Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC8.22□□□□□ -1.09
Cchcr1Q8K2I2 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Cchcr1Q8K2I2 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC8.22□□□□□ -1.09
Cchcr1Q8K2I2 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Cchcr1Q8K2I2 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Cchcr1Q8K2I2 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Cchcr1Q8K2I2 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC8.22□□□□□ -1.09
Cchcr1Q8K2I2 Kel-201ENSMUST00000031899 2530 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Cchcr1Q8K2I2 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Cchcr1Q8K2I2 Trappc1-202ENSMUST00000102601 759 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Cchcr1Q8K2I2 Gm6877-201ENSMUST00000119347 1101 ntBASIC8.22□□□□□ -1.09
Cchcr1Q8K2I2 Gm26480-201ENSMUST00000122619 297 ntBASIC8.22□□□□□ -1.09
Cchcr1Q8K2I2 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC8.22□□□□□ -1.09
Cchcr1Q8K2I2 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Cchcr1Q8K2I2 Gm7393-201ENSMUST00000172650 739 ntBASIC8.22□□□□□ -1.09
Cchcr1Q8K2I2 Gm24923-201ENSMUST00000178201 88 ntBASIC8.22□□□□□ -1.09
Cchcr1Q8K2I2 Gm26812-201ENSMUST00000181647 328 ntTSL 3 BASIC8.22□□□□□ -1.09
Cchcr1Q8K2I2 Gm26528-201ENSMUST00000181965 283 ntBASIC8.22□□□□□ -1.09
Cchcr1Q8K2I2 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Cchcr1Q8K2I2 Gm6077-201ENSMUST00000196008 499 ntBASIC8.22□□□□□ -1.09
Cchcr1Q8K2I2 4921539H07Rik-201ENSMUST00000197200 2985 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Cchcr1Q8K2I2 Gm18430-201ENSMUST00000197534 682 ntBASIC8.22□□□□□ -1.09
Cchcr1Q8K2I2 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC8.22□□□□□ -1.09
Cchcr1Q8K2I2 4930568A13Rik-201ENSMUST00000199961 1061 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Cchcr1Q8K2I2 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC8.22□□□□□ -1.09
Cchcr1Q8K2I2 Gm44258-201ENSMUST00000204925 301 ntBASIC8.22□□□□□ -1.09
Cchcr1Q8K2I2 Gm44692-201ENSMUST00000207441 901 ntTSL 3 BASIC8.22□□□□□ -1.09
Cchcr1Q8K2I2 AC151901.1-201ENSMUST00000218274 180 ntBASIC8.22□□□□□ -1.09
Cchcr1Q8K2I2 Gm34215-201ENSMUST00000221599 355 ntTSL 5 BASIC8.22□□□□□ -1.09
Cchcr1Q8K2I2 AC140288.1-201ENSMUST00000226329 503 ntBASIC8.22□□□□□ -1.09
Cchcr1Q8K2I2 AC164436.1-201ENSMUST00000227074 772 ntBASIC8.22□□□□□ -1.09
Cchcr1Q8K2I2 Il1f6-201ENSMUST00000028361 883 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Cchcr1Q8K2I2 Gm25852-201ENSMUST00000082790 130 ntBASIC8.22□□□□□ -1.09
Cchcr1Q8K2I2 Gm7731-201ENSMUST00000091759 470 ntBASIC8.22□□□□□ -1.09
Cchcr1Q8K2I2 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Cchcr1Q8K2I2 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC8.22□□□□□ -1.09
Cchcr1Q8K2I2 Gm17354-201ENSMUST00000170933 3039 ntTSL 5 BASIC8.22□□□□□ -1.09
Cchcr1Q8K2I2 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
Cchcr1Q8K2I2 Olfr1122-202ENSMUST00000215371 5036 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Cchcr1Q8K2I2 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC8.22□□□□□ -1.09
Cchcr1Q8K2I2 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC8.22□□□□□ -1.09
Cchcr1Q8K2I2 Eci3-201ENSMUST00000021853 1347 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Cchcr1Q8K2I2 Gm15930-201ENSMUST00000156603 2037 ntBASIC8.22□□□□□ -1.09
Cchcr1Q8K2I2 Gm20121-201ENSMUST00000198547 1594 ntBASIC8.22□□□□□ -1.09
Cchcr1Q8K2I2 AC124414.1-201ENSMUST00000218033 2946 ntBASIC8.22□□□□□ -1.09
Cchcr1Q8K2I2 Olfr961-202ENSMUST00000219295 3374 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Cchcr1Q8K2I2 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Cchcr1Q8K2I2 Gm3555-201ENSMUST00000160287 1395 ntBASIC8.22□□□□□ -1.09
Cchcr1Q8K2I2 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
Cchcr1Q8K2I2 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.09
Cchcr1Q8K2I2 Slc7a11-201ENSMUST00000029297 9223 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Cchcr1Q8K2I2 Olfr1032-202ENSMUST00000079298 1442 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
Cchcr1Q8K2I2 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Cchcr1Q8K2I2 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Cchcr1Q8K2I2 Trpm7-201ENSMUST00000028843 6985 ntAPPRIS ALT1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Cchcr1Q8K2I2 Gm43707-201ENSMUST00000196451 3187 ntBASIC8.21□□□□□ -1.09
Cchcr1Q8K2I2 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC8.21□□□□□ -1.09
Cchcr1Q8K2I2 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Cchcr1Q8K2I2 Gm45073-201ENSMUST00000207688 4247 ntBASIC8.21□□□□□ -1.09
Cchcr1Q8K2I2 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
Cchcr1Q8K2I2 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Cchcr1Q8K2I2 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Cchcr1Q8K2I2 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
Cchcr1Q8K2I2 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Cchcr1Q8K2I2 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Cchcr1Q8K2I2 Chil4-201ENSMUST00000082219 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Cchcr1Q8K2I2 Gm7129-201ENSMUST00000117402 997 ntBASIC8.21□□□□□ -1.1
Cchcr1Q8K2I2 Gm14158-201ENSMUST00000118409 308 ntBASIC8.21□□□□□ -1.1
Cchcr1Q8K2I2 Gm12410-201ENSMUST00000124989 405 ntTSL 3 BASIC8.21□□□□□ -1.1
Cchcr1Q8K2I2 Gm15123-201ENSMUST00000138988 339 ntTSL 3 BASIC8.21□□□□□ -1.1
Cchcr1Q8K2I2 Tecr-202ENSMUST00000163837 1272 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Cchcr1Q8K2I2 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC8.21□□□□□ -1.1
Cchcr1Q8K2I2 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
Cchcr1Q8K2I2 Gm42573-201ENSMUST00000202327 478 ntBASIC8.21□□□□□ -1.1
Cchcr1Q8K2I2 Gm44643-201ENSMUST00000208542 674 ntTSL 3 BASIC8.21□□□□□ -1.1
Cchcr1Q8K2I2 Gm45666-201ENSMUST00000211474 277 ntTSL 5 BASIC8.21□□□□□ -1.1
Cchcr1Q8K2I2 AC134869.2-201ENSMUST00000225788 421 ntBASIC8.21□□□□□ -1.1
Cchcr1Q8K2I2 Gm21762-202ENSMUST00000225881 830 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Cchcr1Q8K2I2 Ino80c-201ENSMUST00000055012 909 ntTSL 5 BASIC8.21□□□□□ -1.1
Cchcr1Q8K2I2 Olfr1287-201ENSMUST00000075390 918 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Cchcr1Q8K2I2 Tmem267-201ENSMUST00000099147 910 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Cchcr1Q8K2I2 Klrc2-205ENSMUST00000145984 2811 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Cchcr1Q8K2I2 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC8.21□□□□□ -1.1
Cchcr1Q8K2I2 2610203C20Rik-215ENSMUST00000212373 1574 ntTSL 5 BASIC8.21□□□□□ -1.1
Cchcr1Q8K2I2 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Cchcr1Q8K2I2 Gm43339-201ENSMUST00000200032 1606 ntBASIC8.21□□□□□ -1.1
Cchcr1Q8K2I2 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC8.21□□□□□ -1.1
Cchcr1Q8K2I2 Gm19583-201ENSMUST00000202993 1366 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Cchcr1Q8K2I2 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
Cchcr1Q8K2I2 Gm15950-201ENSMUST00000162902 1973 ntBASIC8.21□□□□□ -1.1
Cchcr1Q8K2I2 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Cchcr1Q8K2I2 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Cchcr1Q8K2I2 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Cchcr1Q8K2I2 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Cchcr1Q8K2I2 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Cchcr1Q8K2I2 Cul5-202ENSMUST00000120122 5945 ntTSL 5 BASIC8.2□□□□□ -1.1
Cchcr1Q8K2I2 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Cchcr1Q8K2I2 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Cchcr1Q8K2I2 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
Cchcr1Q8K2I2 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms