -1.31
Clrn1Q8K445 Gm22795-201ENSMUST00000157233 118 ntBASIC6.89□□□□□ -1.31
Clrn1Q8K445 Gm22206-201ENSMUST00000158612 116 ntBASIC6.89□□□□□ -1.31
Clrn1Q8K445 Gm8624-202ENSMUST00000165677 669 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Clrn1Q8K445 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC6.89□□□□□ -1.31
Clrn1Q8K445 Gm2505-201ENSMUST00000200413 825 ntBASIC6.89□□□□□ -1.31
Clrn1Q8K445 Gm43596-201ENSMUST00000202818 884 ntBASIC6.89□□□□□ -1.31
Clrn1Q8K445 Gm43992-201ENSMUST00000204358 197 ntBASIC6.89□□□□□ -1.31
Clrn1Q8K445 Olfr97-202ENSMUST00000207414 933 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Clrn1Q8K445 Olfr724-202ENSMUST00000213390 1152 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Clrn1Q8K445 AC163664.1-201ENSMUST00000226251 1248 ntBASIC6.89□□□□□ -1.31
Clrn1Q8K445 Olfr984-201ENSMUST00000056795 945 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Clrn1Q8K445 Gm15500-201ENSMUST00000071523 894 ntBASIC6.89□□□□□ -1.31
Clrn1Q8K445 Olfr740-201ENSMUST00000089838 936 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Clrn1Q8K445 Ect2-207ENSMUST00000176242 3985 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Clrn1Q8K445 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Clrn1Q8K445 Dusp3-206ENSMUST00000151678 4084 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Clrn1Q8K445 Gm14308-203ENSMUST00000119149 1458 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Clrn1Q8K445 Gm14434-202ENSMUST00000120959 1458 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Clrn1Q8K445 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Clrn1Q8K445 C79798-201ENSMUST00000131588 1793 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Clrn1Q8K445 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 95.7 ms